PubMed:26408820 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/26408820","sourcedb":"PubMed","sourceid":"26408820","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/26408820","text":"Structural changes in histone H2A by methylglyoxal generate highly immunogenic amorphous aggregates with implications in auto-immune response in cancer.\nThe role of aberrant protein modifications in cancer and its diagnosis have emerged as a promising research field. Nonenzymatic glyco-oxidation of proteins under oxidative stress has been associated with carcinogenesis through advanced glycation end products (AGE)-receptors for advanced glycation end products (RAGE) axis. Modified proteins that are immunogenic and stimulate cellular and humoral immune responses are being studied to develop early detection markers of cancer. This study has probed the structural alternations; leading to the formation of adducts and aggregates, in histone H2A upon in vitro modification by methylglyoxal (MG). The immunogenicity of modified histone H2A and its binding with cancer autoantibodies was also assessed. MG induced lysine side chain modifications, blocking of free amino groups and the formation of condensed cross structures in histone H2A; and its effect was inhibited by carbonyl scavengers. It led to the adduct formation and generation of N-epsilon-(carboxyethyl)lysine (CEL) and its decomposition forms as revealed by Matrix-assisted laser desorption ionization-mass spectrometry, high-performance liquid chromatography and LC-MS. MG-H2A showed amorphous aggregate formation under electron microscopy and altered binding with DNA in circular dichroism studies. The modified histone elicited high titer immunogen-specific antibodies in rabbits when compared with the native, thus pointing toward the generation of neo-epitopes in MG-H2A. The autoantibodies derived from cancer patients exhibited enhanced binding with MG-H2A as compared with the native histone in enzyme-linked immunosorbent assay and gel retardation assay. This reflects sharing of epitopes on MG-H2A and histones in cancer patients. The neo-epitopes on H2A may be responsible for induction and elevated levels of antibodies in cancer patients. Thus, MG-H2A may be considered as potential antigenic candidate for auto-immune response in cancer.","tracks":[{"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":22,"end":33},"obj":"http://www.uniprot.org/uniprot/P04908"},{"id":"T2","span":{"begin":738,"end":749},"obj":"http://www.uniprot.org/uniprot/P04908"},{"id":"T3","span":{"begin":831,"end":842},"obj":"http://www.uniprot.org/uniprot/P04908"},{"id":"T4","span":{"begin":1030,"end":1041},"obj":"http://www.uniprot.org/uniprot/P04908"},{"id":"T5","span":{"begin":1871,"end":1887},"obj":"http://www.uniprot.org/uniprot/P04908"},{"id":"T6","span":{"begin":413,"end":416},"obj":"http://www.uniprot.org/uniprot/P51606"},{"id":"T7","span":{"begin":465,"end":469},"obj":"http://www.uniprot.org/uniprot/Q9UQ07"},{"id":"T8","span":{"begin":465,"end":469},"obj":"http://www.uniprot.org/uniprot/Q3L1R6"},{"id":"T9","span":{"begin":1177,"end":1180},"obj":"http://www.uniprot.org/uniprot/P19835"},{"id":"T10","span":{"begin":1334,"end":1336},"obj":"http://www.uniprot.org/uniprot/Q99707"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-human"},{"subj":"T2","pred":"source","obj":"uniprot-human"},{"subj":"T3","pred":"source","obj":"uniprot-human"},{"subj":"T4","pred":"source","obj":"uniprot-human"},{"subj":"T5","pred":"source","obj":"uniprot-human"},{"subj":"T6","pred":"source","obj":"uniprot-human"},{"subj":"T7","pred":"source","obj":"uniprot-human"},{"subj":"T8","pred":"source","obj":"uniprot-human"},{"subj":"T9","pred":"source","obj":"uniprot-human"},{"subj":"T10","pred":"source","obj":"uniprot-human"}]},{"project":"GlycoBiology-FMA","denotations":[{"id":"_T50","span":{"begin":1648,"end":1662},"obj":"FMAID:167180"},{"id":"_T1","span":{"begin":22,"end":29},"obj":"FMAID:74413"},{"id":"_T2","span":{"begin":22,"end":29},"obj":"FMAID:176874"},{"id":"_T3","span":{"begin":22,"end":33},"obj":"FMAID:84129"},{"id":"_T4","span":{"begin":22,"end":33},"obj":"FMAID:198090"},{"id":"_T5","span":{"begin":22,"end":33},"obj":"FMAID:84130"},{"id":"_T6","span":{"begin":22,"end":33},"obj":"FMAID:198088"},{"id":"_T7","span":{"begin":30,"end":33},"obj":"FMAID:198089"},{"id":"_T8","span":{"begin":174,"end":181},"obj":"FMAID:67257"},{"id":"_T9","span":{"begin":174,"end":181},"obj":"FMAID:165447"},{"id":"_T10","span":{"begin":300,"end":308},"obj":"FMAID:165447"},{"id":"_T11","span":{"begin":300,"end":308},"obj":"FMAID:67257"},{"id":"_T12","span":{"begin":471,"end":475},"obj":"FMAID:12520"},{"id":"_T13","span":{"begin":471,"end":475},"obj":"FMAID:101260"},{"id":"_T14","span":{"begin":486,"end":494},"obj":"FMAID:67257"},{"id":"_T15","span":{"begin":486,"end":494},"obj":"FMAID:165447"},{"id":"_T16","span":{"begin":738,"end":745},"obj":"FMAID:176874"},{"id":"_T17","span":{"begin":738,"end":745},"obj":"FMAID:74413"},{"id":"_T18","span":{"begin":738,"end":749},"obj":"FMAID:198088"},{"id":"_T19","span":{"begin":738,"end":749},"obj":"FMAID:84129"},{"id":"_T20","span":{"begin":738,"end":749},"obj":"FMAID:198090"},{"id":"_T21","span":{"begin":738,"end":749},"obj":"FMAID:84130"},{"id":"_T22","span":{"begin":746,"end":749},"obj":"FMAID:198089"},{"id":"_T23","span":{"begin":831,"end":838},"obj":"FMAID:74413"},{"id":"_T24","span":{"begin":831,"end":838},"obj":"FMAID:176874"},{"id":"_T25","span":{"begin":831,"end":842},"obj":"FMAID:84129"},{"id":"_T26","span":{"begin":831,"end":842},"obj":"FMAID:198088"},{"id":"_T27","span":{"begin":831,"end":842},"obj":"FMAID:84130"},{"id":"_T28","span":{"begin":831,"end":842},"obj":"FMAID:198090"},{"id":"_T29","span":{"begin":839,"end":842},"obj":"FMAID:198089"},{"id":"_T30","span":{"begin":871,"end":885},"obj":"FMAID:167180"},{"id":"_T31","span":{"begin":916,"end":922},"obj":"FMAID:82758"},{"id":"_T32","span":{"begin":916,"end":922},"obj":"FMAID:196747"},{"id":"_T33","span":{"begin":1030,"end":1037},"obj":"FMAID:176874"},{"id":"_T34","span":{"begin":1030,"end":1037},"obj":"FMAID:74413"},{"id":"_T35","span":{"begin":1030,"end":1041},"obj":"FMAID:84130"},{"id":"_T36","span":{"begin":1030,"end":1041},"obj":"FMAID:198090"},{"id":"_T37","span":{"begin":1030,"end":1041},"obj":"FMAID:198088"},{"id":"_T38","span":{"begin":1030,"end":1041},"obj":"FMAID:84129"},{"id":"_T39","span":{"begin":1038,"end":1041},"obj":"FMAID:198089"},{"id":"_T40","span":{"begin":1169,"end":1175},"obj":"FMAID:82758"},{"id":"_T41","span":{"begin":1169,"end":1175},"obj":"FMAID:196747"},{"id":"_T42","span":{"begin":1305,"end":1311},"obj":"FMAID:85815"},{"id":"_T43","span":{"begin":1341,"end":1344},"obj":"FMAID:198089"},{"id":"_T44","span":{"begin":1481,"end":1488},"obj":"FMAID:176874"},{"id":"_T45","span":{"begin":1481,"end":1488},"obj":"FMAID:74413"},{"id":"_T46","span":{"begin":1528,"end":1538},"obj":"FMAID:167180"},{"id":"_T47","span":{"begin":1586,"end":1594},"obj":"FMAID:50596"},{"id":"_T48","span":{"begin":1586,"end":1594},"obj":"FMAID:146304"},{"id":"_T49","span":{"begin":1639,"end":1642},"obj":"FMAID:198089"},{"id":"_T51","span":{"begin":1727,"end":1730},"obj":"FMAID:198089"},{"id":"_T52","span":{"begin":1759,"end":1766},"obj":"FMAID:176874"},{"id":"_T53","span":{"begin":1759,"end":1766},"obj":"FMAID:74413"},{"id":"_T54","span":{"begin":1871,"end":1874},"obj":"FMAID:198089"},{"id":"_T55","span":{"begin":1879,"end":1887},"obj":"FMAID:74413"},{"id":"_T56","span":{"begin":1879,"end":1887},"obj":"FMAID:176874"},{"id":"_T57","span":{"begin":1928,"end":1931},"obj":"FMAID:198089"},{"id":"_T58","span":{"begin":1988,"end":1998},"obj":"FMAID:167180"},{"id":"_T59","span":{"begin":2028,"end":2031},"obj":"FMAID:198089"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"attributes":[{"subj":"_T50","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T1","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T2","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T3","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T4","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T5","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T6","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T7","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T8","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T9","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T10","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T11","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T12","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T13","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T14","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T15","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T16","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T17","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T18","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T19","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T20","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T21","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T22","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T23","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T24","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T25","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T26","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T27","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T28","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T29","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T30","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T31","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T32","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T33","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T34","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T35","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T36","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T37","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T38","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T39","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T40","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T41","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T42","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T43","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T44","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T45","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T46","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T47","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T48","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T49","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T51","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T52","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T53","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T54","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T55","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T56","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T57","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T58","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T59","pred":"source","obj":"GlycoBiology-FMA"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":413,"end":416},"obj":"http://www.uniprot.org/uniprot/P82343"},{"id":"T2","span":{"begin":1334,"end":1336},"obj":"http://www.uniprot.org/uniprot/A6H5Y3"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"},{"subj":"T2","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":145,"end":151},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T2","span":{"begin":199,"end":205},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T3","span":{"begin":418,"end":427},"obj":"http://purl.bioontology.org/ontology/STY/T192"},{"id":"T4","span":{"begin":624,"end":630},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T5","span":{"begin":864,"end":870},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T6","span":{"begin":972,"end":978},"obj":"http://purl.bioontology.org/ontology/STY/T096"},{"id":"T7","span":{"begin":1241,"end":1246},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/62990"},{"id":"T8","span":{"begin":1388,"end":1396},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/68518"},{"id":"T9","span":{"begin":1676,"end":1682},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T10","span":{"begin":1891,"end":1897},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T11","span":{"begin":2002,"end":2008},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T12","span":{"begin":2111,"end":2117},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T2","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T6","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T7","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T8","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T9","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T10","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T11","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T12","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":152},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":153,"end":267},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":268,"end":476},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":477,"end":631},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":632,"end":799},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":800,"end":904},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":905,"end":1095},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1096,"end":1337},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1338,"end":1467},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":1468,"end":1643},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":1644,"end":1830},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":1831,"end":1907},"obj":"Sentence"},{"id":"TextSentencer_T13","span":{"begin":1908,"end":2018},"obj":"Sentence"},{"id":"TextSentencer_T14","span":{"begin":2019,"end":2118},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":152},"obj":"Sentence"},{"id":"T2","span":{"begin":153,"end":267},"obj":"Sentence"},{"id":"T3","span":{"begin":268,"end":476},"obj":"Sentence"},{"id":"T4","span":{"begin":477,"end":631},"obj":"Sentence"},{"id":"T5","span":{"begin":632,"end":799},"obj":"Sentence"},{"id":"T6","span":{"begin":800,"end":904},"obj":"Sentence"},{"id":"T7","span":{"begin":905,"end":1095},"obj":"Sentence"},{"id":"T8","span":{"begin":1096,"end":1337},"obj":"Sentence"},{"id":"T9","span":{"begin":1338,"end":1467},"obj":"Sentence"},{"id":"T10","span":{"begin":1468,"end":1643},"obj":"Sentence"},{"id":"T11","span":{"begin":1644,"end":1830},"obj":"Sentence"},{"id":"T12","span":{"begin":1831,"end":1907},"obj":"Sentence"},{"id":"T13","span":{"begin":1908,"end":2018},"obj":"Sentence"},{"id":"T14","span":{"begin":2019,"end":2118},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":152},"obj":"Sentence"},{"id":"T2","span":{"begin":153,"end":267},"obj":"Sentence"},{"id":"T3","span":{"begin":268,"end":476},"obj":"Sentence"},{"id":"T4","span":{"begin":477,"end":631},"obj":"Sentence"},{"id":"T5","span":{"begin":632,"end":799},"obj":"Sentence"},{"id":"T6","span":{"begin":800,"end":904},"obj":"Sentence"},{"id":"T7","span":{"begin":905,"end":1095},"obj":"Sentence"},{"id":"T8","span":{"begin":1096,"end":1337},"obj":"Sentence"},{"id":"T9","span":{"begin":1338,"end":1467},"obj":"Sentence"},{"id":"T10","span":{"begin":1468,"end":1643},"obj":"Sentence"},{"id":"T11","span":{"begin":1644,"end":1830},"obj":"Sentence"},{"id":"T12","span":{"begin":1831,"end":1907},"obj":"Sentence"},{"id":"T13","span":{"begin":1908,"end":2018},"obj":"Sentence"},{"id":"T14","span":{"begin":2019,"end":2118},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T10","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T11","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T12","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T13","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T14","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":126,"end":141},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T2","span":{"begin":551,"end":567},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T3","span":{"begin":174,"end":195},"obj":"http://purl.obolibrary.org/obo/GO_0036211"},{"id":"T4","span":{"begin":287,"end":308},"obj":"http://purl.obolibrary.org/obo/GO_0018158"},{"id":"T5","span":{"begin":413,"end":416},"obj":"http://purl.obolibrary.org/obo/GO_0007568"},{"id":"T6","span":{"begin":530,"end":538},"obj":"http://purl.obolibrary.org/obo/GO_0007349"},{"id":"T7","span":{"begin":543,"end":567},"obj":"http://purl.obolibrary.org/obo/GO_0002922"},{"id":"T8","span":{"begin":543,"end":567},"obj":"http://purl.obolibrary.org/obo/GO_0002921"},{"id":"T9","span":{"begin":543,"end":567},"obj":"http://purl.obolibrary.org/obo/GO_0002920"},{"id":"T10","span":{"begin":543,"end":567},"obj":"http://purl.obolibrary.org/obo/GO_0006959"},{"id":"T11","span":{"begin":589,"end":596},"obj":"http://purl.obolibrary.org/obo/GO_0032502"},{"id":"T12","span":{"begin":698,"end":707},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T13","span":{"begin":987,"end":996},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T14","span":{"begin":1117,"end":1126},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T15","span":{"begin":1372,"end":1381},"obj":"http://purl.obolibrary.org/obo/GO_0009058"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"},{"subj":"T6","pred":"source","obj":"GO-BP"},{"subj":"T7","pred":"source","obj":"GO-BP"},{"subj":"T8","pred":"source","obj":"GO-BP"},{"subj":"T9","pred":"source","obj":"GO-BP"},{"subj":"T10","pred":"source","obj":"GO-BP"},{"subj":"T11","pred":"source","obj":"GO-BP"},{"subj":"T12","pred":"source","obj":"GO-BP"},{"subj":"T13","pred":"source","obj":"GO-BP"},{"subj":"T14","pred":"source","obj":"GO-BP"},{"subj":"T15","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T1","span":{"begin":851,"end":858},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T2","span":{"begin":1420,"end":1427},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T3","span":{"begin":1711,"end":1718},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T4","span":{"begin":851,"end":858},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T5","span":{"begin":1420,"end":1427},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T6","span":{"begin":1711,"end":1718},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T7","span":{"begin":851,"end":858},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T8","span":{"begin":1420,"end":1427},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T9","span":{"begin":1711,"end":1718},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T10","span":{"begin":851,"end":858},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T11","span":{"begin":1420,"end":1427},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T12","span":{"begin":1711,"end":1718},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T13","span":{"begin":1420,"end":1436},"obj":"http://purl.obolibrary.org/obo/GO_0003677"},{"id":"T14","span":{"begin":1420,"end":1436},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T15","span":{"begin":1528,"end":1538},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T16","span":{"begin":1988,"end":1998},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T17","span":{"begin":1702,"end":1718},"obj":"http://purl.obolibrary.org/obo/GO_0035326"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-MF"},{"subj":"T2","pred":"source","obj":"GO-MF"},{"subj":"T3","pred":"source","obj":"GO-MF"},{"subj":"T4","pred":"source","obj":"GO-MF"},{"subj":"T5","pred":"source","obj":"GO-MF"},{"subj":"T6","pred":"source","obj":"GO-MF"},{"subj":"T7","pred":"source","obj":"GO-MF"},{"subj":"T8","pred":"source","obj":"GO-MF"},{"subj":"T9","pred":"source","obj":"GO-MF"},{"subj":"T10","pred":"source","obj":"GO-MF"},{"subj":"T11","pred":"source","obj":"GO-MF"},{"subj":"T12","pred":"source","obj":"GO-MF"},{"subj":"T13","pred":"source","obj":"GO-MF"},{"subj":"T14","pred":"source","obj":"GO-MF"},{"subj":"T15","pred":"source","obj":"GO-MF"},{"subj":"T16","pred":"source","obj":"GO-MF"},{"subj":"T17","pred":"source","obj":"GO-MF"}]},{"project":"EDAM-topics","denotations":[{"id":"T1","span":{"begin":67,"end":78},"obj":"http://edamontology.org/topic_2830"},{"id":"T2","span":{"begin":145,"end":151},"obj":"http://edamontology.org/topic_2640"},{"id":"T3","span":{"begin":174,"end":181},"obj":"http://edamontology.org/topic_0078"},{"id":"T4","span":{"begin":174,"end":195},"obj":"http://edamontology.org/topic_0601"},{"id":"T5","span":{"begin":174,"end":195},"obj":"http://edamontology.org/topic_3537"},{"id":"T6","span":{"begin":199,"end":205},"obj":"http://edamontology.org/topic_2640"},{"id":"T7","span":{"begin":300,"end":308},"obj":"http://edamontology.org/topic_0078"},{"id":"T8","span":{"begin":413,"end":416},"obj":"http://edamontology.org/topic_3399"},{"id":"T9","span":{"begin":486,"end":494},"obj":"http://edamontology.org/topic_0078"},{"id":"T10","span":{"begin":504,"end":515},"obj":"http://edamontology.org/topic_2830"},{"id":"T11","span":{"begin":578,"end":585},"obj":"http://edamontology.org/topic_3678"},{"id":"T12","span":{"begin":624,"end":630},"obj":"http://edamontology.org/topic_2640"},{"id":"T13","span":{"begin":637,"end":642},"obj":"http://edamontology.org/topic_3678"},{"id":"T14","span":{"begin":647,"end":653},"obj":"http://edamontology.org/topic_0632"},{"id":"T15","span":{"begin":804,"end":818},"obj":"http://edamontology.org/topic_2830"},{"id":"T16","span":{"begin":864,"end":870},"obj":"http://edamontology.org/topic_2640"},{"id":"T17","span":{"begin":1269,"end":1286},"obj":"http://edamontology.org/topic_0134"},{"id":"T18","span":{"begin":1269,"end":1286},"obj":"http://edamontology.org/topic_3520"},{"id":"T19","span":{"begin":1388,"end":1407},"obj":"http://edamontology.org/topic_0611"},{"id":"T20","span":{"begin":1397,"end":1407},"obj":"http://edamontology.org/topic_3382"},{"id":"T21","span":{"begin":1459,"end":1466},"obj":"http://edamontology.org/topic_3678"},{"id":"T22","span":{"begin":1509,"end":1518},"obj":"http://edamontology.org/topic_2830"},{"id":"T23","span":{"begin":1676,"end":1682},"obj":"http://edamontology.org/topic_2640"},{"id":"T24","span":{"begin":1891,"end":1897},"obj":"http://edamontology.org/topic_2640"},{"id":"T25","span":{"begin":2002,"end":2008},"obj":"http://edamontology.org/topic_2640"},{"id":"T26","span":{"begin":2063,"end":2072},"obj":"http://edamontology.org/topic_2830"},{"id":"T27","span":{"begin":2111,"end":2117},"obj":"http://edamontology.org/topic_2640"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-topics"},{"subj":"T2","pred":"source","obj":"EDAM-topics"},{"subj":"T3","pred":"source","obj":"EDAM-topics"},{"subj":"T4","pred":"source","obj":"EDAM-topics"},{"subj":"T5","pred":"source","obj":"EDAM-topics"},{"subj":"T6","pred":"source","obj":"EDAM-topics"},{"subj":"T7","pred":"source","obj":"EDAM-topics"},{"subj":"T8","pred":"source","obj":"EDAM-topics"},{"subj":"T9","pred":"source","obj":"EDAM-topics"},{"subj":"T10","pred":"source","obj":"EDAM-topics"},{"subj":"T11","pred":"source","obj":"EDAM-topics"},{"subj":"T12","pred":"source","obj":"EDAM-topics"},{"subj":"T13","pred":"source","obj":"EDAM-topics"},{"subj":"T14","pred":"source","obj":"EDAM-topics"},{"subj":"T15","pred":"source","obj":"EDAM-topics"},{"subj":"T16","pred":"source","obj":"EDAM-topics"},{"subj":"T17","pred":"source","obj":"EDAM-topics"},{"subj":"T18","pred":"source","obj":"EDAM-topics"},{"subj":"T19","pred":"source","obj":"EDAM-topics"},{"subj":"T20","pred":"source","obj":"EDAM-topics"},{"subj":"T21","pred":"source","obj":"EDAM-topics"},{"subj":"T22","pred":"source","obj":"EDAM-topics"},{"subj":"T23","pred":"source","obj":"EDAM-topics"},{"subj":"T24","pred":"source","obj":"EDAM-topics"},{"subj":"T25","pred":"source","obj":"EDAM-topics"},{"subj":"T26","pred":"source","obj":"EDAM-topics"},{"subj":"T27","pred":"source","obj":"EDAM-topics"}]},{"project":"EDAM-DFO","denotations":[{"id":"T1","span":{"begin":0,"end":10},"obj":"http://edamontology.org/data_0883"},{"id":"T2","span":{"begin":51,"end":59},"obj":"http://edamontology.org/operation_3429"},{"id":"T3","span":{"begin":174,"end":181},"obj":"http://edamontology.org/format_1208"},{"id":"T4","span":{"begin":174,"end":181},"obj":"http://edamontology.org/data_1467"},{"id":"T5","span":{"begin":174,"end":198},"obj":"http://edamontology.org/data_2618"},{"id":"T6","span":{"begin":300,"end":308},"obj":"http://edamontology.org/data_1467"},{"id":"T7","span":{"begin":300,"end":308},"obj":"http://edamontology.org/format_1208"},{"id":"T8","span":{"begin":486,"end":494},"obj":"http://edamontology.org/data_1467"},{"id":"T9","span":{"begin":486,"end":494},"obj":"http://edamontology.org/format_1208"},{"id":"T10","span":{"begin":603,"end":612},"obj":"http://edamontology.org/operation_2423"},{"id":"T11","span":{"begin":658,"end":668},"obj":"http://edamontology.org/data_0883"},{"id":"T12","span":{"begin":698,"end":707},"obj":"http://edamontology.org/operation_0335"},{"id":"T13","span":{"begin":698,"end":707},"obj":"http://edamontology.org/format_1915"},{"id":"T14","span":{"begin":987,"end":996},"obj":"http://edamontology.org/format_1915"},{"id":"T15","span":{"begin":987,"end":996},"obj":"http://edamontology.org/operation_0335"},{"id":"T16","span":{"begin":1016,"end":1026},"obj":"http://edamontology.org/data_0883"},{"id":"T17","span":{"begin":1016,"end":1029},"obj":"http://edamontology.org/data_1070"},{"id":"T18","span":{"begin":1117,"end":1126},"obj":"http://edamontology.org/format_1915"},{"id":"T19","span":{"begin":1117,"end":1126},"obj":"http://edamontology.org/operation_0335"},{"id":"T20","span":{"begin":1131,"end":1141},"obj":"http://edamontology.org/operation_3429"},{"id":"T21","span":{"begin":1177,"end":1180},"obj":"http://edamontology.org/format_1638"},{"id":"T22","span":{"begin":1225,"end":1231},"obj":"http://edamontology.org/data_2082"},{"id":"T23","span":{"begin":1269,"end":1286},"obj":"http://edamontology.org/data_3147"},{"id":"T24","span":{"begin":1269,"end":1286},"obj":"http://edamontology.org/data_2536"},{"id":"T25","span":{"begin":1372,"end":1381},"obj":"http://edamontology.org/format_1915"},{"id":"T26","span":{"begin":1372,"end":1381},"obj":"http://edamontology.org/operation_0335"},{"id":"T27","span":{"begin":1388,"end":1407},"obj":"http://edamontology.org/data_0941"},{"id":"T28","span":{"begin":1388,"end":1411},"obj":"http://edamontology.org/data_1079"},{"id":"T29","span":{"begin":1606,"end":1616},"obj":"http://edamontology.org/operation_3429"}],"attributes":[{"subj":"T1","pred":"source","obj":"EDAM-DFO"},{"subj":"T2","pred":"source","obj":"EDAM-DFO"},{"subj":"T3","pred":"source","obj":"EDAM-DFO"},{"subj":"T4","pred":"source","obj":"EDAM-DFO"},{"subj":"T5","pred":"source","obj":"EDAM-DFO"},{"subj":"T6","pred":"source","obj":"EDAM-DFO"},{"subj":"T7","pred":"source","obj":"EDAM-DFO"},{"subj":"T8","pred":"source","obj":"EDAM-DFO"},{"subj":"T9","pred":"source","obj":"EDAM-DFO"},{"subj":"T10","pred":"source","obj":"EDAM-DFO"},{"subj":"T11","pred":"source","obj":"EDAM-DFO"},{"subj":"T12","pred":"source","obj":"EDAM-DFO"},{"subj":"T13","pred":"source","obj":"EDAM-DFO"},{"subj":"T14","pred":"source","obj":"EDAM-DFO"},{"subj":"T15","pred":"source","obj":"EDAM-DFO"},{"subj":"T16","pred":"source","obj":"EDAM-DFO"},{"subj":"T17","pred":"source","obj":"EDAM-DFO"},{"subj":"T18","pred":"source","obj":"EDAM-DFO"},{"subj":"T19","pred":"source","obj":"EDAM-DFO"},{"subj":"T20","pred":"source","obj":"EDAM-DFO"},{"subj":"T21","pred":"source","obj":"EDAM-DFO"},{"subj":"T22","pred":"source","obj":"EDAM-DFO"},{"subj":"T23","pred":"source","obj":"EDAM-DFO"},{"subj":"T24","pred":"source","obj":"EDAM-DFO"},{"subj":"T25","pred":"source","obj":"EDAM-DFO"},{"subj":"T26","pred":"source","obj":"EDAM-DFO"},{"subj":"T27","pred":"source","obj":"EDAM-DFO"},{"subj":"T28","pred":"source","obj":"EDAM-DFO"},{"subj":"T29","pred":"source","obj":"EDAM-DFO"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":1084,"end":1094},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":1542,"end":1549},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"30848"},{"id":"A2","pred":"db_id","subj":"T2","obj":"9986"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":145,"end":151},"obj":"Disease"},{"id":"T2","span":{"begin":199,"end":205},"obj":"Disease"},{"id":"T3","span":{"begin":624,"end":630},"obj":"Disease"},{"id":"T4","span":{"begin":864,"end":870},"obj":"Disease"},{"id":"T5","span":{"begin":1177,"end":1180},"obj":"Disease"},{"id":"T6","span":{"begin":1676,"end":1682},"obj":"Disease"},{"id":"T7","span":{"begin":1891,"end":1897},"obj":"Disease"},{"id":"T8","span":{"begin":2002,"end":2008},"obj":"Disease"},{"id":"T9","span":{"begin":2111,"end":2117},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0006147"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"},{"subj":"T3","pred":"source","obj":"mondo_disease"},{"subj":"T4","pred":"source","obj":"mondo_disease"},{"subj":"T5","pred":"source","obj":"mondo_disease"},{"subj":"T6","pred":"source","obj":"mondo_disease"},{"subj":"T7","pred":"source","obj":"mondo_disease"},{"subj":"T8","pred":"source","obj":"mondo_disease"},{"subj":"T9","pred":"source","obj":"mondo_disease"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":471,"end":475},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0001093"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":145,"end":151},"obj":"Phenotype"},{"id":"T2","span":{"begin":199,"end":205},"obj":"Phenotype"},{"id":"T3","span":{"begin":315,"end":331},"obj":"Phenotype"},{"id":"T4","span":{"begin":624,"end":630},"obj":"Phenotype"},{"id":"T5","span":{"begin":864,"end":870},"obj":"Phenotype"},{"id":"T6","span":{"begin":1676,"end":1682},"obj":"Phenotype"},{"id":"T7","span":{"begin":1891,"end":1897},"obj":"Phenotype"},{"id":"T8","span":{"begin":2002,"end":2008},"obj":"Phenotype"},{"id":"T9","span":{"begin":2111,"end":2117},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0002664"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0002664"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0025464"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0002664"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"HP:0002664"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"HP:0002664"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"HP:0002664"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"HP:0002664"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"HP:0002664"},{"subj":"T1","pred":"source","obj":"HP-phenotype"},{"subj":"T2","pred":"source","obj":"HP-phenotype"},{"subj":"T3","pred":"source","obj":"HP-phenotype"},{"subj":"T4","pred":"source","obj":"HP-phenotype"},{"subj":"T5","pred":"source","obj":"HP-phenotype"},{"subj":"T6","pred":"source","obj":"HP-phenotype"},{"subj":"T7","pred":"source","obj":"HP-phenotype"},{"subj":"T8","pred":"source","obj":"HP-phenotype"},{"subj":"T9","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":1147,"end":1154},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0003025"},{"subj":"T1","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"uniprot-human","color":"#cc93ec","default":true},{"id":"GlycoBiology-FMA","color":"#93ecb2"},{"id":"uniprot-mouse","color":"#ec9893"},{"id":"GlycoBiology-NCBITAXON","color":"#93a8ec"},{"id":"sentences","color":"#c2ec93"},{"id":"GO-BP","color":"#ec93dc"},{"id":"GO-MF","color":"#93ece2"},{"id":"EDAM-topics","color":"#ecc893"},{"id":"EDAM-DFO","color":"#ae93ec"},{"id":"NCBITAXON","color":"#93ec94"},{"id":"mondo_disease","color":"#ec93ab"},{"id":"Anatomy-UBERON","color":"#93c5ec"},{"id":"HP-phenotype","color":"#dfec93"},{"id":"CL-cell","color":"#de93ec"}]}]}}