PubMed:23791840
Annnotations
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 41-45 | OrganismTaxon | denotes | mice | NCBItxid:10095|NCBItxid:10088 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-135 | Sentence | denotes | Superoxide dismutase 1 overexpression in mice abolishes maternal diabetes-induced endoplasmic reticulum stress in diabetic embryopathy. |
| T2 | 136-146 | Sentence | denotes | OBJECTIVE: |
| T3 | 147-256 | Sentence | denotes | Both oxidative stress and endoplasmic reticulum stress (ER stress) are causal events in diabetic embryopathy. |
| T4 | 257-309 | Sentence | denotes | We tested whether oxidative stress causes ER stress. |
| T5 | 310-323 | Sentence | denotes | STUDY DESIGN: |
| T6 | 324-883 | Sentence | denotes | Wild-type (WT) and superoxide dismutase 1 (SOD1)-overexpressing day 8.75 embryos from nondiabetic WT control with SOD1 transgenic male and diabetic WT female with SOD1 transgenic male were analyzed for ER stress markers: C/EBP-homologous protein (CHOP), calnexin, eukaryotic initiation factor 2α (eIF2α), protein kinase ribonucleic acid (RNA)-like ER kinase (PERK), binding immunoglobulin protein, protein disulfide isomerase family A member 3, kinases inositol-requiring protein-1α (IRE1α), and the X-box binding protein (XBP1) messenger RNA (mRNA) splicing. |
| T7 | 884-892 | Sentence | denotes | RESULTS: |
| T8 | 893-1098 | Sentence | denotes | Maternal diabetes significantly increased the levels of CHOP, calnexin, phosphorylated (p)-eIF2α, p-PERK, and p-IRE1α; triggered XBP1 mRNA splicing; and enhanced ER chaperone gene expression in WT embryos. |
| T9 | 1099-1168 | Sentence | denotes | SOD1 overexpression blocked these diabetes-induced ER stress markers. |
| T10 | 1169-1180 | Sentence | denotes | CONCLUSION: |
| T11 | 1181-1284 | Sentence | denotes | Mitigating oxidative stress via SOD1 overexpression blocks maternal diabetes-induced ER stress in vivo. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 9235 | 0-22 | GeneOrGeneProduct | denotes | Superoxide dismutase 1 | NCBIGene:20655 |
| 9236 | 41-45 | OrganismTaxon | denotes | mice | NCBITaxon:10090 |
| 9237 | 56-73 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | MESH:D016640 |
| 9238 | 114-122 | DiseaseOrPhenotypicFeature | denotes | diabetic | MESH:D003920 |
| 9239 | 123-134 | DiseaseOrPhenotypicFeature | denotes | embryopathy | MESH:D005315 |
| 9240 | 235-243 | DiseaseOrPhenotypicFeature | denotes | diabetic | MESH:D003920 |
| 9241 | 244-255 | DiseaseOrPhenotypicFeature | denotes | embryopathy | MESH:D005315 |
| 9242 | 343-365 | GeneOrGeneProduct | denotes | superoxide dismutase 1 | NCBIGene:20655 |
| 9243 | 367-371 | GeneOrGeneProduct | denotes | SOD1 | NCBIGene:20655 |
| 9244 | 438-442 | GeneOrGeneProduct | denotes | SOD1 | NCBIGene:20655 |
| 9245 | 463-471 | DiseaseOrPhenotypicFeature | denotes | diabetic | MESH:D003920 |
| 9246 | 487-491 | GeneOrGeneProduct | denotes | SOD1 | NCBIGene:20655 |
| 9247 | 545-569 | GeneOrGeneProduct | denotes | C/EBP-homologous protein | NCBIGene:13198 |
| 9248 | 571-575 | GeneOrGeneProduct | denotes | CHOP | NCBIGene:13198 |
| 9249 | 578-586 | GeneOrGeneProduct | denotes | calnexin | NCBIGene:12330 |
| 9250 | 588-619 | GeneOrGeneProduct | denotes | eukaryotic initiation factor 2α | NCBIGene:229317 |
| 9251 | 621-626 | GeneOrGeneProduct | denotes | eIF2α | NCBIGene:229317 |
| 9252 | 629-681 | GeneOrGeneProduct | denotes | protein kinase ribonucleic acid (RNA)-like ER kinase | NCBIGene:13666 |
| 9253 | 683-687 | GeneOrGeneProduct | denotes | PERK | NCBIGene:13666 |
| 9254 | 690-720 | GeneOrGeneProduct | denotes | binding immunoglobulin protein | NCBIGene:14828 |
| 9255 | 722-767 | GeneOrGeneProduct | denotes | protein disulfide isomerase family A member 3 | NCBIGene:14827 |
| 9256 | 769-806 | GeneOrGeneProduct | denotes | kinases inositol-requiring protein-1α | NCBIGene:78943 |
| 9257 | 808-813 | GeneOrGeneProduct | denotes | IRE1α | NCBIGene:78943 |
| 9258 | 824-845 | GeneOrGeneProduct | denotes | X-box binding protein | NCBIGene:22433 |
| 9259 | 847-851 | GeneOrGeneProduct | denotes | XBP1 | NCBIGene:22433 |
| 9260 | 893-910 | DiseaseOrPhenotypicFeature | denotes | Maternal diabetes | MESH:D016640 |
| 9261 | 949-953 | GeneOrGeneProduct | denotes | CHOP | NCBIGene:13198 |
| 9262 | 955-963 | GeneOrGeneProduct | denotes | calnexin | NCBIGene:12330 |
| 9263 | 984-989 | GeneOrGeneProduct | denotes | eIF2α | NCBIGene:229317 |
| 9264 | 993-997 | GeneOrGeneProduct | denotes | PERK | NCBIGene:13666 |
| 9265 | 1005-1010 | GeneOrGeneProduct | denotes | IRE1α | NCBIGene:78943 |
| 9266 | 1022-1026 | GeneOrGeneProduct | denotes | XBP1 | NCBIGene:22433 |
| 9267 | 1099-1103 | GeneOrGeneProduct | denotes | SOD1 | NCBIGene:20655 |
| 9268 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | MESH:D003920 |
| 9269 | 1213-1217 | GeneOrGeneProduct | denotes | SOD1 | NCBIGene:20655 |
| 9270 | 1240-1257 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | MESH:D016640 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 114-134 | DiseaseOrPhenotypicFeature | denotes | diabetic embryopathy | 0016018 |
| T2 | 235-255 | DiseaseOrPhenotypicFeature | denotes | diabetic embryopathy | 0016018 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-22 | GeneOrGeneProduct | denotes | Superoxide dismutase 1 |
| T2 | 41-45 | GeneOrGeneProduct | denotes | mice |
| T3 | 65-73 | GeneOrGeneProduct | denotes | diabetes |
| T4 | 74-81 | GeneOrGeneProduct | denotes | induced |
| T5 | 82-103 | GeneOrGeneProduct | denotes | endoplasmic reticulum |
| T6 | 114-122 | GeneOrGeneProduct | denotes | diabetic |
| T7 | 173-194 | GeneOrGeneProduct | denotes | endoplasmic reticulum |
| T8 | 203-205 | GeneOrGeneProduct | denotes | ER |
| T9 | 235-243 | GeneOrGeneProduct | denotes | diabetic |
| T10 | 260-266 | GeneOrGeneProduct | denotes | tested |
| T11 | 299-301 | GeneOrGeneProduct | denotes | ER |
| T12 | 343-365 | GeneOrGeneProduct | denotes | superoxide dismutase 1 |
| T13 | 367-371 | GeneOrGeneProduct | denotes | SOD1 |
| T14 | 438-442 | GeneOrGeneProduct | denotes | SOD1 |
| T15 | 454-458 | GeneOrGeneProduct | denotes | male |
| T16 | 463-471 | GeneOrGeneProduct | denotes | diabetic |
| T17 | 487-491 | GeneOrGeneProduct | denotes | SOD1 |
| T18 | 503-507 | GeneOrGeneProduct | denotes | male |
| T19 | 526-528 | GeneOrGeneProduct | denotes | ER |
| T20 | 545-550 | GeneOrGeneProduct | denotes | C/EBP |
| T21 | 551-561 | GeneOrGeneProduct | denotes | homologous |
| T22 | 562-569 | GeneOrGeneProduct | denotes | protein |
| T23 | 571-575 | GeneOrGeneProduct | denotes | CHOP |
| T24 | 578-586 | GeneOrGeneProduct | denotes | calnexin |
| T25 | 588-616 | GeneOrGeneProduct | denotes | eukaryotic initiation factor |
| T26 | 621-625 | GeneOrGeneProduct | denotes | eIF2 |
| T27 | 629-643 | GeneOrGeneProduct | denotes | protein kinase |
| T28 | 656-660 | GeneOrGeneProduct | denotes | acid |
| T29 | 667-671 | GeneOrGeneProduct | denotes | like |
| T30 | 672-674 | GeneOrGeneProduct | denotes | ER |
| T31 | 675-681 | GeneOrGeneProduct | denotes | kinase |
| T32 | 683-687 | GeneOrGeneProduct | denotes | PERK |
| T33 | 690-697 | GeneOrGeneProduct | denotes | binding |
| T34 | 698-712 | GeneOrGeneProduct | denotes | immunoglobulin |
| T35 | 713-720 | GeneOrGeneProduct | denotes | protein |
| T36 | 722-758 | GeneOrGeneProduct | denotes | protein disulfide isomerase family A |
| T37 | 759-767 | GeneOrGeneProduct | denotes | member 3 |
| T38 | 769-776 | GeneOrGeneProduct | denotes | kinases |
| T39 | 777-785 | GeneOrGeneProduct | denotes | inositol |
| T40 | 796-803 | GeneOrGeneProduct | denotes | protein |
| T41 | 808-812 | GeneOrGeneProduct | denotes | IRE1 |
| T42 | 824-845 | GeneOrGeneProduct | denotes | X-box binding protein |
| T43 | 847-851 | GeneOrGeneProduct | denotes | XBP1 |
| T44 | 868-872 | GeneOrGeneProduct | denotes | mRNA |
| T45 | 874-882 | GeneOrGeneProduct | denotes | splicing |
| T46 | 902-910 | GeneOrGeneProduct | denotes | diabetes |
| T47 | 949-953 | GeneOrGeneProduct | denotes | CHOP |
| T48 | 955-963 | GeneOrGeneProduct | denotes | calnexin |
| T49 | 984-988 | GeneOrGeneProduct | denotes | eIF2 |
| T50 | 993-997 | GeneOrGeneProduct | denotes | PERK |
| T51 | 1005-1009 | GeneOrGeneProduct | denotes | IRE1 |
| T52 | 1022-1026 | GeneOrGeneProduct | denotes | XBP1 |
| T53 | 1027-1031 | GeneOrGeneProduct | denotes | mRNA |
| T54 | 1032-1045 | GeneOrGeneProduct | denotes | splicing; and |
| T55 | 1055-1057 | GeneOrGeneProduct | denotes | ER |
| T56 | 1058-1067 | GeneOrGeneProduct | denotes | chaperone |
| T57 | 1099-1103 | GeneOrGeneProduct | denotes | SOD1 |
| T58 | 1119-1126 | GeneOrGeneProduct | denotes | blocked |
| T59 | 1133-1141 | GeneOrGeneProduct | denotes | diabetes |
| T60 | 1142-1149 | GeneOrGeneProduct | denotes | induced |
| T61 | 1150-1152 | GeneOrGeneProduct | denotes | ER |
| T62 | 1213-1217 | GeneOrGeneProduct | denotes | SOD1 |
| T63 | 1233-1239 | GeneOrGeneProduct | denotes | blocks |
| T64 | 1249-1257 | GeneOrGeneProduct | denotes | diabetes |
| T65 | 1258-1265 | GeneOrGeneProduct | denotes | induced |
| T66 | 1266-1268 | GeneOrGeneProduct | denotes | ER |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-22 | GeneOrGeneProduct | denotes | Superoxide dismutase 1 |
| T2 | 65-73 | GeneOrGeneProduct | denotes | diabetes |
| T3 | 82-103 | GeneOrGeneProduct | denotes | endoplasmic reticulum |
| T4 | 173-194 | GeneOrGeneProduct | denotes | endoplasmic reticulum |
| T5 | 343-365 | GeneOrGeneProduct | denotes | superoxide dismutase 1 |
| T6 | 367-371 | GeneOrGeneProduct | denotes | SOD1 |
| T7 | 438-442 | GeneOrGeneProduct | denotes | SOD1 |
| T8 | 487-491 | GeneOrGeneProduct | denotes | SOD1 |
| T9 | 545-550 | GeneOrGeneProduct | denotes | C/EBP |
| T10 | 562-569 | GeneOrGeneProduct | denotes | protein |
| T11 | 571-575 | GeneOrGeneProduct | denotes | CHOP |
| T12 | 578-586 | GeneOrGeneProduct | denotes | calnexin |
| T13 | 588-616 | GeneOrGeneProduct | denotes | eukaryotic initiation factor |
| T14 | 621-625 | GeneOrGeneProduct | denotes | eIF2 |
| T15 | 629-643 | GeneOrGeneProduct | denotes | protein kinase |
| T16 | 656-660 | GeneOrGeneProduct | denotes | acid |
| T17 | 667-671 | GeneOrGeneProduct | denotes | like |
| T18 | 675-681 | GeneOrGeneProduct | denotes | kinase |
| T19 | 683-687 | GeneOrGeneProduct | denotes | PERK |
| T20 | 690-697 | GeneOrGeneProduct | denotes | binding |
| T21 | 698-712 | GeneOrGeneProduct | denotes | immunoglobulin |
| T22 | 713-720 | GeneOrGeneProduct | denotes | protein |
| T23 | 722-758 | GeneOrGeneProduct | denotes | protein disulfide isomerase family A |
| T24 | 759-767 | GeneOrGeneProduct | denotes | member 3 |
| T25 | 777-785 | GeneOrGeneProduct | denotes | inositol |
| T26 | 796-803 | GeneOrGeneProduct | denotes | protein |
| T27 | 808-812 | GeneOrGeneProduct | denotes | IRE1 |
| T28 | 824-845 | GeneOrGeneProduct | denotes | X-box binding protein |
| T29 | 847-851 | GeneOrGeneProduct | denotes | XBP1 |
| T30 | 868-872 | GeneOrGeneProduct | denotes | mRNA |
| T31 | 902-910 | GeneOrGeneProduct | denotes | diabetes |
| T32 | 949-953 | GeneOrGeneProduct | denotes | CHOP |
| T33 | 955-963 | GeneOrGeneProduct | denotes | calnexin |
| T34 | 984-988 | GeneOrGeneProduct | denotes | eIF2 |
| T35 | 993-997 | GeneOrGeneProduct | denotes | PERK |
| T36 | 1005-1009 | GeneOrGeneProduct | denotes | IRE1 |
| T37 | 1022-1026 | GeneOrGeneProduct | denotes | XBP1 |
| T38 | 1027-1031 | GeneOrGeneProduct | denotes | mRNA |
| T39 | 1058-1067 | GeneOrGeneProduct | denotes | chaperone |
| T40 | 1099-1103 | GeneOrGeneProduct | denotes | SOD1 |
| T41 | 1119-1126 | GeneOrGeneProduct | denotes | blocked |
| T42 | 1133-1141 | GeneOrGeneProduct | denotes | diabetes |
| T43 | 1213-1217 | GeneOrGeneProduct | denotes | SOD1 |
| T44 | 1249-1257 | GeneOrGeneProduct | denotes | diabetes |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T1 | 65-73 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T2 | 114-122 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T3 | 123-134 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T4 | 235-243 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T5 | 244-255 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T6 | 463-471 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T7 | 902-910 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T8 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T9 | 1249-1257 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-22 | GeneOrGeneProduct | denotes | Superoxide dismutase 1 |
| T2 | 343-365 | GeneOrGeneProduct | denotes | superoxide dismutase 1 |
| T3 | 367-371 | GeneOrGeneProduct | denotes | SOD1 |
| T4 | 438-442 | GeneOrGeneProduct | denotes | SOD1 |
| T5 | 487-491 | GeneOrGeneProduct | denotes | SOD1 |
| T6 | 545-550 | GeneOrGeneProduct | denotes | C/EBP |
| T7 | 571-575 | GeneOrGeneProduct | denotes | CHOP |
| T8 | 578-586 | GeneOrGeneProduct | denotes | calnexin |
| T9 | 588-616 | GeneOrGeneProduct | denotes | eukaryotic initiation factor |
| T10 | 621-625 | GeneOrGeneProduct | denotes | eIF2 |
| T11 | 629-643 | GeneOrGeneProduct | denotes | protein kinase |
| T12 | 683-687 | GeneOrGeneProduct | denotes | PERK |
| T13 | 698-712 | GeneOrGeneProduct | denotes | immunoglobulin |
| T14 | 722-758 | GeneOrGeneProduct | denotes | protein disulfide isomerase family A |
| T15 | 759-767 | GeneOrGeneProduct | denotes | member 3 |
| T16 | 777-805 | GeneOrGeneProduct | denotes | inositol-requiring protein-1 |
| T17 | 808-812 | GeneOrGeneProduct | denotes | IRE1 |
| T18 | 824-845 | GeneOrGeneProduct | denotes | X-box binding protein |
| T19 | 847-851 | GeneOrGeneProduct | denotes | XBP1 |
| T20 | 949-953 | GeneOrGeneProduct | denotes | CHOP |
| T21 | 955-963 | GeneOrGeneProduct | denotes | calnexin |
| T22 | 984-988 | GeneOrGeneProduct | denotes | eIF2 |
| T23 | 993-997 | GeneOrGeneProduct | denotes | PERK |
| T24 | 1005-1009 | GeneOrGeneProduct | denotes | IRE1 |
| T25 | 1022-1026 | GeneOrGeneProduct | denotes | XBP1 |
| T26 | 1058-1067 | GeneOrGeneProduct | denotes | chaperone |
| T27 | 1099-1103 | GeneOrGeneProduct | denotes | SOD1 |
| T28 | 1213-1217 | GeneOrGeneProduct | denotes | SOD1 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 65-73 | DiseaseOrPhenotypicFeature | denotes | diabetes | 0005015 |
| T2 | 114-134 | DiseaseOrPhenotypicFeature | denotes | diabetic embryopathy | 0016018 |
| T3 | 235-255 | DiseaseOrPhenotypicFeature | denotes | diabetic embryopathy | 0016018 |
| T4 | 902-910 | DiseaseOrPhenotypicFeature | denotes | diabetes | 0005015 |
| T5 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | 0005015 |
| T6 | 1249-1257 | DiseaseOrPhenotypicFeature | denotes | diabetes | 0005015 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 56-73 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE |
| T2 | 114-122 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T3 | 123-134 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T4 | 235-243 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T5 | 244-255 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T6 | 463-471 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T7 | 893-910 | DiseaseOrPhenotypicFeature | denotes | Maternal diabetes | DISEASE |
| T8 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T9 | 1240-1257 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 56-73 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE |
| T2 | 114-122 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T3 | 123-134 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T4 | 235-243 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T5 | 244-255 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 |
| T6 | 463-471 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T7 | 893-910 | DiseaseOrPhenotypicFeature | denotes | Maternal diabetes | DISEASE |
| T8 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T9 | 1240-1257 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 0-22 | ChemicalEntity | denotes | Superoxide dismutase 1 | D000072105 |
| T2 | 343-365 | ChemicalEntity | denotes | superoxide dismutase 1 | D000072105 |
| T3 | 367-371 | ChemicalEntity | denotes | SOD1 | D000072105 |
| T4 | 438-442 | ChemicalEntity | denotes | SOD1 | D000072105 |
| T5 | 487-491 | ChemicalEntity | denotes | SOD1 | D000072105 |
| T6 | 644-660 | ChemicalEntity | denotes | ribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T7 | 662-665 | ChemicalEntity | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T8 | 683-687 | ChemicalEntity | denotes | PERK | http://purl.obolibrary.org/obo/CHEBI_17300 |
| T9 | 722-749 | ChemicalEntity | denotes | protein disulfide isomerase | D019704 |
| T10 | 777-785 | ChemicalEntity | denotes | inositol | D007294|http://purl.obolibrary.org/obo/CHEBI_24848 |
| T12 | 863-866 | ChemicalEntity | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T13 | 993-997 | ChemicalEntity | denotes | PERK | http://purl.obolibrary.org/obo/CHEBI_17300 |
| T14 | 1099-1103 | ChemicalEntity | denotes | SOD1 | D000072105 |
| T15 | 1213-1217 | ChemicalEntity | denotes | SOD1 | D000072105 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 41-45 | OrganismTaxon | denotes | mice |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T15 | 1213-1217 | ChemicalEntity | denotes | SOD1 | D000072105 | |
| T14 | 1099-1103 | ChemicalEntity | denotes | SOD1 | D000072105 | |
| T13 | 993-997 | ChemicalEntity | denotes | PERK | http://purl.obolibrary.org/obo/CHEBI_17300 | |
| T12 | 863-866 | ChemicalEntity | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 | |
| T10 | 777-785 | ChemicalEntity | denotes | inositol | http://purl.obolibrary.org/obo/CHEBI_24848|D007294 | |
| T9 | 722-749 | ChemicalEntity | denotes | protein disulfide isomerase | D019704 | |
| T8 | 683-687 | ChemicalEntity | denotes | PERK | http://purl.obolibrary.org/obo/CHEBI_17300 | |
| T7 | 662-665 | ChemicalEntity | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 | |
| T6 | 644-660 | ChemicalEntity | denotes | ribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_33697 | |
| T5 | 487-491 | ChemicalEntity | denotes | SOD1 | D000072105 | |
| T4 | 438-442 | ChemicalEntity | denotes | SOD1 | D000072105 | |
| T3 | 367-371 | ChemicalEntity | denotes | SOD1 | D000072105 | |
| T2 | 343-365 | ChemicalEntity | denotes | superoxide dismutase 1 | D000072105 | |
| T1 | 0-22 | ChemicalEntity | denotes | Superoxide dismutase 1 | D000072105 | |
| T28 | 1213-1217 | GeneOrGeneProduct | denotes | SOD1 | ||
| T27 | 1099-1103 | GeneOrGeneProduct | denotes | SOD1 | ||
| T26 | 1058-1067 | GeneOrGeneProduct | denotes | chaperone | ||
| T25 | 1022-1026 | GeneOrGeneProduct | denotes | XBP1 | ||
| T24 | 1005-1009 | GeneOrGeneProduct | denotes | IRE1 | ||
| T23 | 993-997 | GeneOrGeneProduct | denotes | PERK | ||
| T22 | 984-988 | GeneOrGeneProduct | denotes | eIF2 | ||
| T21 | 955-963 | GeneOrGeneProduct | denotes | calnexin | ||
| T20 | 949-953 | GeneOrGeneProduct | denotes | CHOP | ||
| T19 | 847-851 | GeneOrGeneProduct | denotes | XBP1 | ||
| T18 | 824-845 | GeneOrGeneProduct | denotes | X-box binding protein | ||
| T17 | 808-812 | GeneOrGeneProduct | denotes | IRE1 | ||
| T16 | 777-805 | GeneOrGeneProduct | denotes | inositol-requiring protein-1 | ||
| T84070 | 759-767 | GeneOrGeneProduct | denotes | member 3 | ||
| T10519 | 722-758 | GeneOrGeneProduct | denotes | protein disulfide isomerase family A | ||
| T673 | 698-712 | GeneOrGeneProduct | denotes | immunoglobulin | ||
| T21440 | 683-687 | GeneOrGeneProduct | denotes | PERK | ||
| T11 | 629-643 | GeneOrGeneProduct | denotes | protein kinase | ||
| T53950 | 621-625 | GeneOrGeneProduct | denotes | eIF2 | ||
| T21924 | 588-616 | GeneOrGeneProduct | denotes | eukaryotic initiation factor | ||
| T70538 | 578-586 | GeneOrGeneProduct | denotes | calnexin | ||
| T8215 | 571-575 | GeneOrGeneProduct | denotes | CHOP | ||
| T67309 | 545-550 | GeneOrGeneProduct | denotes | C/EBP | ||
| T99707 | 487-491 | GeneOrGeneProduct | denotes | SOD1 | ||
| T37806 | 438-442 | GeneOrGeneProduct | denotes | SOD1 | ||
| T81519 | 367-371 | GeneOrGeneProduct | denotes | SOD1 | ||
| T38298 | 343-365 | GeneOrGeneProduct | denotes | superoxide dismutase 1 | ||
| T21114 | 0-22 | GeneOrGeneProduct | denotes | Superoxide dismutase 1 | ||
| T45100 | 1240-1257 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE | |
| T54591 | 1133-1141 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE | |
| T76743 | 893-910 | DiseaseOrPhenotypicFeature | denotes | Maternal diabetes | DISEASE | |
| T85146 | 463-471 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE | |
| T34699 | 244-255 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 | |
| T48419 | 235-243 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE | |
| T59342 | 123-134 | DiseaseOrPhenotypicFeature | denotes | embryopathy | D005315 | |
| T97727 | 114-122 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE | |
| T81558 | 56-73 | DiseaseOrPhenotypicFeature | denotes | maternal diabetes | DISEASE | |
| T57592 | 41-45 | OrganismTaxon | denotes | mice |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_23791840_2_0 | 173-201 | expanded | denotes | endoplasmic reticulum stress |
| SS2_23791840_2_0 | 203-212 | abbr | denotes | ER stress |
| SS1_23791840_5_0 | 324-333 | expanded | denotes | Wild-type |
| SS2_23791840_5_0 | 335-337 | abbr | denotes | WT |
| SS1_23791840_5_1 | 343-365 | expanded | denotes | superoxide dismutase 1 |
| SS2_23791840_5_1 | 367-371 | abbr | denotes | SOD1 |
| SS1_23791840_5_2 | 545-569 | expanded | denotes | C/EBP-homologous protein |
| SS2_23791840_5_2 | 571-575 | abbr | denotes | CHOP |
| SS1_23791840_5_3 | 588-619 | expanded | denotes | eukaryotic initiation factor 2α |
| SS2_23791840_5_3 | 621-626 | abbr | denotes | eIF2α |
| SS1_23791840_5_4 | 644-660 | expanded | denotes | ribonucleic acid |
| SS2_23791840_5_4 | 662-665 | abbr | denotes | RNA |
| SS1_23791840_5_5 | 777-806 | expanded | denotes | inositol-requiring protein-1α |
| SS2_23791840_5_5 | 808-813 | abbr | denotes | IRE1α |
| SS1_23791840_5_6 | 853-866 | expanded | denotes | messenger RNA |
| SS2_23791840_5_6 | 868-872 | abbr | denotes | mRNA |
| AE1_23791840_2_0 | SS1_23791840_2_0 | SS2_23791840_2_0 | abbreviatedTo | endoplasmic reticulum stress,ER stress |
| AE1_23791840_5_0 | SS1_23791840_5_0 | SS2_23791840_5_0 | abbreviatedTo | Wild-type,WT |
| AE1_23791840_5_1 | SS1_23791840_5_1 | SS2_23791840_5_1 | abbreviatedTo | superoxide dismutase 1,SOD1 |
| AE1_23791840_5_2 | SS1_23791840_5_2 | SS2_23791840_5_2 | abbreviatedTo | C/EBP-homologous protein,CHOP |
| AE1_23791840_5_3 | SS1_23791840_5_3 | SS2_23791840_5_3 | abbreviatedTo | eukaryotic initiation factor 2α,eIF2α |
| AE1_23791840_5_4 | SS1_23791840_5_4 | SS2_23791840_5_4 | abbreviatedTo | ribonucleic acid,RNA |
| AE1_23791840_5_5 | SS1_23791840_5_5 | SS2_23791840_5_5 | abbreviatedTo | inositol-requiring protein-1α,IRE1α |
| AE1_23791840_5_6 | SS1_23791840_5_6 | SS2_23791840_5_6 | abbreviatedTo | messenger RNA,mRNA |