PubMed:237552
Annnotations
Test-Species-PubTator
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 4 | 16-33 | Chemical | denotes | G-M-1-ganglioside | MESH:D005677 |
| 5 | 38-56 | Chemical | denotes | ceramide lactoside | MESH:C009744 |
| 6 | 57-75 | Gene | denotes | beta-galactosidase | 2720 |
| 7 | 81-87 | Species | denotes | rabbit | 9986 |
| 35 | 105-123 | Gene | denotes | beta-galactosidase | 2720 |
| 36 | 127-133 | Species | denotes | rabbit | 9986 |
| 37 | 193-210 | Chemical | denotes | G-M-1-ganglioside | MESH:D005677 |
| 38 | 308-316 | Chemical | denotes | ceramide | MESH:D002518 |
| 39 | 318-323 | Chemical | denotes | G-M-1 | MESH:D005677 |
| 40 | 330-351 | Species | denotes | Tay Sachs ganglioside | |
| 41 | 428-436 | Chemical | denotes | ceramide | MESH:D002518 |
| 42 | 438-455 | Chemical | denotes | G-M-2-ganglioside | MESH:D005678 |
| 43 | 461-479 | Chemical | denotes | ceramide lactoside | MESH:C009744 |
| 44 | 512-520 | Chemical | denotes | ceramide | MESH:D002518 |
| 45 | 522-533 | Chemical | denotes | Gal-Glc-Cer | - |
| 46 | 540-556 | Chemical | denotes | glucocerebroside | MESH:D005963 |
| 47 | 569-577 | Chemical | denotes | ceramide | MESH:D002518 |
| 48 | 579-586 | Chemical | denotes | Glc-Cer | - |
| 49 | 641-648 | Chemical | denotes | NPh-Gal | - |
| 50 | 653-662 | Chemical | denotes | MeUmb-Gal | - |
| 51 | 699-713 | Chemical | denotes | Sephadex G-200 | MESH:C025614 |
| 52 | 850-867 | Chemical | denotes | G-M-1-ganglioside | MESH:D005677 |
| 53 | 872-883 | Chemical | denotes | Gal-Glc-Cer | - |
| 54 | 887-901 | Chemical | denotes | polyacrylamide | MESH:C016679 |
| 55 | 946-951 | Chemical | denotes | G-M-1 | MESH:D005677 |
| 56 | 978-985 | Chemical | denotes | acetate | MESH:D000085 |
| 57 | 1030-1041 | Chemical | denotes | Gal-Glc-Cer | - |
| 58 | 1165-1189 | Chemical | denotes | gamma-D-galactonolactone | - |
| 59 | 1191-1202 | Chemical | denotes | D-galactose | MESH:D005690 |
| 60 | 1207-1214 | Chemical | denotes | lactose | MESH:D007785 |
| 61 | 1256-1274 | Gene | denotes | beta-galactosidase | 2720 |
Test-Species-PubDictionaries-PubMedBERT
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 22-33 | Species | denotes | ganglioside | 2904946 |
| T2 | 81-87 | Species | denotes | rabbit | 9986 |
| T3 | 99-104 | Species | denotes | major | 1925465 |
| T4 | 127-133 | Species | denotes | rabbit | 9986 |
| T5 | 199-210 | Species | denotes | ganglioside | 2904946 |
| T6 | 330-339 | Species | denotes | Tay Sachs | 442234 |
| T7 | 340-351 | Species | denotes | ganglioside | 2904946 |
| T8 | 444-455 | Species | denotes | ganglioside | 2904946 |
| T9 | 600-604 | Species | denotes | also | 209674 |
| T10 | 856-867 | Species | denotes | ganglioside | 2904946 |
| T11 | 1220-1224 | Species | denotes | data | 1369087 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 88-93 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
| T2 | 134-139 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 16-21 | Glycan | denotes | G-M-1 | |
| T2 | 193-198 | Glycan | denotes | G-M-1 | |
| T3 | 232-238 | Glycan | denotes | GalNAc | |
| T4 | 318-323 | Glycan | denotes | G-M-1 | |
| T5 | 352-358 | Glycan | denotes | GalNAc | |
| T6 | 438-443 | Glycan | denotes | G-M-2 | |
| T7 | 850-855 | Glycan | denotes | G-M-1 | |
| T8 | 946-951 | Glycan | denotes | G-M-1 | |
| T9 | 1207-1214 | Glycan | denotes | lactose |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 232-238 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T2 | 352-358 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T3 | 1207-1214 | Glycan | denotes | lactose | https://api.glycosmos.org/wurcs2image/latest/png/binary/G15541SE |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 88-93 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T3 | 134-139 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-94 | Sentence | denotes | Purification of G-M-1-ganglioside and ceramide lactoside beta-galactosidase from rabbit brain. |
| T2 | 95-172 | Sentence | denotes | The major beta-galactosidase of rabbit brain has been purified over 400-fold. |
| T3 | 173-588 | Sentence | denotes | The enzyme converts G-M-1-ganglioside; Gal beta-1 yields 3 GalNAc beta-1 yields 4 (NANalpha-2 yields 3) Gal beta-1 yields 4 Glc yields ceramide (G-M-1) into Tay Sachs ganglioside GalNAc beta-1 yields 4 (NANalpha-2 yields 3) Gal beta-1 yields 4 Glc yields ceramide (G-M-2-ganglioside) and ceramide lactoside, Gal beta-1 yields 4 Glc yields ceramide (Gal-Glc-Cer) into glucocerebroside, Glc yields ceramide (Glc-Cer). |
| T4 | 589-806 | Sentence | denotes | The enzyme also hydrolyzes the synthetic substrates NPh-Gal and MeUmb-Gal. It is eluted as a single peak from Sephadex G-200 columns when natural and synthetic substrates were used and has an isoelectric point of 6.3. |
| T5 | 807-940 | Sentence | denotes | We were unable to resolve activity towards G-M-1-ganglioside and Gal-Glc-Cer by polyacrylamide electrophoresis in two buffer systems. |
| T6 | 941-1095 | Sentence | denotes | With G-M-1 the pH optimum was 4.3 in acetate buffer and the K-m value 78 mu-M while with Gal-Glc-Cer, a pH optimum of 4.5 and a K-m of 17 mu-M were found. |
| T7 | 1096-1215 | Sentence | denotes | Hydrolysis of both natural and synthetic substrates was inhibited by gamma-D-galactonolactone, D-galactose and lactose. |
| T8 | 1216-1312 | Sentence | denotes | The data strongly suggest that a single beta-galactosidase hydrolyzes all the substrates tested. |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 88-93 | Body_part | denotes | brain | FMA:50801 |
| T2 | 134-139 | Body_part | denotes | brain | FMA:50801 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 88-93 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
| T2 | 134-139 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 88-93 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T3 | 134-139 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |