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PubMed:23418199 / 542-769 JSONTXT

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Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T2 46-50 http://purl.obolibrary.org/obo/MAT_0000135 denotes lung

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T4 0-227 Sentence denotes We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs).
T4 0-227 Sentence denotes We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs).
T4 0-227 Sentence denotes We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs).

DisGeNET

Id Subject Object Predicate Lexical cue
T20 14-19 gene:55959 denotes Sulf2
T21 84-113 disease:C3812887 denotes idiopathic pulmonary fibrosis
T22 125-130 gene:55959 denotes Sulf2
T23 115-118 disease:C3812887 denotes IPF
T24 14-19 gene:55959 denotes Sulf2
T25 115-118 disease:C1800706 denotes IPF
T26 14-19 gene:55959 denotes Sulf2
T27 84-113 disease:C1800706 denotes idiopathic pulmonary fibrosis
T28 14-19 gene:55959 denotes Sulf2
T29 115-118 disease:C3812887 denotes IPF
T30 125-130 gene:55959 denotes Sulf2
T31 84-113 disease:C3812887 denotes idiopathic pulmonary fibrosis
T32 125-130 gene:55959 denotes Sulf2
T33 84-113 disease:C1800706 denotes idiopathic pulmonary fibrosis
T34 125-130 gene:55959 denotes Sulf2
T35 115-118 disease:C1800706 denotes IPF
R11 T20 T21 associated_with Sulf2,idiopathic pulmonary fibrosis
R12 T22 T23 associated_with Sulf2,IPF
R13 T24 T25 associated_with Sulf2,IPF
R14 T26 T27 associated_with Sulf2,idiopathic pulmonary fibrosis
R15 T28 T29 associated_with Sulf2,IPF
R16 T30 T31 associated_with Sulf2,idiopathic pulmonary fibrosis
R17 T32 T33 associated_with Sulf2,idiopathic pulmonary fibrosis
R18 T34 T35 associated_with Sulf2,IPF

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T17 46-50 FMAID:7195 denotes lung
_T18 46-50 FMAID:169341 denotes lung
_T19 46-50 FMAID:93670 denotes lung
_T20 95-104 FMAID:66326 denotes pulmonary
_T21 95-104 FMAID:171535 denotes pulmonary
_T22 131-138 FMAID:165447 denotes protein
_T23 131-138 FMAID:67257 denotes protein
_T24 186-219 FMAID:167082 denotes type II alveolar epithelial cells
_T25 186-219 FMAID:62501 denotes type II alveolar epithelial cells
_T26 186-219 FMAID:62500 denotes type II alveolar epithelial cells
_T27 186-219 FMAID:167081 denotes type II alveolar epithelial cells
_T28 186-219 FMAID:166735 denotes type II alveolar epithelial cells
_T29 186-219 FMAID:166736 denotes type II alveolar epithelial cells
_T30 194-202 FMAID:264783 denotes alveolar
_T31 194-202 FMAID:242016 denotes alveolar
_T32 194-219 FMAID:62499 denotes alveolar epithelial cells
_T33 194-219 FMAID:166730 denotes alveolar epithelial cells
_T34 203-219 FMAID:67559 denotes epithelial cells
_T35 203-219 FMAID:83514 denotes epithelial cells
_T36 203-219 FMAID:165731 denotes epithelial cells
_T37 203-219 FMAID:169653 denotes epithelial cells
_T38 203-219 FMAID:66768 denotes epithelial cells
_T39 203-219 FMAID:197786 denotes epithelial cells
_T40 203-219 FMAID:69074 denotes epithelial cells
_T41 203-219 FMAID:164922 denotes epithelial cells
_T42 203-219 FMAID:69075 denotes epithelial cells
_T43 203-219 FMAID:169652 denotes epithelial cells
_T44 203-219 FMAID:165528 denotes epithelial cells
_T45 203-219 FMAID:67799 denotes epithelial cells
_T46 214-219 FMAID:169002 denotes cells
_T47 214-219 FMAID:68646 denotes cells

uniprot-mouse

Id Subject Object Predicate Lexical cue
T4 14-19 http://www.uniprot.org/uniprot/Q9D8E2 denotes Sulf2
T5 125-130 http://www.uniprot.org/uniprot/Q9D8E2 denotes Sulf2

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T5 95-104 http://purl.bioontology.org/ontology/NCBITAXON/136615 denotes pulmonary
T6 214-219 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T6 156-165 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7 194-202 http://purl.obolibrary.org/obo/GO_0048286 denotes alveolar

GO-CC

Id Subject Object Predicate Lexical cue
T1 214-219 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T2 46-50 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung

EDAM-topics

Id Subject Object Predicate Lexical cue
T3 51-58 http://edamontology.org/topic_3277 denotes samples
T4 64-69 http://edamontology.org/topic_2815 denotes human
T5 131-138 http://edamontology.org/topic_0078 denotes protein

EDAM-DFO

Id Subject Object Predicate Lexical cue
T3 131-138 http://edamontology.org/data_1467 denotes protein
T4 131-138 http://edamontology.org/format_1208 denotes protein

Allie

Id Subject Object Predicate Lexical cue
SS1_23418199_3_0 84-113 expanded denotes idiopathic pulmonary fibrosis
SS2_23418199_3_0 115-118 abbr denotes IPF
SS1_23418199_3_1 194-219 expanded denotes alveolar epithelial cells
SS2_23418199_3_1 221-225 abbr denotes AECs
AE1_23418199_3_0 SS1_23418199_3_0 SS2_23418199_3_0 abbreviatedTo idiopathic pulmonary fibrosis,IPF
AE1_23418199_3_1 SS1_23418199_3_1 SS2_23418199_3_1 abbreviatedTo alveolar epithelial cells,AECs

PubmedHPO

Id Subject Object Predicate Lexical cue
T3 95-113 HP_0002206 denotes pulmonary fibrosis

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T2 46-50 http://purl.obolibrary.org/obo/MAT_0000135 denotes lung

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T2 46-50 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T2 46-50 Body_part denotes lung http://purl.obolibrary.org/obo/MAT_0000135

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T4 84-113 Disease denotes idiopathic pulmonary fibrosis http://purl.obolibrary.org/obo/MONDO_0008345
T5 115-118 Disease denotes IPF http://purl.obolibrary.org/obo/MONDO_0002429|http://purl.obolibrary.org/obo/MONDO_0008345
T7 173-185 Disease denotes hyperplastic http://purl.obolibrary.org/obo/MONDO_0005043

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T2 64-69 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 46-50 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 186-219 Body_part denotes type II alveolar epithelial cells http://purl.obolibrary.org/obo/CL_0002063
T5 221-225 Body_part denotes AECs http://purl.obolibrary.org/obo/CL_0000322

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T4 95-113 Phenotype denotes pulmonary fibrosis HP:0002206

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T2 186-219 Cell denotes type II alveolar epithelial cells http://purl.obolibrary.org/obo/CL:0002063
T3 221-225 Cell denotes AECs http://purl.obolibrary.org/obo/CL:0000322