PubMed:23418199 / 542-769
Annnotations
Glycosmos6-MAT
{"project":"Glycosmos6-MAT","denotations":[{"id":"T2","span":{"begin":46,"end":50},"obj":"http://purl.obolibrary.org/obo/MAT_0000135"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
sentences
{"project":"sentences","denotations":[{"id":"TextSentencer_T4","span":{"begin":0,"end":227},"obj":"Sentence"},{"id":"T4","span":{"begin":0,"end":227},"obj":"Sentence"},{"id":"T4","span":{"begin":0,"end":227},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
DisGeNET
{"project":"DisGeNET","denotations":[{"id":"T20","span":{"begin":14,"end":19},"obj":"gene:55959"},{"id":"T21","span":{"begin":84,"end":113},"obj":"disease:C3812887"},{"id":"T22","span":{"begin":125,"end":130},"obj":"gene:55959"},{"id":"T23","span":{"begin":115,"end":118},"obj":"disease:C3812887"},{"id":"T24","span":{"begin":14,"end":19},"obj":"gene:55959"},{"id":"T25","span":{"begin":115,"end":118},"obj":"disease:C1800706"},{"id":"T26","span":{"begin":14,"end":19},"obj":"gene:55959"},{"id":"T27","span":{"begin":84,"end":113},"obj":"disease:C1800706"},{"id":"T28","span":{"begin":14,"end":19},"obj":"gene:55959"},{"id":"T29","span":{"begin":115,"end":118},"obj":"disease:C3812887"},{"id":"T30","span":{"begin":125,"end":130},"obj":"gene:55959"},{"id":"T31","span":{"begin":84,"end":113},"obj":"disease:C3812887"},{"id":"T32","span":{"begin":125,"end":130},"obj":"gene:55959"},{"id":"T33","span":{"begin":84,"end":113},"obj":"disease:C1800706"},{"id":"T34","span":{"begin":125,"end":130},"obj":"gene:55959"},{"id":"T35","span":{"begin":115,"end":118},"obj":"disease:C1800706"}],"relations":[{"id":"R11","pred":"associated_with","subj":"T20","obj":"T21"},{"id":"R12","pred":"associated_with","subj":"T22","obj":"T23"},{"id":"R13","pred":"associated_with","subj":"T24","obj":"T25"},{"id":"R14","pred":"associated_with","subj":"T26","obj":"T27"},{"id":"R15","pred":"associated_with","subj":"T28","obj":"T29"},{"id":"R16","pred":"associated_with","subj":"T30","obj":"T31"},{"id":"R17","pred":"associated_with","subj":"T32","obj":"T33"},{"id":"R18","pred":"associated_with","subj":"T34","obj":"T35"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
GlycoBiology-FMA
{"project":"GlycoBiology-FMA","denotations":[{"id":"_T17","span":{"begin":46,"end":50},"obj":"FMAID:7195"},{"id":"_T18","span":{"begin":46,"end":50},"obj":"FMAID:169341"},{"id":"_T19","span":{"begin":46,"end":50},"obj":"FMAID:93670"},{"id":"_T20","span":{"begin":95,"end":104},"obj":"FMAID:66326"},{"id":"_T21","span":{"begin":95,"end":104},"obj":"FMAID:171535"},{"id":"_T22","span":{"begin":131,"end":138},"obj":"FMAID:165447"},{"id":"_T23","span":{"begin":131,"end":138},"obj":"FMAID:67257"},{"id":"_T24","span":{"begin":186,"end":219},"obj":"FMAID:167082"},{"id":"_T25","span":{"begin":186,"end":219},"obj":"FMAID:62501"},{"id":"_T26","span":{"begin":186,"end":219},"obj":"FMAID:62500"},{"id":"_T27","span":{"begin":186,"end":219},"obj":"FMAID:167081"},{"id":"_T28","span":{"begin":186,"end":219},"obj":"FMAID:166735"},{"id":"_T29","span":{"begin":186,"end":219},"obj":"FMAID:166736"},{"id":"_T30","span":{"begin":194,"end":202},"obj":"FMAID:264783"},{"id":"_T31","span":{"begin":194,"end":202},"obj":"FMAID:242016"},{"id":"_T32","span":{"begin":194,"end":219},"obj":"FMAID:62499"},{"id":"_T33","span":{"begin":194,"end":219},"obj":"FMAID:166730"},{"id":"_T34","span":{"begin":203,"end":219},"obj":"FMAID:67559"},{"id":"_T35","span":{"begin":203,"end":219},"obj":"FMAID:83514"},{"id":"_T36","span":{"begin":203,"end":219},"obj":"FMAID:165731"},{"id":"_T37","span":{"begin":203,"end":219},"obj":"FMAID:169653"},{"id":"_T38","span":{"begin":203,"end":219},"obj":"FMAID:66768"},{"id":"_T39","span":{"begin":203,"end":219},"obj":"FMAID:197786"},{"id":"_T40","span":{"begin":203,"end":219},"obj":"FMAID:69074"},{"id":"_T41","span":{"begin":203,"end":219},"obj":"FMAID:164922"},{"id":"_T42","span":{"begin":203,"end":219},"obj":"FMAID:69075"},{"id":"_T43","span":{"begin":203,"end":219},"obj":"FMAID:169652"},{"id":"_T44","span":{"begin":203,"end":219},"obj":"FMAID:165528"},{"id":"_T45","span":{"begin":203,"end":219},"obj":"FMAID:67799"},{"id":"_T46","span":{"begin":214,"end":219},"obj":"FMAID:169002"},{"id":"_T47","span":{"begin":214,"end":219},"obj":"FMAID:68646"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
uniprot-mouse
{"project":"uniprot-mouse","denotations":[{"id":"T4","span":{"begin":14,"end":19},"obj":"http://www.uniprot.org/uniprot/Q9D8E2"},{"id":"T5","span":{"begin":125,"end":130},"obj":"http://www.uniprot.org/uniprot/Q9D8E2"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
GlycoBiology-NCBITAXON
{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T5","span":{"begin":95,"end":104},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/136615"},{"id":"T6","span":{"begin":214,"end":219},"obj":"http://purl.bioontology.org/ontology/STY/T025"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T6","span":{"begin":156,"end":165},"obj":"http://purl.obolibrary.org/obo/GO_0051179"},{"id":"T7","span":{"begin":194,"end":202},"obj":"http://purl.obolibrary.org/obo/GO_0048286"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":214,"end":219},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T2","span":{"begin":46,"end":50},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
EDAM-topics
{"project":"EDAM-topics","denotations":[{"id":"T3","span":{"begin":51,"end":58},"obj":"http://edamontology.org/topic_3277"},{"id":"T4","span":{"begin":64,"end":69},"obj":"http://edamontology.org/topic_2815"},{"id":"T5","span":{"begin":131,"end":138},"obj":"http://edamontology.org/topic_0078"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
EDAM-DFO
{"project":"EDAM-DFO","denotations":[{"id":"T3","span":{"begin":131,"end":138},"obj":"http://edamontology.org/data_1467"},{"id":"T4","span":{"begin":131,"end":138},"obj":"http://edamontology.org/format_1208"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
Allie
{"project":"Allie","denotations":[{"id":"SS1_23418199_3_0","span":{"begin":84,"end":113},"obj":"expanded"},{"id":"SS2_23418199_3_0","span":{"begin":115,"end":118},"obj":"abbr"},{"id":"SS1_23418199_3_1","span":{"begin":194,"end":219},"obj":"expanded"},{"id":"SS2_23418199_3_1","span":{"begin":221,"end":225},"obj":"abbr"}],"relations":[{"id":"AE1_23418199_3_0","pred":"abbreviatedTo","subj":"SS1_23418199_3_0","obj":"SS2_23418199_3_0"},{"id":"AE1_23418199_3_1","pred":"abbreviatedTo","subj":"SS1_23418199_3_1","obj":"SS2_23418199_3_1"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
PubmedHPO
{"project":"PubmedHPO","denotations":[{"id":"T3","span":{"begin":95,"end":113},"obj":"HP_0002206"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
GlycoBiology-MAT
{"project":"GlycoBiology-MAT","denotations":[{"id":"T2","span":{"begin":46,"end":50},"obj":"http://purl.obolibrary.org/obo/MAT_0000135"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
performance-test
{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T2","span":{"begin":46,"end":50},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
Anatomy-MAT
{"project":"Anatomy-MAT","denotations":[{"id":"T2","span":{"begin":46,"end":50},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000135"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
mondo_disease
{"project":"mondo_disease","denotations":[{"id":"T4","span":{"begin":84,"end":113},"obj":"Disease"},{"id":"T5","span":{"begin":115,"end":118},"obj":"Disease"},{"id":"T7","span":{"begin":173,"end":185},"obj":"Disease"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0008345"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0002429"},{"id":"A6","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0008345"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005043"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
NCBITAXON
{"project":"NCBITAXON","denotations":[{"id":"T2","span":{"begin":64,"end":69},"obj":"OrganismTaxon"}],"attributes":[{"id":"A2","pred":"db_id","subj":"T2","obj":"9606"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
Anatomy-UBERON
{"project":"Anatomy-UBERON","denotations":[{"id":"T3","span":{"begin":46,"end":50},"obj":"Body_part"},{"id":"T4","span":{"begin":186,"end":219},"obj":"Body_part"},{"id":"T5","span":{"begin":221,"end":225},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CL_0002063"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CL_0000322"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
HP-phenotype
{"project":"HP-phenotype","denotations":[{"id":"T4","span":{"begin":95,"end":113},"obj":"Phenotype"}],"attributes":[{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0002206"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}
CL-cell
{"project":"CL-cell","denotations":[{"id":"T2","span":{"begin":186,"end":219},"obj":"Cell"},{"id":"T3","span":{"begin":221,"end":225},"obj":"Cell"}],"attributes":[{"id":"A2","pred":"cl_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL:0002063"},{"id":"A3","pred":"cl_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL:0000322"}],"text":"We found that Sulf2 mRNA was overexpressed in lung samples from human patients with idiopathic pulmonary fibrosis (IPF), and Sulf2 protein was specifically localized to the hyperplastic type II alveolar epithelial cells (AECs)."}