PubMed:22736029 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/22736029","sourcedb":"PubMed","sourceid":"22736029","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/22736029","text":"G2019S leucine-rich repeat kinase 2 causes uncoupling protein-mediated mitochondrial depolarization.\nThe G2019S leucine rich repeat kinase 2 (LRRK2) mutation is the most common genetic cause of Parkinson's disease (PD), clinically and pathologically indistinguishable from idiopathic PD. Mitochondrial abnormalities are a common feature in PD pathogenesis and we have investigated the impact of G2019S mutant LRRK2 expression on mitochondrial bioenergetics. LRRK2 protein expression was detected in fibroblasts and lymphoblasts at levels higher than those observed in the mouse brain. The presence of G2019S LRRK2 mutation did not influence LRRK2 expression in fibroblasts. However, the expression of the G2019S LRRK2 mutation in both fibroblast and neuroblastoma cells was associated with mitochondrial uncoupling. This was characterized by decreased mitochondrial membrane potential and increased oxygen utilization under basal and oligomycin-inhibited conditions. This resulted in a decrease in cellular ATP levels consistent with compromised cellular function. This uncoupling of mitochondrial oxidative phosphorylation was associated with a cell-specific increase in uncoupling protein (UCP) 2 and 4 expression. Restoration of mitochondrial membrane potential by the UCP inhibitor genipin confirmed the role of UCPs in this mechanism. The G2019S LRRK2-induced mitochondrial uncoupling and UCP4 mRNA up-regulation were LRRK2 kinase-dependent, whereas endogenous LRRK2 levels were required for constitutive UCP expression. We propose that normal mitochondrial function was deregulated by the expression of G2019S LRRK2 in a kinase-dependent mechanism that is a modification of the normal LRRK2 function, and this leads to the vulnerability of selected neuronal populations in PD.","tracks":[{"project":"PubTator4TogoVar","denotations":[{"id":"22736029_0","span":{"begin":0,"end":6},"obj":"ProteinMutation"},{"id":"22736029_1","span":{"begin":1609,"end":1615},"obj":"ProteinMutation"},{"id":"22736029_2","span":{"begin":1344,"end":1350},"obj":"ProteinMutation"},{"id":"22736029_3","span":{"begin":705,"end":711},"obj":"ProteinMutation"},{"id":"22736029_4","span":{"begin":601,"end":607},"obj":"ProteinMutation"},{"id":"22736029_5","span":{"begin":395,"end":401},"obj":"ProteinMutation"},{"id":"22736029_6","span":{"begin":105,"end":111},"obj":"ProteinMutation"}],"attributes":[{"id":"22736029_0_ProteinMutation","pred":"proteinmutation","subj":"22736029_0","obj":"rs34637584"},{"id":"22736029_1_ProteinMutation","pred":"proteinmutation","subj":"22736029_1","obj":"rs34637584"},{"id":"22736029_2_ProteinMutation","pred":"proteinmutation","subj":"22736029_2","obj":"rs34637584"},{"id":"22736029_3_ProteinMutation","pred":"proteinmutation","subj":"22736029_3","obj":"rs34637584"},{"id":"22736029_4_ProteinMutation","pred":"proteinmutation","subj":"22736029_4","obj":"rs34637584"},{"id":"22736029_5_ProteinMutation","pred":"proteinmutation","subj":"22736029_5","obj":"rs34637584"},{"id":"22736029_6_ProteinMutation","pred":"proteinmutation","subj":"22736029_6","obj":"rs34637584"},{"subj":"22736029_0","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_1","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_2","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_3","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_4","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_5","pred":"source","obj":"PubTator4TogoVar"},{"subj":"22736029_6","pred":"source","obj":"PubTator4TogoVar"}]},{"project":"c_corpus","denotations":[{"id":"T1","span":{"begin":5,"end":14},"obj":"CHEBI:15603"},{"id":"T3","span":{"begin":7,"end":14},"obj":"6308"},{"id":"T4","span":{"begin":7,"end":14},"obj":"SO:0001437"},{"id":"T8","span":{"begin":20,"end":26},"obj":"SO:0001068"},{"id":"T13","span":{"begin":54,"end":61},"obj":"SO:0000104"},{"id":"T12","span":{"begin":54,"end":61},"obj":"PR:000000001"},{"id":"T10","span":{"begin":54,"end":61},"obj":"CHEBI:36080"},{"id":"T11","span":{"begin":54,"end":61},"obj":"CHEBI:11122"},{"id":"T9","span":{"begin":54,"end":61},"obj":"GO:0003675"},{"id":"T14","span":{"begin":71,"end":99},"obj":"GO:0051882"},{"id":"T15","span":{"begin":110,"end":119},"obj":"CHEBI:15603"},{"id":"T17","span":{"begin":112,"end":119},"obj":"6308"},{"id":"T18","span":{"begin":112,"end":119},"obj":"SO:0001437"},{"id":"T22","span":{"begin":125,"end":131},"obj":"SO:0001068"},{"id":"T23","span":{"begin":142,"end":147},"obj":"PR:Q5S006"},{"id":"T24","span":{"begin":142,"end":147},"obj":"PR:000003033"},{"id":"T25","span":{"begin":142,"end":147},"obj":"PR:Q5S007"},{"id":"T26","span":{"begin":149,"end":157},"obj":"SO:0000109"},{"id":"T31","span":{"begin":194,"end":213},"obj":"D010300"},{"id":"T32","span":{"begin":194,"end":213},"obj":"D010300"},{"id":"T35","span":{"begin":343,"end":355},"obj":"GO:0009405"},{"id":"T36","span":{"begin":385,"end":391},"obj":"PR:Q54JW9"},{"id":"T37","span":{"begin":385,"end":391},"obj":"PR:Q642J4"},{"id":"T38","span":{"begin":409,"end":414},"obj":"PR:Q5S006"},{"id":"T39","span":{"begin":409,"end":414},"obj":"PR:000003033"},{"id":"T40","span":{"begin":409,"end":414},"obj":"PR:Q5S007"},{"id":"T41","span":{"begin":458,"end":463},"obj":"PR:Q5S006"},{"id":"T42","span":{"begin":458,"end":463},"obj":"PR:000003033"},{"id":"T43","span":{"begin":458,"end":463},"obj":"PR:Q5S007"},{"id":"T44","span":{"begin":458,"end":471},"obj":"D000071158"},{"id":"T49","span":{"begin":464,"end":471},"obj":"SO:0000104"},{"id":"T48","span":{"begin":464,"end":471},"obj":"PR:000000001"},{"id":"T45","span":{"begin":464,"end":471},"obj":"GO:0003675"},{"id":"T50","span":{"begin":572,"end":577},"obj":"10090"},{"id":"T51","span":{"begin":572,"end":577},"obj":"D051379"},{"id":"T52","span":{"begin":578,"end":583},"obj":"UBERON:6110636"},{"id":"T53","span":{"begin":578,"end":583},"obj":"UBERON:0000955"},{"id":"T54","span":{"begin":608,"end":613},"obj":"PR:Q5S006"},{"id":"T55","span":{"begin":608,"end":613},"obj":"PR:000003033"},{"id":"T56","span":{"begin":608,"end":613},"obj":"PR:Q5S007"},{"id":"T57","span":{"begin":614,"end":622},"obj":"SO:0000109"},{"id":"T58","span":{"begin":641,"end":646},"obj":"PR:Q5S006"},{"id":"T59","span":{"begin":641,"end":646},"obj":"PR:000003033"},{"id":"T60","span":{"begin":641,"end":646},"obj":"PR:Q5S007"},{"id":"T61","span":{"begin":712,"end":717},"obj":"PR:Q5S006"},{"id":"T62","span":{"begin":712,"end":717},"obj":"PR:000003033"},{"id":"T63","span":{"begin":712,"end":717},"obj":"PR:Q5S007"},{"id":"T64","span":{"begin":718,"end":726},"obj":"SO:0000109"},{"id":"T65","span":{"begin":735,"end":745},"obj":"CL:0000057"},{"id":"T66","span":{"begin":750,"end":763},"obj":"D009447"},{"id":"T67","span":{"begin":750,"end":763},"obj":"D009447"},{"id":"T68","span":{"begin":852,"end":874},"obj":"GO:0031966"},{"id":"T69","span":{"begin":866,"end":874},"obj":"UBERON:0000094"},{"id":"T71","span":{"begin":866,"end":874},"obj":"UBERON:0000158"},{"id":"T73","span":{"begin":899,"end":905},"obj":"7806"},{"id":"T72","span":{"begin":899,"end":905},"obj":"CHEBI:25805"},{"id":"T74","span":{"begin":934,"end":944},"obj":"D009840"},{"id":"T75","span":{"begin":934,"end":944},"obj":"CHEBI:25675"},{"id":"T76","span":{"begin":934,"end":944},"obj":"D009840"},{"id":"T78","span":{"begin":1007,"end":1010},"obj":"318"},{"id":"T77","span":{"begin":1007,"end":1010},"obj":"D000255"},{"id":"T79","span":{"begin":1007,"end":1010},"obj":"CHEBI:30616"},{"id":"T80","span":{"begin":1007,"end":1010},"obj":"D000255"},{"id":"T81","span":{"begin":1007,"end":1010},"obj":"CHEBI:15422"},{"id":"T82","span":{"begin":1098,"end":1123},"obj":"GO:0006119"},{"id":"T87","span":{"begin":1183,"end":1190},"obj":"PR:000000001"},{"id":"T85","span":{"begin":1183,"end":1190},"obj":"CHEBI:36080"},{"id":"T86","span":{"begin":1183,"end":1190},"obj":"CHEBI:11122"},{"id":"T88","span":{"begin":1183,"end":1190},"obj":"SO:0000104"},{"id":"T84","span":{"begin":1183,"end":1190},"obj":"GO:0003675"},{"id":"T93","span":{"begin":1192,"end":1198},"obj":"PR:Q11119"},{"id":"T94","span":{"begin":1192,"end":1198},"obj":"Q5R5A8"},{"id":"T95","span":{"begin":1192,"end":1198},"obj":"PR:P70406"},{"id":"T96","span":{"begin":1192,"end":1198},"obj":"PR:Q9ZWG1"},{"id":"T97","span":{"begin":1192,"end":1198},"obj":"Q3SZI5"},{"id":"T98","span":{"begin":1192,"end":1198},"obj":"P56500"},{"id":"T99","span":{"begin":1192,"end":1198},"obj":"Q9N2J1"},{"id":"T100","span":{"begin":1192,"end":1198},"obj":"O97562"},{"id":"T101","span":{"begin":1192,"end":1198},"obj":"P55851"},{"id":"T102","span":{"begin":1192,"end":1198},"obj":"Q9W725"},{"id":"T103","span":{"begin":1192,"end":1198},"obj":"PR:000017036"},{"id":"T104","span":{"begin":1192,"end":1198},"obj":"P70406"},{"id":"T105","span":{"begin":1192,"end":1198},"obj":"PR:Q9W720"},{"id":"T106","span":{"begin":1192,"end":1198},"obj":"Q9W720"},{"id":"T107","span":{"begin":1192,"end":1198},"obj":"PR:P56500"},{"id":"T108","span":{"begin":1192,"end":1198},"obj":"PR:P55851"},{"id":"T110","span":{"begin":1232,"end":1254},"obj":"GO:0031966"},{"id":"T111","span":{"begin":1246,"end":1254},"obj":"UBERON:0000094"},{"id":"T113","span":{"begin":1246,"end":1254},"obj":"UBERON:0000158"},{"id":"T114","span":{"begin":1272,"end":1275},"obj":"PR:P12242"},{"id":"T115","span":{"begin":1272,"end":1275},"obj":"PR:000017035"},{"id":"T116","span":{"begin":1272,"end":1275},"obj":"PR:P04633"},{"id":"T117","span":{"begin":1272,"end":1275},"obj":"PR:P25874"},{"id":"T118","span":{"begin":1272,"end":1285},"obj":"CHEBI:145437"},{"id":"T120","span":{"begin":1286,"end":1293},"obj":"CHEBI:5298"},{"id":"T121","span":{"begin":1286,"end":1293},"obj":"C007834"},{"id":"T122","span":{"begin":1286,"end":1293},"obj":"C007834"},{"id":"T123","span":{"begin":1286,"end":1293},"obj":"C007834"},{"id":"T124","span":{"begin":1351,"end":1356},"obj":"PR:Q5S006"},{"id":"T125","span":{"begin":1351,"end":1356},"obj":"PR:000003033"},{"id":"T126","span":{"begin":1351,"end":1356},"obj":"PR:Q5S007"},{"id":"T131","span":{"begin":1394,"end":1398},"obj":"PR:000015023"},{"id":"T132","span":{"begin":1394,"end":1398},"obj":"PR:O95847"},{"id":"T133","span":{"begin":1394,"end":1398},"obj":"PR:Q9SB52"},{"id":"T134","span":{"begin":1394,"end":1398},"obj":"O95847"},{"id":"T137","span":{"begin":1399,"end":1403},"obj":"SO:0000234"},{"id":"T135","span":{"begin":1399,"end":1403},"obj":"D012333"},{"id":"T136","span":{"begin":1399,"end":1403},"obj":"CHEBI:33699"},{"id":"T138","span":{"begin":1407,"end":1417},"obj":"GO:0065007"},{"id":"T139","span":{"begin":1423,"end":1428},"obj":"PR:Q5S006"},{"id":"T140","span":{"begin":1423,"end":1428},"obj":"PR:000003033"},{"id":"T141","span":{"begin":1423,"end":1428},"obj":"PR:Q5S007"},{"id":"T142","span":{"begin":1466,"end":1471},"obj":"PR:Q5S006"},{"id":"T143","span":{"begin":1466,"end":1471},"obj":"PR:000003033"},{"id":"T144","span":{"begin":1466,"end":1471},"obj":"PR:Q5S007"},{"id":"T145","span":{"begin":1510,"end":1513},"obj":"PR:P12242"},{"id":"T146","span":{"begin":1510,"end":1513},"obj":"PR:000017035"},{"id":"T147","span":{"begin":1510,"end":1513},"obj":"PR:P04633"},{"id":"T148","span":{"begin":1510,"end":1513},"obj":"PR:P25874"},{"id":"T149","span":{"begin":1616,"end":1621},"obj":"PR:Q5S006"},{"id":"T150","span":{"begin":1616,"end":1621},"obj":"PR:000003033"},{"id":"T151","span":{"begin":1616,"end":1621},"obj":"PR:Q5S007"},{"id":"T152","span":{"begin":1691,"end":1696},"obj":"PR:Q5S006"},{"id":"T153","span":{"begin":1691,"end":1696},"obj":"PR:000003033"},{"id":"T154","span":{"begin":1691,"end":1696},"obj":"PR:Q5S007"}],"attributes":[{"subj":"T1","pred":"source","obj":"c_corpus"},{"subj":"T3","pred":"source","obj":"c_corpus"},{"subj":"T4","pred":"source","obj":"c_corpus"},{"subj":"T8","pred":"source","obj":"c_corpus"},{"subj":"T13","pred":"source","obj":"c_corpus"},{"subj":"T12","pred":"source","obj":"c_corpus"},{"subj":"T10","pred":"source","obj":"c_corpus"},{"subj":"T11","pred":"source","obj":"c_corpus"},{"subj":"T9","pred":"source","obj":"c_corpus"},{"subj":"T14","pred":"source","obj":"c_corpus"},{"subj":"T15","pred":"source","obj":"c_corpus"},{"subj":"T17","pred":"source","obj":"c_corpus"},{"subj":"T18","pred":"source","obj":"c_corpus"},{"subj":"T22","pred":"source","obj":"c_corpus"},{"subj":"T23","pred":"source","obj":"c_corpus"},{"subj":"T24","pred":"source","obj":"c_corpus"},{"subj":"T25","pred":"source","obj":"c_corpus"},{"subj":"T26","pred":"source","obj":"c_corpus"},{"subj":"T31","pred":"source","obj":"c_corpus"},{"subj":"T32","pred":"source","obj":"c_corpus"},{"subj":"T35","pred":"source","obj":"c_corpus"},{"subj":"T36","pred":"source","obj":"c_corpus"},{"subj":"T37","pred":"source","obj":"c_corpus"},{"subj":"T38","pred":"source","obj":"c_corpus"},{"subj":"T39","pred":"source","obj":"c_corpus"},{"subj":"T40","pred":"source","obj":"c_corpus"},{"subj":"T41","pred":"source","obj":"c_corpus"},{"subj":"T42","pred":"source","obj":"c_corpus"},{"subj":"T43","pred":"source","obj":"c_corpus"},{"subj":"T44","pred":"source","obj":"c_corpus"},{"subj":"T49","pred":"source","obj":"c_corpus"},{"subj":"T48","pred":"source","obj":"c_corpus"},{"subj":"T45","pred":"source","obj":"c_corpus"},{"subj":"T50","pred":"source","obj":"c_corpus"},{"subj":"T51","pred":"source","obj":"c_corpus"},{"subj":"T52","pred":"source","obj":"c_corpus"},{"subj":"T53","pred":"source","obj":"c_corpus"},{"subj":"T54","pred":"source","obj":"c_corpus"},{"subj":"T55","pred":"source","obj":"c_corpus"},{"subj":"T56","pred":"source","obj":"c_corpus"},{"subj":"T57","pred":"source","obj":"c_corpus"},{"subj":"T58","pred":"source","obj":"c_corpus"},{"subj":"T59","pred":"source","obj":"c_corpus"},{"subj":"T60","pred":"source","obj":"c_corpus"},{"subj":"T61","pred":"source","obj":"c_corpus"},{"subj":"T62","pred":"source","obj":"c_corpus"},{"subj":"T63","pred":"source","obj":"c_corpus"},{"subj":"T64","pred":"source","obj":"c_corpus"},{"subj":"T65","pred":"source","obj":"c_corpus"},{"subj":"T66","pred":"source","obj":"c_corpus"},{"subj":"T67","pred":"source","obj":"c_corpus"},{"subj":"T68","pred":"source","obj":"c_corpus"},{"subj":"T69","pred":"source","obj":"c_corpus"},{"subj":"T71","pred":"source","obj":"c_corpus"},{"subj":"T73","pred":"source","obj":"c_corpus"},{"subj":"T72","pred":"source","obj":"c_corpus"},{"subj":"T74","pred":"source","obj":"c_corpus"},{"subj":"T75","pred":"source","obj":"c_corpus"},{"subj":"T76","pred":"source","obj":"c_corpus"},{"subj":"T78","pred":"source","obj":"c_corpus"},{"subj":"T77","pred":"source","obj":"c_corpus"},{"subj":"T79","pred":"source","obj":"c_corpus"},{"subj":"T80","pred":"source","obj":"c_corpus"},{"subj":"T81","pred":"source","obj":"c_corpus"},{"subj":"T82","pred":"source","obj":"c_corpus"},{"subj":"T87","pred":"source","obj":"c_corpus"},{"subj":"T85","pred":"source","obj":"c_corpus"},{"subj":"T86","pred":"source","obj":"c_corpus"},{"subj":"T88","pred":"source","obj":"c_corpus"},{"subj":"T84","pred":"source","obj":"c_corpus"},{"subj":"T93","pred":"source","obj":"c_corpus"},{"subj":"T94","pred":"source","obj":"c_corpus"},{"subj":"T95","pred":"source","obj":"c_corpus"},{"subj":"T96","pred":"source","obj":"c_corpus"},{"subj":"T97","pred":"source","obj":"c_corpus"},{"subj":"T98","pred":"source","obj":"c_corpus"},{"subj":"T99","pred":"source","obj":"c_corpus"},{"subj":"T100","pred":"source","obj":"c_corpus"},{"subj":"T101","pred":"source","obj":"c_corpus"},{"subj":"T102","pred":"source","obj":"c_corpus"},{"subj":"T103","pred":"source","obj":"c_corpus"},{"subj":"T104","pred":"source","obj":"c_corpus"},{"subj":"T105","pred":"source","obj":"c_corpus"},{"subj":"T106","pred":"source","obj":"c_corpus"},{"subj":"T107","pred":"source","obj":"c_corpus"},{"subj":"T108","pred":"source","obj":"c_corpus"},{"subj":"T110","pred":"source","obj":"c_corpus"},{"subj":"T111","pred":"source","obj":"c_corpus"},{"subj":"T113","pred":"source","obj":"c_corpus"},{"subj":"T114","pred":"source","obj":"c_corpus"},{"subj":"T115","pred":"source","obj":"c_corpus"},{"subj":"T116","pred":"source","obj":"c_corpus"},{"subj":"T117","pred":"source","obj":"c_corpus"},{"subj":"T118","pred":"source","obj":"c_corpus"},{"subj":"T120","pred":"source","obj":"c_corpus"},{"subj":"T121","pred":"source","obj":"c_corpus"},{"subj":"T122","pred":"source","obj":"c_corpus"},{"subj":"T123","pred":"source","obj":"c_corpus"},{"subj":"T124","pred":"source","obj":"c_corpus"},{"subj":"T125","pred":"source","obj":"c_corpus"},{"subj":"T126","pred":"source","obj":"c_corpus"},{"subj":"T131","pred":"source","obj":"c_corpus"},{"subj":"T132","pred":"source","obj":"c_corpus"},{"subj":"T133","pred":"source","obj":"c_corpus"},{"subj":"T134","pred":"source","obj":"c_corpus"},{"subj":"T137","pred":"source","obj":"c_corpus"},{"subj":"T135","pred":"source","obj":"c_corpus"},{"subj":"T136","pred":"source","obj":"c_corpus"},{"subj":"T138","pred":"source","obj":"c_corpus"},{"subj":"T139","pred":"source","obj":"c_corpus"},{"subj":"T140","pred":"source","obj":"c_corpus"},{"subj":"T141","pred":"source","obj":"c_corpus"},{"subj":"T142","pred":"source","obj":"c_corpus"},{"subj":"T143","pred":"source","obj":"c_corpus"},{"subj":"T144","pred":"source","obj":"c_corpus"},{"subj":"T145","pred":"source","obj":"c_corpus"},{"subj":"T146","pred":"source","obj":"c_corpus"},{"subj":"T147","pred":"source","obj":"c_corpus"},{"subj":"T148","pred":"source","obj":"c_corpus"},{"subj":"T149","pred":"source","obj":"c_corpus"},{"subj":"T150","pred":"source","obj":"c_corpus"},{"subj":"T151","pred":"source","obj":"c_corpus"},{"subj":"T152","pred":"source","obj":"c_corpus"},{"subj":"T153","pred":"source","obj":"c_corpus"},{"subj":"T154","pred":"source","obj":"c_corpus"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":712,"end":717},"obj":"gene:120892"},{"id":"T1","span":{"begin":750,"end":763},"obj":"disease:C0027819"},{"id":"T2","span":{"begin":712,"end":717},"obj":"gene:120892"},{"id":"T3","span":{"begin":750,"end":763},"obj":"disease:C0700095"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"}]},{"project":"Allie","denotations":[{"id":"SS1_22736029_1_0","span":{"begin":112,"end":140},"obj":"expanded"},{"id":"SS2_22736029_1_0","span":{"begin":142,"end":147},"obj":"abbr"},{"id":"SS1_22736029_1_1","span":{"begin":194,"end":213},"obj":"expanded"},{"id":"SS2_22736029_1_1","span":{"begin":215,"end":217},"obj":"abbr"},{"id":"SS1_22736029_8_0","span":{"begin":1172,"end":1190},"obj":"expanded"},{"id":"SS2_22736029_8_0","span":{"begin":1192,"end":1195},"obj":"abbr"}],"relations":[{"id":"AE1_22736029_1_0","pred":"abbreviatedTo","subj":"SS1_22736029_1_0","obj":"SS2_22736029_1_0"},{"id":"AE1_22736029_1_1","pred":"abbreviatedTo","subj":"SS1_22736029_1_1","obj":"SS2_22736029_1_1"},{"id":"AE1_22736029_8_0","pred":"abbreviatedTo","subj":"SS1_22736029_8_0","obj":"SS2_22736029_8_0"}],"attributes":[{"subj":"SS1_22736029_1_0","pred":"source","obj":"Allie"},{"subj":"SS2_22736029_1_0","pred":"source","obj":"Allie"},{"subj":"SS1_22736029_1_1","pred":"source","obj":"Allie"},{"subj":"SS2_22736029_1_1","pred":"source","obj":"Allie"},{"subj":"SS1_22736029_8_0","pred":"source","obj":"Allie"},{"subj":"SS2_22736029_8_0","pred":"source","obj":"Allie"}]},{"project":"UseCases_ArguminSci_Discourse","denotations":[{"id":"T1","span":{"begin":0,"end":100},"obj":"DRI_Approach"},{"id":"T2","span":{"begin":101,"end":287},"obj":"DRI_Challenge"},{"id":"T3","span":{"begin":288,"end":457},"obj":"DRI_Background"},{"id":"T4","span":{"begin":458,"end":584},"obj":"DRI_Background"},{"id":"T5","span":{"begin":585,"end":600},"obj":"DRI_Background"},{"id":"T6","span":{"begin":601,"end":613},"obj":"Token_Label.OUTSIDE"},{"id":"T7","span":{"begin":614,"end":673},"obj":"DRI_Background"},{"id":"T8","span":{"begin":674,"end":704},"obj":"DRI_Outcome"},{"id":"T9","span":{"begin":705,"end":717},"obj":"Token_Label.OUTSIDE"},{"id":"T10","span":{"begin":718,"end":815},"obj":"DRI_Outcome"},{"id":"T11","span":{"begin":816,"end":966},"obj":"DRI_Background"},{"id":"T12","span":{"begin":967,"end":1064},"obj":"DRI_Approach"},{"id":"T13","span":{"begin":1065,"end":1216},"obj":"DRI_Background"},{"id":"T14","span":{"begin":1217,"end":1339},"obj":"DRI_Background"},{"id":"T15","span":{"begin":1340,"end":1343},"obj":"DRI_Background"},{"id":"T16","span":{"begin":1344,"end":1364},"obj":"Token_Label.OUTSIDE"},{"id":"T17","span":{"begin":1365,"end":1422},"obj":"DRI_Background"},{"id":"T18","span":{"begin":1423,"end":1445},"obj":"Token_Label.OUTSIDE"},{"id":"T19","span":{"begin":1445,"end":1525},"obj":"DRI_Background"},{"id":"T20","span":{"begin":1526,"end":1608},"obj":"DRI_Challenge"},{"id":"T21","span":{"begin":1609,"end":1621},"obj":"Token_Label.OUTSIDE"},{"id":"T22","span":{"begin":1622,"end":1782},"obj":"DRI_Challenge"}],"attributes":[{"subj":"T1","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T2","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T3","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T4","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T5","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T6","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T7","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T8","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T9","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T10","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T11","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T12","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T13","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T14","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T15","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T16","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T17","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T18","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T19","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T20","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T21","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T22","pred":"source","obj":"UseCases_ArguminSci_Discourse"}]},{"project":"PubMed_ArguminSci","denotations":[{"id":"T1","span":{"begin":101,"end":287},"obj":"DRI_Challenge"},{"id":"T2","span":{"begin":288,"end":457},"obj":"DRI_Background"},{"id":"T3","span":{"begin":458,"end":584},"obj":"DRI_Background"},{"id":"T4","span":{"begin":585,"end":600},"obj":"DRI_Background"},{"id":"T5","span":{"begin":614,"end":673},"obj":"DRI_Background"},{"id":"T6","span":{"begin":674,"end":704},"obj":"DRI_Outcome"},{"id":"T7","span":{"begin":718,"end":815},"obj":"DRI_Outcome"},{"id":"T8","span":{"begin":816,"end":966},"obj":"DRI_Background"},{"id":"T9","span":{"begin":967,"end":1064},"obj":"DRI_Approach"},{"id":"T10","span":{"begin":1065,"end":1216},"obj":"DRI_Background"},{"id":"T11","span":{"begin":1217,"end":1339},"obj":"DRI_Background"},{"id":"T12","span":{"begin":1340,"end":1343},"obj":"DRI_Background"},{"id":"T13","span":{"begin":1365,"end":1422},"obj":"DRI_Background"},{"id":"T14","span":{"begin":1445,"end":1525},"obj":"DRI_Background"},{"id":"T15","span":{"begin":1526,"end":1608},"obj":"DRI_Challenge"},{"id":"T16","span":{"begin":1622,"end":1782},"obj":"DRI_Challenge"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T2","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T3","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T4","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T5","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T6","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T7","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T8","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T9","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T10","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T11","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T12","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T13","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T14","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T15","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T16","pred":"source","obj":"PubMed_ArguminSci"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":194,"end":203},"obj":"HP_0001300"},{"id":"T2","span":{"begin":288,"end":301},"obj":"HP_0001427"},{"id":"T3","span":{"begin":429,"end":442},"obj":"HP_0001427"},{"id":"T4","span":{"begin":750,"end":763},"obj":"HP_0003006"},{"id":"T5","span":{"begin":790,"end":803},"obj":"HP_0001427"},{"id":"T6","span":{"begin":852,"end":865},"obj":"HP_0001427"},{"id":"T7","span":{"begin":1084,"end":1097},"obj":"HP_0001427"},{"id":"T8","span":{"begin":1232,"end":1245},"obj":"HP_0001427"},{"id":"T9","span":{"begin":1365,"end":1378},"obj":"HP_0001427"},{"id":"T10","span":{"begin":1549,"end":1562},"obj":"HP_0001427"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"},{"subj":"T5","pred":"source","obj":"PubmedHPO"},{"subj":"T6","pred":"source","obj":"PubmedHPO"},{"subj":"T7","pred":"source","obj":"PubmedHPO"},{"subj":"T8","pred":"source","obj":"PubmedHPO"},{"subj":"T9","pred":"source","obj":"PubmedHPO"},{"subj":"T10","pred":"source","obj":"PubmedHPO"}]},{"project":"DisGeNET5_variant_disease","denotations":[{"id":"22736029-11#83#89#geners34637584","span":{"begin":1609,"end":1615},"obj":"geners34637584"},{"id":"22736029-11#253#255#diseaseC0030567","span":{"begin":1779,"end":1781},"obj":"diseaseC0030567"},{"id":"22736029-2#107#113#geners34637584","span":{"begin":395,"end":401},"obj":"geners34637584"},{"id":"22736029-2#0#27#diseaseC4020732","span":{"begin":288,"end":315},"obj":"diseaseC4020732"},{"id":"22736029-5#31#37#geners34637584","span":{"begin":705,"end":711},"obj":"geners34637584"},{"id":"22736029-5#76#89#diseaseC0027819","span":{"begin":750,"end":763},"obj":"diseaseC0027819"},{"id":"22736029-5#76#89#diseaseC0700095","span":{"begin":750,"end":763},"obj":"diseaseC0700095"}],"relations":[{"id":"83#89#geners34637584253#255#diseaseC0030567","pred":"associated_with","subj":"22736029-11#83#89#geners34637584","obj":"22736029-11#253#255#diseaseC0030567"},{"id":"107#113#geners346375840#27#diseaseC4020732","pred":"associated_with","subj":"22736029-2#107#113#geners34637584","obj":"22736029-2#0#27#diseaseC4020732"},{"id":"31#37#geners3463758476#89#diseaseC0027819","pred":"associated_with","subj":"22736029-5#31#37#geners34637584","obj":"22736029-5#76#89#diseaseC0027819"},{"id":"31#37#geners3463758476#89#diseaseC0700095","pred":"associated_with","subj":"22736029-5#31#37#geners34637584","obj":"22736029-5#76#89#diseaseC0700095"}],"attributes":[{"subj":"22736029-11#83#89#geners34637584","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-11#253#255#diseaseC0030567","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-2#107#113#geners34637584","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-2#0#27#diseaseC4020732","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-5#31#37#geners34637584","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-5#76#89#diseaseC0027819","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"22736029-5#76#89#diseaseC0700095","pred":"source","obj":"DisGeNET5_variant_disease"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"22736029-11#90#95#gene120892","span":{"begin":1616,"end":1621},"obj":"gene120892"},{"id":"22736029-11#165#170#gene120892","span":{"begin":1691,"end":1696},"obj":"gene120892"},{"id":"22736029-11#253#255#diseaseC0030567","span":{"begin":1779,"end":1781},"obj":"diseaseC0030567"},{"id":"22736029-2#121#126#gene120892","span":{"begin":409,"end":414},"obj":"gene120892"},{"id":"22736029-2#0#27#diseaseC4020732","span":{"begin":288,"end":315},"obj":"diseaseC4020732"},{"id":"22736029-5#38#43#gene120892","span":{"begin":712,"end":717},"obj":"gene120892"},{"id":"22736029-5#76#89#diseaseC0027819","span":{"begin":750,"end":763},"obj":"diseaseC0027819"},{"id":"22736029-5#76#89#diseaseC0700095","span":{"begin":750,"end":763},"obj":"diseaseC0700095"}],"relations":[{"id":"90#95#gene120892253#255#diseaseC0030567","pred":"associated_with","subj":"22736029-11#90#95#gene120892","obj":"22736029-11#253#255#diseaseC0030567"},{"id":"165#170#gene120892253#255#diseaseC0030567","pred":"associated_with","subj":"22736029-11#165#170#gene120892","obj":"22736029-11#253#255#diseaseC0030567"},{"id":"121#126#gene1208920#27#diseaseC4020732","pred":"associated_with","subj":"22736029-2#121#126#gene120892","obj":"22736029-2#0#27#diseaseC4020732"},{"id":"38#43#gene12089276#89#diseaseC0027819","pred":"associated_with","subj":"22736029-5#38#43#gene120892","obj":"22736029-5#76#89#diseaseC0027819"},{"id":"38#43#gene12089276#89#diseaseC0700095","pred":"associated_with","subj":"22736029-5#38#43#gene120892","obj":"22736029-5#76#89#diseaseC0700095"}],"attributes":[{"subj":"22736029-11#90#95#gene120892","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-11#165#170#gene120892","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-11#253#255#diseaseC0030567","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-2#121#126#gene120892","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-2#0#27#diseaseC4020732","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-5#38#43#gene120892","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-5#76#89#diseaseC0027819","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22736029-5#76#89#diseaseC0700095","pred":"source","obj":"DisGeNET5_gene_disease"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"PubTator4TogoVar","color":"#ecea93","default":true},{"id":"c_corpus","color":"#d093ec"},{"id":"DisGeNET","color":"#93ecb6"},{"id":"Allie","color":"#ec9c93"},{"id":"UseCases_ArguminSci_Discourse","color":"#93a4ec"},{"id":"PubMed_ArguminSci","color":"#beec93"},{"id":"PubmedHPO","color":"#ec93d8"},{"id":"DisGeNET5_variant_disease","color":"#93ece6"},{"id":"DisGeNET5_gene_disease","color":"#eccc93"}]}]}}