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sonoma2

Id Subject Object Predicate Lexical cue
T0 0-16 POSREG denotes Gain-of-function
T1 17-23 VAR denotes mutant
T2 24-27 GENE denotes p53
T3 28-39 POSREG denotes upregulates
T4 44-54 MPA denotes chemokines
T5 59-67 POSREG denotes enhances
T6 73-82 CPA denotes migration
T7 118-121 GENE denotes p53
T8 125-139 DISEASE denotes carcinogenesis
T9 204-216 GENE denotes p53 proteins
T10 204-207 GENE denotes p53
T11 221-228 POSREG denotes enhance
T12 229-242 CPA denotes tumorigenesis
T13 247-257 CPA denotes metastasis
T14 312-328 POSREG denotes gain-of-function
T15 330-333 POSREG denotes GOF
T16 335-338 GENE denotes p53
T17 352-358 POSREG denotes induce
T18 359-367 CPA denotes motility
T19 390-393 GENE denotes p53
T20 394-400 VAR denotes -R175H
T21 402-408 VAR denotes -R273H
T22 413-418 VAR denotes -D281
T23 427-435 POSREG denotes enhanced
T24 436-445 CPA denotes migration
T25 570-573 GENE denotes p53
T26 574-581 VAR denotes mutants
T27 583-591 POSREG denotes enhanced
T28 592-601 CPA denotes migration
T29 606-613 NEGREG denotes reduced
T30 617-631 NEGREG denotes downregulation
T31 643-657 GENE denotes factor-kappaB2
T32 665-668 GENE denotes p53
T33 691-694 POSREG denotes GOF
T34 695-698 GENE denotes p53
T35 695-698 GENE denotes p53
T36 708-718 POSREG denotes upregulate
T37 733-743 MPA denotes expression
T38 749-771 MPA denotes inflammatory mediators
T39 777-787 REG denotes contribute
T40 811-824 CPA denotes tumorigenesis
T41 826-834 POSREG denotes Elevated
T42 835-845 MPA denotes expression
T43 849-854 GENE denotes CXCL5
T44 856-861 GENE denotes CXCL8
T45 866-872 GENE denotes CXCL12
T46 913-916 GENE denotes p53
T47 918-931 MPA denotes Transcription
T48 936-944 POSREG denotes elevated
T49 948-953 GENE denotes CXCL5
T50 958-963 GENE denotes CXCL8
T51 986-992 POSREG denotes higher
T52 1017-1020 GENE denotes p53
T53 1040-1043 GENE denotes p53
T54 1044-1053 NEGREG denotes repressed
T55 1119-1127 POSREG denotes enhanced
T56 1128-1136 MPA denotes presence
T57 1169-1174 GENE denotes CXCL5
T58 1187-1198 VAR denotes H1299/R273H
T59 1224-1233 POSREG denotes increased
T60 1234-1258 MPA denotes transcriptional activity
T61 1298-1308 NEGREG denotes repression
T62 1312-1317 GENE denotes CXCL5
T63 1318-1327 NEGREG denotes inhibited
T64 1333-1342 CPA denotes migration
T65 1366-1375 VAR denotes knockdown
T66 1394-1400 VAR denotes mutant
T67 1401-1404 GENE denotes p53
T68 1408-1419 DISEASE denotes lung cancer
T69 1423-1431 DISEASE denotes melanoma
T70 1438-1445 NEGREG denotes reduced
T71 1446-1451 GENE denotes CXCL5
T72 1452-1462 MPA denotes expression
T73 1467-1481 CPA denotes cell migration
T74 1514-1523 VAR denotes knockdown
T75 1527-1533 VAR denotes mutant
T76 1534-1537 GENE denotes p53
T77 1558-1565 NEGREG denotes reduced
T78 1566-1576 MPA denotes expression
T79 1596-1603 MPA denotes targets
T80 1644-1666 MPA denotes inflammatory mediators
T81 1677-1682 GENE denotes CXCL5
T82 1683-1693 MPA denotes expression
T83 1703-1711 POSREG denotes elevated
T84 1715-1725 DISEASE denotes lung tumor
T85 1749-1752 GENE denotes p53
T86 1765-1774 REG denotes relevance
T87 1784-1790 DISEASE denotes cancer
T88 1836-1839 POSREG denotes GOF
T89 1840-1843 GENE denotes p53
T90 1857-1867 GENE denotes chemokines
T91 1871-1879 POSREG denotes enhanced
T92 1885-1893 CPA denotes motility
R70 T75 T77 CauseOf mutant,reduced
R71 T76 T74 ThemeOf p53,knockdown
R72 T76 T75 ThemeOf p53,mutant
R73 T78 T77 ThemeOf expression,reduced
R74 T79 T78 ThemeOf targets,expression
R75 T79 T77 ThemeOf targets,reduced
R0 T0 T3 CauseOf Gain-of-function,upregulates
R1 T0 T5 CauseOf Gain-of-function,enhances
R2 T1 T0 CauseOf mutant,Gain-of-function
R3 T1 T3 CauseOf mutant,upregulates
R4 T1 T5 CauseOf mutant,enhances
R5 T2 T1 ThemeOf p53,mutant
R6 T4 T0 ThemeOf chemokines,Gain-of-function
R7 T4 T3 ThemeOf chemokines,upregulates
R8 T6 T0 ThemeOf migration,Gain-of-function
R9 T6 T5 ThemeOf migration,enhances
R10 T12 T11 ThemeOf tumorigenesis,enhance
R11 T13 T11 ThemeOf metastasis,enhance
R12 T15 T14 CauseOf GOF,gain-of-function
R13 T14 T17 CauseOf gain-of-function,induce
R14 T15 T17 CauseOf GOF,induce
R15 T18 T14 ThemeOf motility,gain-of-function
R16 T18 T17 ThemeOf motility,induce
R17 T19 T20 ThemeOf p53,-R175H
R18 T19 T21 ThemeOf p53,-R273H
R19 T19 T22 ThemeOf p53,-D281
R20 T20 T23 CauseOf -R175H,enhanced
R21 T21 T23 CauseOf -R273H,enhanced
R22 T22 T23 CauseOf -D281,enhanced
R23 T24 T23 ThemeOf migration,enhanced
R24 T25 T26 ThemeOf p53,mutants
R25 T26 T27 CauseOf mutants,enhanced
R26 T26 T29 CauseOf mutants,reduced
R27 T28 T27 ThemeOf migration,enhanced
R28 T28 T29 ThemeOf migration,reduced
R29 T30 T27 CauseOf downregulation,enhanced
R30 T30 T29 CauseOf downregulation,reduced
R31 T31 T30 ThemeOf factor-kappaB2,downregulation
R32 T33 T36 CauseOf GOF,upregulate
R33 T33 T39 CauseOf GOF,contribute
R34 T34 T33 ThemeOf p53,GOF
R35 T37 T36 ThemeOf expression,upregulate
R36 T37 T39 ThemeOf expression,contribute
R37 T40 T37 ThemeOf tumorigenesis,expression
R38 T38 T36 ThemeOf inflammatory mediators,upregulate
R39 T38 T37 ThemeOf inflammatory mediators,expression
R40 T38 T39 ThemeOf inflammatory mediators,contribute
R41 T40 T33 ThemeOf tumorigenesis,GOF
R42 T40 T36 ThemeOf tumorigenesis,upregulate
R43 T40 T39 ThemeOf tumorigenesis,contribute
R44 T42 T41 ThemeOf expression,Elevated
R45 T43 T41 ThemeOf CXCL5,Elevated
R46 T43 T42 ThemeOf CXCL5,expression
R47 T44 T41 ThemeOf CXCL8,Elevated
R48 T44 T42 ThemeOf CXCL8,expression
R49 T45 T41 ThemeOf CXCL12,Elevated
R50 T45 T42 ThemeOf CXCL12,expression
R51 T46 T42 ThemeOf p53,expression
R52 T47 T48 ThemeOf Transcription,elevated
R53 T50 T48 ThemeOf CXCL8,elevated
R54 T56 T55 ThemeOf presence,enhanced
R55 T57 T56 ThemeOf CXCL5,presence
R56 T58 T55 CauseOf H1299/R273H,enhanced
R57 T58 T59 CauseOf H1299/R273H,increased
R58 T60 T59 ThemeOf transcriptional activity,increased
R59 T62 T61 ThemeOf CXCL5,repression
R60 T64 T63 ThemeOf migration,inhibited
R61 T65 T70 CauseOf knockdown,reduced
R62 T66 T70 CauseOf mutant,reduced
R63 T67 T65 ThemeOf p53,knockdown
R64 T67 T66 ThemeOf p53,mutant
R65 T68 T70 ThemeOf lung cancer,reduced
R66 T69 T70 ThemeOf melanoma,reduced
R67 T72 T70 ThemeOf expression,reduced
R68 T73 T70 ThemeOf cell migration,reduced
R69 T74 T77 CauseOf knockdown,reduced
R76 T80 T77 ThemeOf inflammatory mediators,reduced
R77 T80 T78 ThemeOf inflammatory mediators,expression
R78 T80 T79 ThemeOf inflammatory mediators,targets
R79 T82 T83 ThemeOf expression,elevated
R80 T82 T86 ThemeOf expression,relevance
R81 T88 T91 CauseOf GOF,enhanced
R82 T89 T88 ThemeOf p53,GOF
R83 T90 T88 ThemeOf chemokines,GOF
R84 T90 T91 ThemeOf chemokines,enhanced
R85 T92 T91 ThemeOf motility,enhanced

DisGeNET

Id Subject Object Predicate Lexical cue
T0 204-207 gene:7157 denotes p53
T1 229-242 disease:C0596263 denotes tumorigenesis
T2 204-207 gene:7157 denotes p53
T3 247-257 disease:C0027627 denotes metastasis
T4 204-207 gene:7157 denotes p53
T5 247-257 disease:C2939420 denotes metastasis
T6 695-698 gene:7157 denotes p53
T7 811-824 disease:C0596263 denotes tumorigenesis
R1 T0 T1 associated_with p53,tumorigenesis
R2 T2 T3 associated_with p53,metastasis
R3 T4 T5 associated_with p53,metastasis
R4 T6 T7 associated_with p53,tumorigenesis

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 1408-1419 HP_0100526 denotes lung cancer
T2 1413-1419 HP_0002664 denotes cancer
T3 1423-1431 HP_0002861 denotes melanoma
T4 1715-1725 HP_0100526 denotes lung tumor
T5 1720-1725 HP_0002664 denotes tumor
T6 1784-1790 HP_0002664 denotes cancer

Allie

Id Subject Object Predicate Lexical cue
SS1_22114072_3_0 312-328 expanded denotes gain-of-function
SS2_22114072_3_0 330-333 abbr denotes GOF
SS1_22114072_4_0 469-485 expanded denotes RNA interference
SS2_22114072_4_0 487-491 abbr denotes RNAi
AE1_22114072_3_0 SS1_22114072_3_0 SS2_22114072_3_0 abbreviatedTo gain-of-function,GOF
AE1_22114072_4_0 SS1_22114072_4_0 SS2_22114072_4_0 abbreviatedTo RNA interference,RNAi

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
22114072-10#57#60#gene7157 1401-1404 gene7157 denotes p53
22114072-10#102#107#gene6374 1446-1451 gene6374 denotes CXCL5
22114072-10#64#75#diseaseC0242379 1408-1419 diseaseC0242379 denotes lung cancer
22114072-10#64#75#diseaseC0684249 1408-1419 diseaseC0684249 denotes lung cancer
22114072-10#64#75#diseaseC1306460 1408-1419 diseaseC1306460 denotes lung cancer
22114072-10#64#75#diseaseC0242379 1408-1419 diseaseC0242379 denotes lung cancer
22114072-10#64#75#diseaseC0684249 1408-1419 diseaseC0684249 denotes lung cancer
22114072-10#64#75#diseaseC1306460 1408-1419 diseaseC1306460 denotes lung cancer
22114072-12#9#14#gene6374 1677-1682 gene6374 denotes CXCL5
22114072-12#47#57#diseaseC0024121 1715-1725 diseaseC0024121 denotes lung tumor
22114072-2#42#45#gene7157 204-207 gene7157 denotes p53
22114072-2#85#95#diseaseC0027627 247-257 diseaseC0027627 denotes metastasis
22114072-6#18#21#gene7157 695-698 gene7157 denotes p53
22114072-6#134#147#diseaseC0596263 811-824 diseaseC0596263 denotes tumorigenesis
57#60#gene715764#75#diseaseC0242379 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC0242379 associated_with p53,lung cancer
57#60#gene715764#75#diseaseC0684249 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC0684249 associated_with p53,lung cancer
57#60#gene715764#75#diseaseC1306460 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC1306460 associated_with p53,lung cancer
57#60#gene715764#75#diseaseC0242379 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC0242379 associated_with p53,lung cancer
57#60#gene715764#75#diseaseC0684249 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC0684249 associated_with p53,lung cancer
57#60#gene715764#75#diseaseC1306460 22114072-10#57#60#gene7157 22114072-10#64#75#diseaseC1306460 associated_with p53,lung cancer
102#107#gene637464#75#diseaseC0242379 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC0242379 associated_with CXCL5,lung cancer
102#107#gene637464#75#diseaseC0684249 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC0684249 associated_with CXCL5,lung cancer
102#107#gene637464#75#diseaseC1306460 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC1306460 associated_with CXCL5,lung cancer
102#107#gene637464#75#diseaseC0242379 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC0242379 associated_with CXCL5,lung cancer
102#107#gene637464#75#diseaseC0684249 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC0684249 associated_with CXCL5,lung cancer
102#107#gene637464#75#diseaseC1306460 22114072-10#102#107#gene6374 22114072-10#64#75#diseaseC1306460 associated_with CXCL5,lung cancer
9#14#gene637447#57#diseaseC0024121 22114072-12#9#14#gene6374 22114072-12#47#57#diseaseC0024121 associated_with CXCL5,lung tumor
42#45#gene715785#95#diseaseC0027627 22114072-2#42#45#gene7157 22114072-2#85#95#diseaseC0027627 associated_with p53,metastasis
18#21#gene7157134#147#diseaseC0596263 22114072-6#18#21#gene7157 22114072-6#134#147#diseaseC0596263 associated_with p53,tumorigenesis

kaiyin_test

Id Subject Object Predicate Lexical cue
T1 17-23 Var denotes mutant
T2 24-27 Gene denotes p53
T5 28-39 PosReg denotes upregulates
T6 40-54 MPA denotes CXC chemokines
T3 59-67 PosReg denotes enhances
T4 68-82 CPA denotes cell migration
T7 195-203 Var denotes aberrant
T8 204-216 Protein denotes p53 proteins
T9 221-228 PosReg denotes enhance
T10 229-257 CPA denotes tumorigenesis and metastasis
T11 390-419 Var denotes p53 -R175H, -R273H and -D281G
T12 427-435 PosReg denotes enhanced
T13 436-445 CPA denotes migration
T17 691-698 Var denotes GOF p53
T18 708-718 PosReg denotes upregulate
T19 719-743 MPA denotes CXC-chemokine expression
T21 826-834 PosReg denotes Elevated
T22 835-845 MPA denotes expression
T20 903-916 Var denotes oncogenic p53
T24 918-931 MPA denotes Transcription
T23 936-944 PosReg denotes elevated
T27 948-981 MPA denotes CXCL5 and CXCL8 promoter activity
T26 986-992 PosReg denotes higher
T25 1013-1020 Var denotes GOF p53
T31 1383-1400 Var denotes endogenous mutant
T32 1401-1404 Gene denotes p53
T33 1438-1445 NegReg denotes reduced
T34 1446-1462 MPA denotes CXCL5 expression
T35 1467-1481 CPA denotes cell migration
T36 1527-1533 Var denotes mutant
T37 1534-1537 Gene denotes p53
T38 1558-1565 NegReg denotes reduced
T39 1566-1603 MPA denotes expression of a number of key targets
T42 1677-1693 MPA denotes CXCL5 expression
T40 1703-1711 PosReg denotes elevated
T43 1715-1725 Disease denotes lung tumor
T41 1745-1752 Var denotes GOF p53
R1 T1 T5 CauseOf mutant,upregulates
R11 T11 T12 CauseOf "p53 -R175H, -R273H and -D281G",enhanced
R12 T13 T12 ThemeOf migration,enhanced
R13 T17 T18 CauseOf GOF p53,upregulate
R14 T19 T18 ThemeOf CXC-chemokine expression,upregulate
R15 T20 T21 CauseOf oncogenic p53,Elevated
R16 T22 T21 ThemeOf expression,Elevated
R17 T25 T26 CauseOf GOF p53,higher
R18 T27 T26 ThemeOf CXCL5 and CXCL8 promoter activity,higher
R19 T27 T23 CauseOf CXCL5 and CXCL8 promoter activity,elevated
R2 T6 T5 ThemeOf CXC chemokines,upregulates
R20 T24 T23 ThemeOf Transcription,elevated
R23 T31 T33 CauseOf endogenous mutant,reduced
R24 T34 T33 ThemeOf CXCL5 expression,reduced
R25 T35 T33 ThemeOf cell migration,reduced
R26 T32 T31 ThemeOf p53,endogenous mutant
R27 T36 T38 CauseOf mutant,reduced
R28 T39 T38 ThemeOf expression of a number of key targets,reduced
R29 T37 T36 ThemeOf p53,mutant
R3 T2 T1 ThemeOf p53,mutant
R30 T41 T40 CauseOf GOF p53,elevated
R31 T42 T40 ThemeOf CXCL5 expression,elevated
R32 T43 T40 ThemeOf lung tumor,elevated
R4 T6 T3 CauseOf CXC chemokines,enhances
R5 T4 T3 ThemeOf cell migration,enhances
R6 T7 T9 CauseOf aberrant,enhance
R7 T10 T9 ThemeOf tumorigenesis and metastasis,enhance
R8 T8 T7 ThemeOf p53 proteins,aberrant

name_no

Id Subject Object Predicate Lexical cue
T1 17-23 Var denotes mutant
T2 24-27 Gene denotes p53
T5 28-39 PosReg denotes upregulates
T6 40-54 MPA denotes CXC chemokines
T3 59-67 PosReg denotes enhances
T4 68-82 CPA denotes cell migration
T7 195-203 Var denotes aberrant
T8 204-216 Protein denotes p53 proteins
T9 221-228 PosReg denotes enhance
T10 229-257 CPA denotes tumorigenesis and metastasis
T11 390-419 Var denotes p53 -R175H, -R273H and -D281G
T12 427-435 PosReg denotes enhanced
T13 436-445 CPA denotes migration
T17 691-698 Var denotes GOF p53
T18 708-718 PosReg denotes upregulate
T19 719-743 MPA denotes CXC-chemokine expression
T21 826-834 PosReg denotes Elevated
T22 835-845 MPA denotes expression
T20 903-916 Var denotes oncogenic p53
T24 918-931 MPA denotes Transcription
T23 936-944 PosReg denotes elevated
T27 948-981 MPA denotes CXCL5 and CXCL8 promoter activity
T26 986-992 PosReg denotes higher
T25 1013-1020 Var denotes GOF p53
T31 1383-1400 Var denotes endogenous mutant
T32 1401-1404 Gene denotes p53
T33 1438-1445 NegReg denotes reduced
T34 1446-1462 MPA denotes CXCL5 expression
T35 1467-1481 CPA denotes cell migration
T36 1527-1533 Var denotes mutant
T37 1534-1537 Gene denotes p53
T38 1558-1565 NegReg denotes reduced
T39 1566-1603 MPA denotes expression of a number of key targets
T42 1677-1693 MPA denotes CXCL5 expression
T40 1703-1711 PosReg denotes elevated
T43 1715-1725 Disease denotes lung tumor
T41 1745-1752 Var denotes GOF p53
R1 T1 T5 CauseOf mutant,upregulates
R11 T11 T12 CauseOf "p53 -R175H, -R273H and -D281G",enhanced
R12 T13 T12 ThemeOf migration,enhanced
R13 T17 T18 CauseOf GOF p53,upregulate
R14 T19 T18 ThemeOf CXC-chemokine expression,upregulate
R15 T20 T21 CauseOf oncogenic p53,Elevated
R16 T22 T21 ThemeOf expression,Elevated
R17 T25 T26 CauseOf GOF p53,higher
R18 T27 T26 ThemeOf CXCL5 and CXCL8 promoter activity,higher
R19 T27 T23 CauseOf CXCL5 and CXCL8 promoter activity,elevated
R2 T6 T5 ThemeOf CXC chemokines,upregulates
R20 T24 T23 ThemeOf Transcription,elevated
R23 T31 T33 CauseOf endogenous mutant,reduced
R24 T34 T33 ThemeOf CXCL5 expression,reduced
R25 T35 T33 ThemeOf cell migration,reduced
R26 T32 T31 ThemeOf p53,endogenous mutant
R27 T36 T38 CauseOf mutant,reduced
R28 T39 T38 ThemeOf expression of a number of key targets,reduced
R29 T37 T36 ThemeOf p53,mutant
R3 T2 T1 ThemeOf p53,mutant
R30 T41 T40 CauseOf GOF p53,elevated
R31 T42 T40 ThemeOf CXCL5 expression,elevated
R32 T43 T40 ThemeOf lung tumor,elevated
R4 T6 T3 CauseOf CXC chemokines,enhances
R5 T4 T3 ThemeOf cell migration,enhances
R6 T7 T9 CauseOf aberrant,enhance
R7 T10 T9 ThemeOf tumorigenesis and metastasis,enhance
R8 T8 T7 ThemeOf p53 proteins,aberrant