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PubMed:21799811 JSONTXT

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TEST-DiseaseOrPhenotypicFeature

Id Subject Object Predicate Lexical cue #label
T1 66-82 DiseaseOrPhenotypicFeature denotes male infertility D007248
T2 383-397 DiseaseOrPhenotypicFeature denotes infertile male D007248
T3 965-981 DiseaseOrPhenotypicFeature denotes male infertility D007248
T4 1676-1692 DiseaseOrPhenotypicFeature denotes male infertility D007248
T5 1765-1781 DiseaseOrPhenotypicFeature denotes male infertility D007248
T6 1881-1897 DiseaseOrPhenotypicFeature denotes male infertility D007248

TEST-ChemicalEntity

Id Subject Object Predicate Lexical cue ID:
T1 149-174 ChemicalEntity denotes Methylenetetrahydrofolate http://purl.obolibrary.org/obo/CHEBI_25297
T2 175-184 ChemicalEntity denotes reductase D010088
T3 219-225 ChemicalEntity denotes folate D005492|http://purl.obolibrary.org/obo/CHEBI_67011|http://purl.obolibrary.org/obo/CHEBI_62501|http://purl.obolibrary.org/obo/CHEBI_37445
T7 230-240 ChemicalEntity denotes methionine http://purl.obolibrary.org/obo/CHEBI_64558|http://purl.obolibrary.org/obo/CHEBI_16811

Test-SequenceVariant

Id Subject Object Predicate Lexical cue
T1 360-364 SequenceVariant denotes 677C
T2 942-946 SequenceVariant denotes 677C
T3 1651-1655 SequenceVariant denotes 677C
T4 1720-1724 SequenceVariant denotes 677C

Test-GeneOrGeneProduct

Id Subject Object Predicate Lexical cue
T1 50-55 GeneOrGeneProduct denotes MTHFR
T2 149-184 GeneOrGeneProduct denotes Methylenetetrahydrofolate reductase
T3 186-191 GeneOrGeneProduct denotes MTHFR
T4 230-251 GeneOrGeneProduct denotes methionine metabolism
T5 349-354 GeneOrGeneProduct denotes MTHFR
T6 561-564 GeneOrGeneProduct denotes 837
T7 1204-1208 GeneOrGeneProduct denotes Meta
T8 1252-1256 GeneOrGeneProduct denotes Meta

Test-merged-2

Id Subject Object Predicate Lexical cue #label ID:
T31049 360-364 SequenceVariant denotes 677C
T43662 942-946 SequenceVariant denotes 677C
T7806 1651-1655 SequenceVariant denotes 677C
T40997 1720-1724 SequenceVariant denotes 677C
T17349 149-174 ChemicalEntity denotes Methylenetetrahydrofolate http://purl.obolibrary.org/obo/CHEBI_25297
T16768 175-184 ChemicalEntity denotes reductase D010088
T90496 219-225 ChemicalEntity denotes folate D005492|http://purl.obolibrary.org/obo/CHEBI_67011|http://purl.obolibrary.org/obo/CHEBI_62501|http://purl.obolibrary.org/obo/CHEBI_37445
T63539 230-240 ChemicalEntity denotes methionine http://purl.obolibrary.org/obo/CHEBI_64558|http://purl.obolibrary.org/obo/CHEBI_16811
T18482 50-55 GeneOrGeneProduct denotes MTHFR
T86137 149-184 GeneOrGeneProduct denotes Methylenetetrahydrofolate reductase
T85937 186-191 GeneOrGeneProduct denotes MTHFR
T30858 230-251 GeneOrGeneProduct denotes methionine metabolism
T81810 349-354 GeneOrGeneProduct denotes MTHFR
T34909 561-564 GeneOrGeneProduct denotes 837
T7 1204-1208 GeneOrGeneProduct denotes Meta
T8 1252-1256 GeneOrGeneProduct denotes Meta
T1 66-82 DiseaseOrPhenotypicFeature denotes male infertility D007248
T2 383-397 DiseaseOrPhenotypicFeature denotes infertile male D007248
T3 965-981 DiseaseOrPhenotypicFeature denotes male infertility D007248
T4 1676-1692 DiseaseOrPhenotypicFeature denotes male infertility D007248
T5 1765-1781 DiseaseOrPhenotypicFeature denotes male infertility D007248
T6 1881-1897 DiseaseOrPhenotypicFeature denotes male infertility D007248

Test-merged

Id Subject Object Predicate Lexical cue #label ID:
T6 1881-1897 DiseaseOrPhenotypicFeature denotes male infertility D007248
T5 1765-1781 DiseaseOrPhenotypicFeature denotes male infertility D007248
T4 1676-1692 DiseaseOrPhenotypicFeature denotes male infertility D007248
T3 965-981 DiseaseOrPhenotypicFeature denotes male infertility D007248
T2 383-397 DiseaseOrPhenotypicFeature denotes infertile male D007248
T1 66-82 DiseaseOrPhenotypicFeature denotes male infertility D007248
T8 1252-1256 GeneOrGeneProduct denotes Meta
T7 1204-1208 GeneOrGeneProduct denotes Meta
T34909 561-564 GeneOrGeneProduct denotes 837
T81810 349-354 GeneOrGeneProduct denotes MTHFR
T30858 230-251 GeneOrGeneProduct denotes methionine metabolism
T85937 186-191 GeneOrGeneProduct denotes MTHFR
T86137 149-184 GeneOrGeneProduct denotes Methylenetetrahydrofolate reductase
T18482 50-55 GeneOrGeneProduct denotes MTHFR
T90496 219-225 ChemicalEntity denotes folate http://purl.obolibrary.org/obo/CHEBI_37445|http://purl.obolibrary.org/obo/CHEBI_62501|http://purl.obolibrary.org/obo/CHEBI_67011|D005492
T40997 1720-1724 SequenceVariant denotes 677C
T7806 1651-1655 SequenceVariant denotes 677C
T43662 942-946 SequenceVariant denotes 677C
T31049 360-364 SequenceVariant denotes 677C

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 383-392 HP_0000789 denotes infertile
T2 383-397 HP_0003251 denotes infertile male

Allie

Id Subject Object Predicate Lexical cue
SS1_21799811_2_0 149-184 expanded denotes Methylenetetrahydrofolate reductase
SS2_21799811_2_0 186-191 abbr denotes MTHFR
SS1_21799811_12_0 1175-1185 expanded denotes odds ratio
SS2_21799811_12_0 1187-1189 abbr denotes OR
SS1_21799811_15_0 1486-1510 expanded denotes overall summary estimate
SS2_21799811_15_0 1512-1514 abbr denotes OR
AE1_21799811_2_0 SS1_21799811_2_0 SS2_21799811_2_0 abbreviatedTo Methylenetetrahydrofolate reductase,MTHFR
AE1_21799811_12_0 SS1_21799811_12_0 SS2_21799811_12_0 abbreviatedTo odds ratio,OR
AE1_21799811_15_0 SS1_21799811_15_0 SS2_21799811_15_0 abbreviatedTo overall summary estimate,OR

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21799811-0#50#55#gene4524 50-55 gene4524 denotes MTHFR
21799811-0#66#82#diseaseC0021364 66-82 diseaseC0021364 denotes male infertility
50#55#gene452466#82#diseaseC0021364 21799811-0#50#55#gene4524 21799811-0#66#82#diseaseC0021364 associated_with MTHFR,male infertility

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 22-29 DNAMutation:|SUB|C|677|T denotes 677 C>T
T2 360-366 DNAMutation:|SUB|C|677|T denotes 677C>T
T3 942-948 DNAMutation:|SUB|C|677|T denotes 677C>T
T4 1651-1657 DNAMutation:|SUB|C|677|T denotes 677C>T
T5 1720-1726 DNAMutation:|SUB|C|677|T denotes 677C>T