PubMed:21211797
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/21211797","sourcedb":"PubMed","sourceid":"21211797","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/21211797","text":"Mannose binding lectin 2 haplotypes do not affect the progression of coronary atherosclerosis in men with proven coronary artery disease treated with pravastatin.\nOBJECTIVE: Mannose binding lectin (MBL) is one of the three initiators of complement activation. Polymorphisms of the MBL2 gene and its promoter, and especially haplotypes, determine MBL plasma levels. MBL deficiency has been associated with the development of atherosclerosis. We evaluated whether the rate of angiographic progression of coronary atherosclerosis during pravastatin treatment was associated with MBL2 haplotypes in REGRESS, a placebo-controlled 2 years intervention study.\nMETHODS: Three polymorphic sites in exon 1 (rs1800450, rs1800451 and rs5030737) of the MBL2 gene and 2 sites (rs7096206 and rs11003125) in the promoter region were genotyped in 398 subjects. Genotyping was performed using Applied Biosystems® TaqMan® Genotyping Assays. We divided the group in high, intermediate and low MBL2 secretor haplotypes. Quantitative coronary angiography was performed. Endpoints were mean segment diameter (MSD) and minimum obstruction diameter (MOD) established by quantitative coronary angiography.\nRESULTS: At inclusion, 50.1, 31.7 and 17.6% of the patients in the REGRESS cohort carried the high, intermediate and low MBL2 secretor haplotypes, respectively. In 0.6% of the patients, the haplotype was not informative. There were no baseline differences between the MBL2 haplotypes for age, BMI, lipid levels, leukocyte counts, CRP, MSD and MOD. The intermediate MBL2 placebo group showed the greatest increase in MSD compared to the low MBL2 group (P=0.03). No difference was found for the change in MOD. No significant interaction between MBL2 haplotype groups and pravastatin therapy was observed.\nCONCLUSION: In men with proven coronary artery disease, MBL2 secretor haplotypes are not associated to the rate of progression of coronary sclerosis nor does pravastatin treatment influence progression based on MBL2 haplotypes.","tracks":[{"project":"Allie","denotations":[{"id":"SS1_21211797_2_0","span":{"begin":281,"end":635},"obj":"expanded"},{"id":"SS2_21211797_2_0","span":{"begin":740,"end":743},"obj":"abbr"},{"id":"SS1_21211797_11_0","span":{"begin":1063,"end":1084},"obj":"expanded"},{"id":"SS2_21211797_11_0","span":{"begin":1086,"end":1089},"obj":"abbr"},{"id":"SS1_21211797_11_1","span":{"begin":1095,"end":1123},"obj":"expanded"},{"id":"SS2_21211797_11_1","span":{"begin":1125,"end":1128},"obj":"abbr"}],"relations":[{"id":"AE1_21211797_2_0","pred":"abbreviatedTo","subj":"SS1_21211797_2_0","obj":"SS2_21211797_2_0"},{"id":"AE1_21211797_11_0","pred":"abbreviatedTo","subj":"SS1_21211797_11_0","obj":"SS2_21211797_11_0"},{"id":"AE1_21211797_11_1","pred":"abbreviatedTo","subj":"SS1_21211797_11_1","obj":"SS2_21211797_11_1"}],"attributes":[{"subj":"SS1_21211797_2_0","pred":"source","obj":"Allie"},{"subj":"SS2_21211797_2_0","pred":"source","obj":"Allie"},{"subj":"SS1_21211797_11_0","pred":"source","obj":"Allie"},{"subj":"SS2_21211797_11_0","pred":"source","obj":"Allie"},{"subj":"SS1_21211797_11_1","pred":"source","obj":"Allie"},{"subj":"SS2_21211797_11_1","pred":"source","obj":"Allie"}]},{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":113,"end":128},"obj":"http://purl.obolibrary.org/obo/UBERON_0001621"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":1814,"end":1829},"obj":"http://purl.obolibrary.org/obo/UBERON_0001621"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":122,"end":128},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":1823,"end":1829},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"performance-test"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":424,"end":439},"obj":"HP_0002621"},{"id":"T2","span":{"begin":502,"end":526},"obj":"HP_0004929"},{"id":"T3","span":{"begin":511,"end":526},"obj":"HP_0002621"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":1839,"end":1843},"obj":"gene:4153"},{"id":"T1","span":{"begin":1913,"end":1931},"obj":"disease:C0010054"},{"id":"T2","span":{"begin":1994,"end":1998},"obj":"gene:4153"},{"id":"T3","span":{"begin":1913,"end":1931},"obj":"disease:C0010054"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":162},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":163,"end":173},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":174,"end":259},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":260,"end":364},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":365,"end":440},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":441,"end":652},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":653,"end":661},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":662,"end":843},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":844,"end":921},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":922,"end":998},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":999,"end":1047},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":1048,"end":1179},"obj":"Sentence"},{"id":"TextSentencer_T13","span":{"begin":1180,"end":1188},"obj":"Sentence"},{"id":"TextSentencer_T14","span":{"begin":1189,"end":1340},"obj":"Sentence"},{"id":"TextSentencer_T15","span":{"begin":1341,"end":1400},"obj":"Sentence"},{"id":"TextSentencer_T16","span":{"begin":1401,"end":1527},"obj":"Sentence"},{"id":"TextSentencer_T17","span":{"begin":1528,"end":1640},"obj":"Sentence"},{"id":"TextSentencer_T18","span":{"begin":1641,"end":1687},"obj":"Sentence"},{"id":"TextSentencer_T19","span":{"begin":1688,"end":1782},"obj":"Sentence"},{"id":"TextSentencer_T20","span":{"begin":1783,"end":1794},"obj":"Sentence"},{"id":"TextSentencer_T21","span":{"begin":1795,"end":2010},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":162},"obj":"Sentence"},{"id":"T2","span":{"begin":163,"end":173},"obj":"Sentence"},{"id":"T3","span":{"begin":174,"end":259},"obj":"Sentence"},{"id":"T4","span":{"begin":260,"end":364},"obj":"Sentence"},{"id":"T5","span":{"begin":365,"end":440},"obj":"Sentence"},{"id":"T6","span":{"begin":441,"end":652},"obj":"Sentence"},{"id":"T7","span":{"begin":653,"end":661},"obj":"Sentence"},{"id":"T8","span":{"begin":662,"end":843},"obj":"Sentence"},{"id":"T9","span":{"begin":844,"end":921},"obj":"Sentence"},{"id":"T10","span":{"begin":922,"end":998},"obj":"Sentence"},{"id":"T11","span":{"begin":999,"end":1047},"obj":"Sentence"},{"id":"T12","span":{"begin":1048,"end":1179},"obj":"Sentence"},{"id":"T13","span":{"begin":1180,"end":1188},"obj":"Sentence"},{"id":"T14","span":{"begin":1189,"end":1340},"obj":"Sentence"},{"id":"T15","span":{"begin":1341,"end":1400},"obj":"Sentence"},{"id":"T16","span":{"begin":1401,"end":1527},"obj":"Sentence"},{"id":"T17","span":{"begin":1528,"end":1640},"obj":"Sentence"},{"id":"T18","span":{"begin":1641,"end":1687},"obj":"Sentence"},{"id":"T19","span":{"begin":1688,"end":1782},"obj":"Sentence"},{"id":"T20","span":{"begin":1783,"end":1794},"obj":"Sentence"},{"id":"T21","span":{"begin":1795,"end":2010},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T10","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T11","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T12","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T13","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T14","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T15","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T16","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T17","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T18","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T19","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T20","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T21","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"},{"subj":"T15","pred":"source","obj":"sentences"},{"subj":"T16","pred":"source","obj":"sentences"},{"subj":"T17","pred":"source","obj":"sentences"},{"subj":"T18","pred":"source","obj":"sentences"},{"subj":"T19","pred":"source","obj":"sentences"},{"subj":"T20","pred":"source","obj":"sentences"},{"subj":"T21","pred":"source","obj":"sentences"}]},{"project":"UBERON-AE","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":113,"end":128},"obj":"http://purl.obolibrary.org/obo/UBERON_0001621"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":1814,"end":1829},"obj":"http://purl.obolibrary.org/obo/UBERON_0001621"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":122,"end":128},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":1823,"end":1829},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"UBERON-AE"}]},{"project":"DisGeNet-2017-sample","denotations":[{"id":"T1709","span":{"begin":0,"end":24},"obj":"gene:4153"},{"id":"T1710","span":{"begin":113,"end":136},"obj":"disease:C0010054"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T1709","obj":"T1710"},{"id":"R2","pred":"associated_with","subj":"T1709","obj":"T1710"},{"id":"R3","pred":"associated_with","subj":"T1709","obj":"T1710"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T1709","pred":"source","obj":"DisGeNet-2017-sample"},{"subj":"T1710","pred":"source","obj":"DisGeNet-2017-sample"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"21211797-0#0#24#gene4153","span":{"begin":0,"end":24},"obj":"gene4153"},{"id":"21211797-0#113#136#diseaseC0010054","span":{"begin":113,"end":136},"obj":"diseaseC0010054"},{"id":"21211797-0#113#136#diseaseC0010068","span":{"begin":113,"end":136},"obj":"diseaseC0010068"},{"id":"21211797-0#113#136#diseaseC1956346","span":{"begin":113,"end":136},"obj":"diseaseC1956346"},{"id":"21211797-0#69#93#diseaseC0010054","span":{"begin":69,"end":93},"obj":"diseaseC0010054"}],"relations":[{"id":"0#24#gene4153113#136#diseaseC0010054","pred":"associated_with","subj":"21211797-0#0#24#gene4153","obj":"21211797-0#113#136#diseaseC0010054"},{"id":"0#24#gene4153113#136#diseaseC0010068","pred":"associated_with","subj":"21211797-0#0#24#gene4153","obj":"21211797-0#113#136#diseaseC0010068"},{"id":"0#24#gene4153113#136#diseaseC1956346","pred":"associated_with","subj":"21211797-0#0#24#gene4153","obj":"21211797-0#113#136#diseaseC1956346"},{"id":"0#24#gene415369#93#diseaseC0010054","pred":"associated_with","subj":"21211797-0#0#24#gene4153","obj":"21211797-0#69#93#diseaseC0010054"}],"attributes":[{"subj":"21211797-0#0#24#gene4153","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21211797-0#113#136#diseaseC0010054","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21211797-0#113#136#diseaseC0010068","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21211797-0#113#136#diseaseC1956346","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21211797-0#69#93#diseaseC0010054","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"PubTator4TogoVar","denotations":[{"id":"51","span":{"begin":697,"end":706},"obj":"SNP"},{"id":"52","span":{"begin":708,"end":717},"obj":"SNP"},{"id":"53","span":{"begin":722,"end":731},"obj":"SNP"},{"id":"55","span":{"begin":763,"end":772},"obj":"SNP"},{"id":"56","span":{"begin":777,"end":787},"obj":"SNP"}],"attributes":[{"id":"A51","pred":"resolved_to","subj":"51","obj":"tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606"},{"id":"A52","pred":"resolved_to","subj":"52","obj":"tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606"},{"id":"A53","pred":"resolved_to","subj":"53","obj":"tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606"},{"id":"A55","pred":"resolved_to","subj":"55","obj":"tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606"},{"id":"A56","pred":"resolved_to","subj":"56","obj":"tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606"},{"subj":"51","pred":"source","obj":"PubTator4TogoVar"},{"subj":"52","pred":"source","obj":"PubTator4TogoVar"},{"subj":"53","pred":"source","obj":"PubTator4TogoVar"},{"subj":"55","pred":"source","obj":"PubTator4TogoVar"},{"subj":"56","pred":"source","obj":"PubTator4TogoVar"}]},{"project":"PubTatorOnTogoVar","denotations":[{"id":"51","span":{"begin":697,"end":706},"obj":"SNP"},{"id":"52","span":{"begin":708,"end":717},"obj":"SNP"},{"id":"53","span":{"begin":722,"end":731},"obj":"SNP"},{"id":"55","span":{"begin":763,"end":772},"obj":"SNP"},{"id":"56","span":{"begin":777,"end":787},"obj":"SNP"},{"id":"T1","span":{"begin":697,"end":706},"obj":"SNP"},{"id":"T2","span":{"begin":708,"end":717},"obj":"SNP"},{"id":"T3","span":{"begin":722,"end":731},"obj":"SNP"},{"id":"T4","span":{"begin":763,"end":772},"obj":"SNP"},{"id":"T5","span":{"begin":777,"end":787},"obj":"SNP"}],"attributes":[{"id":"A51","pred":"resolved_to","subj":"51","obj":"tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606"},{"id":"A52","pred":"resolved_to","subj":"52","obj":"tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606"},{"id":"A53","pred":"resolved_to","subj":"53","obj":"tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606"},{"id":"A55","pred":"resolved_to","subj":"55","obj":"tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606"},{"id":"A56","pred":"resolved_to","subj":"56","obj":"tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606"},{"id":"A1","pred":"resolved_to","subj":"T1","obj":"tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606"},{"id":"A2","pred":"resolved_to","subj":"T2","obj":"tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606"},{"id":"A3","pred":"resolved_to","subj":"T3","obj":"tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606"},{"id":"A4","pred":"resolved_to","subj":"T4","obj":"tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606"},{"id":"A5","pred":"resolved_to","subj":"T5","obj":"tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606"},{"subj":"51","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"52","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"53","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"55","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"56","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"T1","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"T2","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"T3","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"T4","pred":"source","obj":"PubTatorOnTogoVar"},{"subj":"T5","pred":"source","obj":"PubTatorOnTogoVar"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Allie","color":"#b093ec","default":true},{"id":"performance-test","color":"#93ec96"},{"id":"PubmedHPO","color":"#ec93a9"},{"id":"DisGeNET","color":"#93c3ec"},{"id":"sentences","color":"#ddec93"},{"id":"UBERON-AE","color":"#e093ec"},{"id":"DisGeNet-2017-sample","color":"#93ecc6"},{"id":"DisGeNET5_gene_disease","color":"#ecac93"},{"id":"PubTator4TogoVar","color":"#9393ec"},{"id":"PubTatorOnTogoVar","color":"#adec93"}]}]}}