PubMed:21211797
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-162 | Sentence | denotes | Mannose binding lectin 2 haplotypes do not affect the progression of coronary atherosclerosis in men with proven coronary artery disease treated with pravastatin. |
| TextSentencer_T2 | 163-173 | Sentence | denotes | OBJECTIVE: |
| TextSentencer_T3 | 174-259 | Sentence | denotes | Mannose binding lectin (MBL) is one of the three initiators of complement activation. |
| TextSentencer_T4 | 260-364 | Sentence | denotes | Polymorphisms of the MBL2 gene and its promoter, and especially haplotypes, determine MBL plasma levels. |
| TextSentencer_T5 | 365-440 | Sentence | denotes | MBL deficiency has been associated with the development of atherosclerosis. |
| TextSentencer_T6 | 441-652 | Sentence | denotes | We evaluated whether the rate of angiographic progression of coronary atherosclerosis during pravastatin treatment was associated with MBL2 haplotypes in REGRESS, a placebo-controlled 2 years intervention study. |
| TextSentencer_T7 | 653-661 | Sentence | denotes | METHODS: |
| TextSentencer_T8 | 662-843 | Sentence | denotes | Three polymorphic sites in exon 1 (rs1800450, rs1800451 and rs5030737) of the MBL2 gene and 2 sites (rs7096206 and rs11003125) in the promoter region were genotyped in 398 subjects. |
| TextSentencer_T9 | 844-921 | Sentence | denotes | Genotyping was performed using Applied Biosystems® TaqMan® Genotyping Assays. |
| TextSentencer_T10 | 922-998 | Sentence | denotes | We divided the group in high, intermediate and low MBL2 secretor haplotypes. |
| TextSentencer_T11 | 999-1047 | Sentence | denotes | Quantitative coronary angiography was performed. |
| TextSentencer_T12 | 1048-1179 | Sentence | denotes | Endpoints were mean segment diameter (MSD) and minimum obstruction diameter (MOD) established by quantitative coronary angiography. |
| TextSentencer_T13 | 1180-1188 | Sentence | denotes | RESULTS: |
| TextSentencer_T14 | 1189-1340 | Sentence | denotes | At inclusion, 50.1, 31.7 and 17.6% of the patients in the REGRESS cohort carried the high, intermediate and low MBL2 secretor haplotypes, respectively. |
| TextSentencer_T15 | 1341-1400 | Sentence | denotes | In 0.6% of the patients, the haplotype was not informative. |
| TextSentencer_T16 | 1401-1527 | Sentence | denotes | There were no baseline differences between the MBL2 haplotypes for age, BMI, lipid levels, leukocyte counts, CRP, MSD and MOD. |
| TextSentencer_T17 | 1528-1640 | Sentence | denotes | The intermediate MBL2 placebo group showed the greatest increase in MSD compared to the low MBL2 group (P=0.03). |
| TextSentencer_T18 | 1641-1687 | Sentence | denotes | No difference was found for the change in MOD. |
| TextSentencer_T19 | 1688-1782 | Sentence | denotes | No significant interaction between MBL2 haplotype groups and pravastatin therapy was observed. |
| TextSentencer_T20 | 1783-1794 | Sentence | denotes | CONCLUSION: |
| TextSentencer_T21 | 1795-2010 | Sentence | denotes | In men with proven coronary artery disease, MBL2 secretor haplotypes are not associated to the rate of progression of coronary sclerosis nor does pravastatin treatment influence progression based on MBL2 haplotypes. |
| T1 | 0-162 | Sentence | denotes | Mannose binding lectin 2 haplotypes do not affect the progression of coronary atherosclerosis in men with proven coronary artery disease treated with pravastatin. |
| T2 | 163-173 | Sentence | denotes | OBJECTIVE: |
| T3 | 174-259 | Sentence | denotes | Mannose binding lectin (MBL) is one of the three initiators of complement activation. |
| T4 | 260-364 | Sentence | denotes | Polymorphisms of the MBL2 gene and its promoter, and especially haplotypes, determine MBL plasma levels. |
| T5 | 365-440 | Sentence | denotes | MBL deficiency has been associated with the development of atherosclerosis. |
| T6 | 441-652 | Sentence | denotes | We evaluated whether the rate of angiographic progression of coronary atherosclerosis during pravastatin treatment was associated with MBL2 haplotypes in REGRESS, a placebo-controlled 2 years intervention study. |
| T7 | 653-661 | Sentence | denotes | METHODS: |
| T8 | 662-843 | Sentence | denotes | Three polymorphic sites in exon 1 (rs1800450, rs1800451 and rs5030737) of the MBL2 gene and 2 sites (rs7096206 and rs11003125) in the promoter region were genotyped in 398 subjects. |
| T9 | 844-921 | Sentence | denotes | Genotyping was performed using Applied Biosystems® TaqMan® Genotyping Assays. |
| T10 | 922-998 | Sentence | denotes | We divided the group in high, intermediate and low MBL2 secretor haplotypes. |
| T11 | 999-1047 | Sentence | denotes | Quantitative coronary angiography was performed. |
| T12 | 1048-1179 | Sentence | denotes | Endpoints were mean segment diameter (MSD) and minimum obstruction diameter (MOD) established by quantitative coronary angiography. |
| T13 | 1180-1188 | Sentence | denotes | RESULTS: |
| T14 | 1189-1340 | Sentence | denotes | At inclusion, 50.1, 31.7 and 17.6% of the patients in the REGRESS cohort carried the high, intermediate and low MBL2 secretor haplotypes, respectively. |
| T15 | 1341-1400 | Sentence | denotes | In 0.6% of the patients, the haplotype was not informative. |
| T16 | 1401-1527 | Sentence | denotes | There were no baseline differences between the MBL2 haplotypes for age, BMI, lipid levels, leukocyte counts, CRP, MSD and MOD. |
| T17 | 1528-1640 | Sentence | denotes | The intermediate MBL2 placebo group showed the greatest increase in MSD compared to the low MBL2 group (P=0.03). |
| T18 | 1641-1687 | Sentence | denotes | No difference was found for the change in MOD. |
| T19 | 1688-1782 | Sentence | denotes | No significant interaction between MBL2 haplotype groups and pravastatin therapy was observed. |
| T20 | 1783-1794 | Sentence | denotes | CONCLUSION: |
| T21 | 1795-2010 | Sentence | denotes | In men with proven coronary artery disease, MBL2 secretor haplotypes are not associated to the rate of progression of coronary sclerosis nor does pravastatin treatment influence progression based on MBL2 haplotypes. |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 1839-1843 | gene:4153 | denotes | MBL2 |
| T1 | 1913-1931 | disease:C0010054 | denotes | coronary sclerosis |
| T2 | 1994-1998 | gene:4153 | denotes | MBL2 |
| T3 | 1913-1931 | disease:C0010054 | denotes | coronary sclerosis |
| R1 | T0 | T1 | associated_with | MBL2,coronary sclerosis |
| R2 | T2 | T3 | associated_with | MBL2,coronary sclerosis |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 424-439 | HP_0002621 | denotes | atherosclerosis |
| T2 | 502-526 | HP_0004929 | denotes | coronary atherosclerosis |
| T3 | 511-526 | HP_0002621 | denotes | atherosclerosis |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_21211797_2_0 | 281-635 | expanded | denotes | MBL2 gene and its promoter, and especially haplotypes, determine MBL plasma levels. MBL deficiency has been associated with the development of atherosclerosis. We evaluated whether the rate of angiographic progression of coronary atherosclerosis during pravastatin treatment was associated with MBL2 haplotypes in REGRESS, a placebo-controlled 2 years in |
| SS2_21211797_2_0 | 740-743 | abbr | denotes | MBL |
| SS1_21211797_11_0 | 1063-1084 | expanded | denotes | mean segment diameter |
| SS2_21211797_11_0 | 1086-1089 | abbr | denotes | MSD |
| SS1_21211797_11_1 | 1095-1123 | expanded | denotes | minimum obstruction diameter |
| SS2_21211797_11_1 | 1125-1128 | abbr | denotes | MOD |
| AE1_21211797_2_0 | SS1_21211797_2_0 | SS2_21211797_2_0 | abbreviatedTo | "MBL2 gene and its promoter, and especially haplotypes, determine MBL plasma levels. MBL deficiency has been associated with the development of atherosclerosis. We evaluated whether the rate of angiographic progression of coronary atherosclerosis during pravastatin treatment was associated with MBL2 haplotypes in REGRESS, a placebo-controlled 2 years in",MBL |
| AE1_21211797_11_0 | SS1_21211797_11_0 | SS2_21211797_11_0 | abbreviatedTo | mean segment diameter,MSD |
| AE1_21211797_11_1 | SS1_21211797_11_1 | SS2_21211797_11_1 | abbreviatedTo | minimum obstruction diameter,MOD |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 21211797-0#0#24#gene4153 | 0-24 | gene4153 | denotes | Mannose binding lectin 2 |
| 21211797-0#113#136#diseaseC0010054 | 113-136 | diseaseC0010054 | denotes | coronary artery disease |
| 21211797-0#113#136#diseaseC0010068 | 113-136 | diseaseC0010068 | denotes | coronary artery disease |
| 21211797-0#113#136#diseaseC1956346 | 113-136 | diseaseC1956346 | denotes | coronary artery disease |
| 21211797-0#69#93#diseaseC0010054 | 69-93 | diseaseC0010054 | denotes | coronary atherosclerosis |
| 0#24#gene4153113#136#diseaseC0010054 | 21211797-0#0#24#gene4153 | 21211797-0#113#136#diseaseC0010054 | associated_with | Mannose binding lectin 2,coronary artery disease |
| 0#24#gene4153113#136#diseaseC0010068 | 21211797-0#0#24#gene4153 | 21211797-0#113#136#diseaseC0010068 | associated_with | Mannose binding lectin 2,coronary artery disease |
| 0#24#gene4153113#136#diseaseC1956346 | 21211797-0#0#24#gene4153 | 21211797-0#113#136#diseaseC1956346 | associated_with | Mannose binding lectin 2,coronary artery disease |
| 0#24#gene415369#93#diseaseC0010054 | 21211797-0#0#24#gene4153 | 21211797-0#69#93#diseaseC0010054 | associated_with | Mannose binding lectin 2,coronary atherosclerosis |
DisGeNet-2017-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1709 | 0-24 | gene:4153 | denotes | Mannose binding lectin 2 |
| T1710 | 113-136 | disease:C0010054 | denotes | coronary artery disease |
| R1 | T1709 | T1710 | associated_with | Mannose binding lectin 2,coronary artery disease |
| R2 | T1709 | T1710 | associated_with | Mannose binding lectin 2,coronary artery disease |
| R3 | T1709 | T1710 | associated_with | Mannose binding lectin 2,coronary artery disease |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 113-128 | http://purl.obolibrary.org/obo/UBERON_0001621 | denotes | coronary artery |
| PD-UBERON-AE-B_T2 | 1814-1829 | http://purl.obolibrary.org/obo/UBERON_0001621 | denotes | coronary artery |
| PD-UBERON-AE-B_T3 | 122-128 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
| PD-UBERON-AE-B_T4 | 1823-1829 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 113-128 | http://purl.obolibrary.org/obo/UBERON_0001621 | denotes | coronary artery |
| PD-UBERON-AE-B_T2 | 1814-1829 | http://purl.obolibrary.org/obo/UBERON_0001621 | denotes | coronary artery |
| PD-UBERON-AE-B_T3 | 122-128 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
| PD-UBERON-AE-B_T4 | 1823-1829 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
PubTator4TogoVar
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 51 | 697-706 | SNP | denotes | rs1800450 | tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606 |
| 52 | 708-717 | SNP | denotes | rs1800451 | tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606 |
| 53 | 722-731 | SNP | denotes | rs5030737 | tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606 |
| 55 | 763-772 | SNP | denotes | rs7096206 | tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606 |
| 56 | 777-787 | SNP | denotes | rs11003125 | tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606 |
PubTatorOnTogoVar
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 51 | 697-706 | SNP | denotes | rs1800450 | tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606 |
| 52 | 708-717 | SNP | denotes | rs1800451 | tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606 |
| 53 | 722-731 | SNP | denotes | rs5030737 | tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606 |
| 55 | 763-772 | SNP | denotes | rs7096206 | tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606 |
| 56 | 777-787 | SNP | denotes | rs11003125 | tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606 |
| T1 | 697-706 | SNP | denotes | rs1800450 | tmVar:rs1800450;VariantGroup:2;CorrespondingGene:4153;RS#:1800450;CorrespondingSpecies:9606 |
| T2 | 708-717 | SNP | denotes | rs1800451 | tmVar:rs1800451;VariantGroup:1;CorrespondingGene:4153;RS#:1800451;CorrespondingSpecies:9606 |
| T3 | 722-731 | SNP | denotes | rs5030737 | tmVar:rs5030737;VariantGroup:4;CorrespondingGene:4153;RS#:5030737;CorrespondingSpecies:9606 |
| T4 | 763-772 | SNP | denotes | rs7096206 | tmVar:rs7096206;VariantGroup:0;CorrespondingGene:4153;RS#:7096206;CorrespondingSpecies:9606 |
| T5 | 777-787 | SNP | denotes | rs11003125 | tmVar:rs11003125;VariantGroup:3;CorrespondingGene:4153;RS#:11003125;CorrespondingSpecies:9606 |