PubMed:20854438 / 1002-1262
Annnotations
PubTator4TogoVar
| Id | Subject | Object | Predicate | Lexical cue | proteinmutation |
|---|---|---|---|---|---|
| 20854438_0 | 180-229 | ProteinMutation | denotes | glycine to arginine substitution at amino acid 86 | rs28937888 |
| 20854438_1 | 231-235 | ProteinMutation | denotes | G86R | rs28937888 |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 0-5 | OrganismTaxon | denotes | Human | NCBItxid:9606 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 0-260 | Sentence | denotes | Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 8108 | 0-5 | OrganismTaxon | denotes | Human | NCBITaxon:9606 |
| 8109 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | MESH:D007645 |
| 8110 | 103-140 | SequenceVariant | denotes | G to A substitution in nucleotide 256 | DBSNP:rs28937888 |
| 8111 | 148-154 | GeneOrGeneProduct | denotes | SLURP1 | NCBIGene:57152 |
| 8112 | 180-229 | SequenceVariant | denotes | glycine to arginine substitution at amino acid 86 | DBSNP:rs28937888 |
| 8113 | 231-235 | SequenceVariant | denotes | G86R | DBSNP:rs28937888 |
| 8114 | 244-251 | GeneOrGeneProduct | denotes | SLURP-1 | NCBIGene:57152 |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 231-235 | SequenceVariant | denotes | G86R |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35 | 35-40 | GeneOrGeneProduct | denotes | cells |
| T36 | 148-154 | GeneOrGeneProduct | denotes | SLURP1 |
| T37 | 216-226 | GeneOrGeneProduct | denotes | amino acid |
| T38 | 244-251 | GeneOrGeneProduct | denotes | SLURP-1 |
| T39 | 252-259 | GeneOrGeneProduct | denotes | protein |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 148-154 | GeneOrGeneProduct | denotes | SLURP1 |
| T24 | 216-226 | GeneOrGeneProduct | denotes | amino acid |
| T25 | 244-251 | GeneOrGeneProduct | denotes | SLURP-1 |
| T26 | 252-259 | GeneOrGeneProduct | denotes | protein |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T7 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | D007645 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16 | 148-154 | GeneOrGeneProduct | denotes | SLURP1 |
| T17 | 244-251 | GeneOrGeneProduct | denotes | SLURP-1 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T9 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | 0009552 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T8 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | D007645 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T8 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | D007645 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-5 | OrganismTaxon | denotes | Human |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T4 | 180-187 | ChemicalEntity | denotes | glycine | http://purl.obolibrary.org/obo/CHEBI_57305|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_15428 |
| T7 | 191-199 | ChemicalEntity | denotes | arginine | http://purl.obolibrary.org/obo/CHEBI_32696|http://purl.obolibrary.org/obo/CHEBI_29016|http://purl.obolibrary.org/obo/CHEBI_16467 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T7 | 191-199 | ChemicalEntity | denotes | arginine | http://purl.obolibrary.org/obo/CHEBI_16467|http://purl.obolibrary.org/obo/CHEBI_29016|http://purl.obolibrary.org/obo/CHEBI_32696 | |
| T4 | 180-187 | ChemicalEntity | denotes | glycine | http://purl.obolibrary.org/obo/CHEBI_15428|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_57305 | |
| T17 | 244-251 | GeneOrGeneProduct | denotes | SLURP-1 | ||
| T16 | 148-154 | GeneOrGeneProduct | denotes | SLURP1 | ||
| T94657 | 80-83 | DiseaseOrPhenotypicFeature | denotes | MDM | D007645 | |
| T77345 | 0-5 | OrganismTaxon | denotes | Human | ||
| T1064 | 231-235 | SequenceVariant | denotes | G86R |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_20854438_10_0 | 6-40 | expanded | denotes | peripheral blood mononuclear cells |
| SS2_20854438_10_0 | 42-47 | abbr | denotes | PBMCs |
| SS1_20854438_10_1 | 180-229 | expanded | denotes | glycine to arginine substitution at amino acid 86 |
| SS2_20854438_10_1 | 231-235 | abbr | denotes | G86R |
| AE1_20854438_10_0 | SS1_20854438_10_0 | SS2_20854438_10_0 | abbreviatedTo | peripheral blood mononuclear cells,PBMCs |
| AE1_20854438_10_1 | SS1_20854438_10_1 | SS2_20854438_10_1 | abbreviatedTo | glycine to arginine substitution at amino acid 86,G86R |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 20854438-0#60#73#diseaseC0025221 | 2-69 | diseaseC0025221 | denotes | man peripheral blood mononuclear cells (PBMCs) were isolated from a |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 231-235 | ProteinMutation:p|SUB|G|86|R | denotes | G86R |