PubMed:20648600
Annnotations
TEST-DiseaseOrPhenotypicFeature
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 97-108 | DiseaseOrPhenotypicFeature | denotes | hepatitis B | D006509 |
| T2 | 279-290 | DiseaseOrPhenotypicFeature | denotes | hepatitis B | D006509 |
| T3 | 668-680 | DiseaseOrPhenotypicFeature | denotes | co-infection | D060085 |
| T4 | 1086-1093 | DiseaseOrPhenotypicFeature | denotes | viremia | D014766 |
TEST-ChemicalEntity
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 18-28 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 |
| T2 | 173-183 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 |
| T3 | 185-188 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T6 | 194-203 | ChemicalEntity | denotes | tenofovir | D000068698|http://purl.obolibrary.org/obo/CHEBI_63716|http://purl.obolibrary.org/obo/CHEBI_63625|http://purl.obolibrary.org/obo/CHEBI_134504 |
| T10 | 205-208 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T11 | 404-409 | ChemicalEntity | denotes | HBsAg | D006514|ChemicalEntity |
| T13 | 867-870 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T16 | 906-909 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T19 | 915-918 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T20 | 946-949 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T23 | 954-957 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T24 | 987-990 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T27 | 1446-1449 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T28 | 1520-1523 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 |
| T31 | 1644-1651 | ChemicalEntity | denotes | vaccine | D014612 |
| T32 | 1682-1685 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
| T33 | 1740-1743 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 |
TEST-OrganismTaxon
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 63-71 | OrganismTaxon | denotes | patients |
| T2 | 89-92 | OrganismTaxon | denotes | HIV |
| T3 | 245-253 | OrganismTaxon | denotes | patients |
| T4 | 271-274 | OrganismTaxon | denotes | HIV |
| T5 | 279-302 | OrganismTaxon | denotes | hepatitis B virus (HBV) |
| T6 | 335-343 | OrganismTaxon | denotes | patients |
| T7 | 349-352 | OrganismTaxon | denotes | HIV |
| T8 | 368-376 | OrganismTaxon | denotes | Patients |
| T9 | 433-436 | OrganismTaxon | denotes | HBV |
| T10 | 509-512 | OrganismTaxon | denotes | HBV |
| T11 | 654-662 | OrganismTaxon | denotes | patients |
| T12 | 718-721 | OrganismTaxon | denotes | HBV |
| T13 | 744-752 | OrganismTaxon | denotes | patients |
| T14 | 840-848 | OrganismTaxon | denotes | patients |
| T15 | 879-887 | OrganismTaxon | denotes | patients |
| T16 | 1072-1080 | OrganismTaxon | denotes | patients |
| T17 | 1163-1171 | OrganismTaxon | denotes | patients |
| T18 | 1179-1187 | OrganismTaxon | denotes | patients |
| T19 | 1590-1593 | OrganismTaxon | denotes | HBV |
Test-SequenceVariant
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1358-1364 | SequenceVariant | denotes | A1762T |
| T2 | 1366-1372 | SequenceVariant | denotes | G1764A |
| T3 | 1401-1407 | SequenceVariant | denotes | G1896A |
| T4 | 1409-1415 | SequenceVariant | denotes | G1899A |
Test-GeneOrGeneProduct
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1296-1304 | GeneOrGeneProduct | denotes | envelope |
Test-merged
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T4 | 1086-1093 | DiseaseOrPhenotypicFeature | denotes | viremia | D014766 | |
| T3 | 668-680 | DiseaseOrPhenotypicFeature | denotes | co-infection | D060085 | |
| T1 | 97-108 | DiseaseOrPhenotypicFeature | denotes | hepatitis B | D006509 | |
| T19 | 1590-1593 | OrganismTaxon | denotes | HBV | ||
| T18 | 1179-1187 | OrganismTaxon | denotes | patients | ||
| T17 | 1163-1171 | OrganismTaxon | denotes | patients | ||
| T16 | 1072-1080 | OrganismTaxon | denotes | patients | ||
| T15 | 879-887 | OrganismTaxon | denotes | patients | ||
| T14 | 840-848 | OrganismTaxon | denotes | patients | ||
| T13 | 744-752 | OrganismTaxon | denotes | patients | ||
| T12 | 718-721 | OrganismTaxon | denotes | HBV | ||
| T11 | 654-662 | OrganismTaxon | denotes | patients | ||
| T10 | 509-512 | OrganismTaxon | denotes | HBV | ||
| T9 | 433-436 | OrganismTaxon | denotes | HBV | ||
| T8 | 368-376 | OrganismTaxon | denotes | Patients | ||
| T7 | 349-352 | OrganismTaxon | denotes | HIV | ||
| T6 | 335-343 | OrganismTaxon | denotes | patients | ||
| T5 | 279-302 | OrganismTaxon | denotes | hepatitis B virus (HBV) | ||
| T4926 | 271-274 | OrganismTaxon | denotes | HIV | ||
| T96270 | 245-253 | OrganismTaxon | denotes | patients | ||
| T94231 | 89-92 | OrganismTaxon | denotes | HIV | ||
| T84556 | 63-71 | OrganismTaxon | denotes | patients | ||
| T77588 | 1296-1304 | GeneOrGeneProduct | denotes | envelope | ||
| T33 | 1740-1743 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T32 | 1682-1685 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T31 | 1644-1651 | ChemicalEntity | denotes | vaccine | D014612 | |
| T28 | 1520-1523 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T27 | 1446-1449 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T24 | 987-990 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T23 | 954-957 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T20 | 946-949 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T21807 | 915-918 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T78797 | 906-909 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T30923 | 867-870 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T51554 | 404-409 | ChemicalEntity | denotes | HBsAg | ChemicalEntity|D006514 | |
| T36773 | 205-208 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T54841 | 194-203 | ChemicalEntity | denotes | tenofovir | http://purl.obolibrary.org/obo/CHEBI_134504|http://purl.obolibrary.org/obo/CHEBI_63625|http://purl.obolibrary.org/obo/CHEBI_63716|D000068698 | |
| T54654 | 185-188 | ChemicalEntity | denotes | LAM | http://purl.obolibrary.org/obo/CHEBI_63577|http://purl.obolibrary.org/obo/CHEBI_59524|C050016 | |
| T22494 | 173-183 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T58543 | 18-28 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T80885 | 1409-1415 | SequenceVariant | denotes | G1899A | ||
| T3620 | 1401-1407 | SequenceVariant | denotes | G1896A | ||
| T26696 | 1366-1372 | SequenceVariant | denotes | G1764A | ||
| T89313 | 1358-1364 | SequenceVariant | denotes | A1762T |
Test-merged-2
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T89313 | 1358-1364 | SequenceVariant | denotes | A1762T | ||
| T26696 | 1366-1372 | SequenceVariant | denotes | G1764A | ||
| T3620 | 1401-1407 | SequenceVariant | denotes | G1896A | ||
| T80885 | 1409-1415 | SequenceVariant | denotes | G1899A | ||
| T58543 | 18-28 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T22494 | 173-183 | ChemicalEntity | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T54654 | 185-188 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T54841 | 194-203 | ChemicalEntity | denotes | tenofovir | D000068698|http://purl.obolibrary.org/obo/CHEBI_63716|http://purl.obolibrary.org/obo/CHEBI_63625|http://purl.obolibrary.org/obo/CHEBI_134504 | |
| T36773 | 205-208 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T51554 | 404-409 | ChemicalEntity | denotes | HBsAg | D006514|ChemicalEntity | |
| T30923 | 867-870 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T78797 | 906-909 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T21807 | 915-918 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T20 | 946-949 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T23 | 954-957 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T24 | 987-990 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T27 | 1446-1449 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T28 | 1520-1523 | ChemicalEntity | denotes | LAM | C050016|http://purl.obolibrary.org/obo/CHEBI_59524|http://purl.obolibrary.org/obo/CHEBI_63577 | |
| T31 | 1644-1651 | ChemicalEntity | denotes | vaccine | D014612 | |
| T32 | 1682-1685 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T33 | 1740-1743 | ChemicalEntity | denotes | TDF | http://purl.obolibrary.org/obo/CHEBI_63718 | |
| T77588 | 1296-1304 | GeneOrGeneProduct | denotes | envelope | ||
| T84556 | 63-71 | OrganismTaxon | denotes | patients | ||
| T94231 | 89-92 | OrganismTaxon | denotes | HIV | ||
| T96270 | 245-253 | OrganismTaxon | denotes | patients | ||
| T4926 | 271-274 | OrganismTaxon | denotes | HIV | ||
| T5 | 279-302 | OrganismTaxon | denotes | hepatitis B virus (HBV) | ||
| T6 | 335-343 | OrganismTaxon | denotes | patients | ||
| T7 | 349-352 | OrganismTaxon | denotes | HIV | ||
| T8 | 368-376 | OrganismTaxon | denotes | Patients | ||
| T9 | 433-436 | OrganismTaxon | denotes | HBV | ||
| T10 | 509-512 | OrganismTaxon | denotes | HBV | ||
| T11 | 654-662 | OrganismTaxon | denotes | patients | ||
| T12 | 718-721 | OrganismTaxon | denotes | HBV | ||
| T13 | 744-752 | OrganismTaxon | denotes | patients | ||
| T14 | 840-848 | OrganismTaxon | denotes | patients | ||
| T15 | 879-887 | OrganismTaxon | denotes | patients | ||
| T16 | 1072-1080 | OrganismTaxon | denotes | patients | ||
| T17 | 1163-1171 | OrganismTaxon | denotes | patients | ||
| T18 | 1179-1187 | OrganismTaxon | denotes | patients | ||
| T19 | 1590-1593 | OrganismTaxon | denotes | HBV | ||
| T1 | 97-108 | DiseaseOrPhenotypicFeature | denotes | hepatitis B | D006509 | |
| T2 | 279-290 | DiseaseOrPhenotypicFeature | denotes | hepatitis B | D006509 | |
| T3 | 668-680 | DiseaseOrPhenotypicFeature | denotes | co-infection | D060085 | |
| T4 | 1086-1093 | DiseaseOrPhenotypicFeature | denotes | viremia | D014766 |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_20648600_1_0 | 173-183 | expanded | denotes | lamivudine |
| SS2_20648600_1_0 | 185-188 | abbr | denotes | LAM |
| SS1_20648600_1_1 | 279-296 | expanded | denotes | hepatitis B virus |
| SS2_20648600_1_1 | 298-301 | abbr | denotes | HBV |
| SS1_20648600_5_0 | 559-578 | expanded | denotes | basal core promoter |
| SS2_20648600_5_0 | 580-583 | abbr | denotes | BCP |
| AE1_20648600_1_0 | SS1_20648600_1_0 | SS2_20648600_1_0 | abbreviatedTo | lamivudine,LAM |
| AE1_20648600_1_1 | SS1_20648600_1_1 | SS2_20648600_1_1 | abbreviatedTo | hepatitis B virus,HBV |
| AE1_20648600_5_0 | SS1_20648600_5_0 | SS2_20648600_5_0 | abbreviatedTo | basal core promoter,BCP |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1019-1024 | ProteinMutation:p|SUB|L|180|M | denotes | L180M |
| T2 | 1029-1034 | ProteinMutation:p|SUB|M|204|V | denotes | M204V |
| T3 | 1130-1135 | ProteinMutation:p|SUB|V|173|L | denotes | V173L |
| T4 | 1239-1244 | ProteinMutation:p|SUB|V|173|L | denotes | V173L |
| T5 | 1249-1254 | ProteinMutation:p|SUB|L|180|M | denotes | L180M |
| T6 | 1259-1264 | ProteinMutation:p|SUB|M|204|V | denotes | M204V |
| T7 | 1312-1317 | ProteinMutation:p|SUB|E|164|D | denotes | E164D |
| T8 | 1321-1326 | ProteinMutation:p|SUB|I|195|M | denotes | I195M |
| T9 | 1358-1364 | DNAMutation:g|SUB|A|1762|T | denotes | A1762T |
| T10 | 1366-1372 | DNAMutation:g|SUB|G|1764|A | denotes | G1764A |
| T11 | 1401-1407 | DNAMutation:g|SUB|G|1896|A | denotes | G1896A |
| T12 | 1409-1415 | DNAMutation:g|SUB|G|1899|A | denotes | G1899A |