PubMed:20139283 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/20139283","sourcedb":"PubMed","sourceid":"20139283","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/20139283","text":"Scardovia wiggsiae sp. nov., isolated from the human oral cavity and clinical material, and emended descriptions of the genus Scardovia and Scardovia inopinata.\nSix strains of anaerobic, pleomorphic Gram-positive bacilli, isolated from the human oral cavity and an infected arm wound, were subjected to a comprehensive range of phenotypic and genotypic tests and were found to comprise a homogeneous group. 16S rRNA gene sequence analysis revealed that the isolates were most closely related to Scardovia inopinata CCUG 35729(T) (94.8-94.9 % 16S rRNA gene sequence similarity). The isolates were saccharolytic and produced acetic and lactic acids as end products of fermentation. The major fatty acids were C(16 : 0) (49.8 %) and C(18 : 1)ω9c (35.8 %). Polar lipid analysis revealed a variety of glycolipids, diphosphatidylglycerol, an unidentified phospholipid and an unidentified phosphoglycolipid. No respiratory quinones were detected. The peptidoglycan was of the type A4α L-Lys-Thr-Glu, with L-lysine partially replaced by L-ornithine. The DNA G+C content of one of the strains, C1A_55(T)(,) was 55 mol%. A novel species, Scardovia wiggsiae sp. nov., is proposed to accommodate the six isolates, with the type strain C1A_55(T) (=DSM 22547(T)=CCUG 58090(T)).","tracks":[{"project":"SPECIES800","denotations":[{"id":"T1","span":{"begin":0,"end":18},"obj":"230143"},{"id":"T2","span":{"begin":47,"end":52},"obj":"9606"},{"id":"T3","span":{"begin":140,"end":159},"obj":"78259"},{"id":"T4","span":{"begin":240,"end":245},"obj":"9606"},{"id":"T5","span":{"begin":495,"end":514},"obj":"78259"},{"id":"T6","span":{"begin":1128,"end":1146},"obj":"230143"}],"namespaces":[{"prefix":"_base","uri":"http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info\u0026id="}],"attributes":[{"subj":"T1","pred":"source","obj":"SPECIES800"},{"subj":"T2","pred":"source","obj":"SPECIES800"},{"subj":"T3","pred":"source","obj":"SPECIES800"},{"subj":"T4","pred":"source","obj":"SPECIES800"},{"subj":"T5","pred":"source","obj":"SPECIES800"},{"subj":"T6","pred":"source","obj":"SPECIES800"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"SPECIES800","color":"#ecd293","default":true}]}]}}