> top > docs > PubMed:20038961 > annotations

PubMed:20038961 JSONTXT

Annnotations TAB JSON ListView MergeView

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_1 318-324 funRiceGene:183 denotes floral
M_0 663-668 PO:0009038, funRiceGene:257 denotes palea
M_2 420-426 funRiceGene:183 denotes floral
M_3 754-760 funRiceGene:183 denotes floral
M_4 905-911 funRiceGene:183 denotes floral
M_5 1093-1099 funRiceGene:183 denotes floral
M_6 1223-1229 funRiceGene:183 denotes floral
M_7 548-558 PO:0020021 denotes integument
M_8 335-343 funRiceGene:300 denotes meristem
M_9 427-435 funRiceGene:300 denotes meristem
M_10 761-769 funRiceGene:300 denotes meristem
M_11 1240-1248 funRiceGene:300 denotes meristem
M_12 730-741 WTO:0000011, funRiceGene:359 denotes development
M_13 723-729 PO:0009030 denotes carpel
M_14 420-435 funRiceGene:508, xzyao:7131 denotes floral meristem
M_15 754-769 funRiceGene:508, xzyao:7131 denotes floral meristem
M_16 318-330 PO:0025395, funRiceGene:293, xzyao:10281 denotes floral organ
M_17 1223-1235 PO:0025395, funRiceGene:293, xzyao:10281 denotes floral organ
M_18 905-918 xzyao:2270 denotes floral organs
M_19 364-376 hunflair:NA:Species denotes Oryza sativa
M_20 809-818 hunflair:NA:Gene denotes SEPALLATA
M_21 4-13 hunflair:NA:Gene denotes AGL6-like
M_22 279-288 hunflair:NA:Gene denotes AGL6-like
M_23 77-81 hunflair:NA:Species denotes rice
M_24 358-362 hunflair:NA:Species denotes rice
M_25 1276-1280 hunflair:NA:Species denotes rice
M_26 979-988 hunflair:NA:Gene denotes osmads1-z
M_27 1025-1034 hunflair:NA:Gene denotes osmads1-z
M_28 92-105 hunflair:NA:Gene denotes AGAMOUS-LIKE6
M_29 836-843 hunflair:NA:Gene denotes OsMADS1
M_30 1295-1302 hunflair:NA:Gene denotes OsMADS1
M_31 845-849 hunflair:NA:Gene denotes LHS1
M_32 19-26 hunflair:NA:Gene denotes OsMADS6
M_33 295-302 hunflair:NA:Gene denotes OsMADS6
M_34 382-389 hunflair:NA:Gene denotes OsMADS6
M_35 467-474 hunflair:NA:Gene denotes OsMADS6
M_36 1161-1168 hunflair:NA:Gene denotes OsMADS6
M_37 989-998 hunflair:NA:Gene denotes osmads6-1
M_38 1035-1044 hunflair:NA:Gene denotes osmads6-1
M_39 820-823 hunflair:NA:Gene denotes SEP
M_40 4-8 hunflair:NA:Gene denotes AGL6
M_41 107-111 hunflair:NA:Gene denotes AGL6
M_42 279-283 hunflair:NA:Gene denotes AGL6
M_43 629-636 hunflair:NA:Gene denotes osmads6
M_44 875-882 hunflair:NA:Gene denotes osmads6
M_45 989-996 hunflair:NA:Gene denotes osmads6
M_46 1035-1042 hunflair:NA:Gene denotes osmads6
M_47 364-378 pubtator:4530:Species denotes Oryza sativa L
M_48 77-81 pubtator:4530:Species denotes rice
M_49 358-362 pubtator:4530:Species denotes rice
M_50 1276-1280 pubtator:4530:Species denotes rice
M_51 183-194 pubtator:3398:Species denotes angiosperms

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 1223-1259 cand:TO:0006019-floral organ identity denotes floral organ and meristem identities
M_1 1223-1259 cand:PO:0007601-floral organ meristem development stage denotes floral organ and meristem identities
M_2 1223-1259 cand:funRiceGene:175-floral organ denotes floral organ and meristem identities
M_3 1223-1259 cand:PO:0025477-floral organ primordium denotes floral organ and meristem identities
M_4 1223-1259 cand:funRiceGene:1-floral organ number denotes floral organ and meristem identities
M_5 1223-1259 cand:TO:0002614-floral organ length denotes floral organ and meristem identities
M_6 1223-1259 cand:PO:0007600-floral organ differentiation stage denotes floral organ and meristem identities
M_7 1223-1259 cand:funRiceGene:385-floral organ number control denotes floral organ and meristem identities
M_8 1223-1259 cand:TO:0006022-floral organ development trait denotes floral organ and meristem identities
M_9 1070-1109 cand:funRiceGene:312-floral meristem denotes severely indeterminate floral meristems
M_10 1070-1109 cand:funRiceGene:133-floral meristem determinacy denotes severely indeterminate floral meristems
M_11 1070-1109 cand:PO:0000229-flower meristem denotes severely indeterminate floral meristems
M_12 1070-1109 cand:PO:0009105-inflorescence axillary meristem denotes severely indeterminate floral meristems
M_13 1070-1109 cand:PO:0009108-inflorescence apical meristem denotes severely indeterminate floral meristems
M_14 1070-1109 cand:TO:0002638-shoot meristem development denotes severely indeterminate floral meristems
M_15 1070-1109 cand:PO:0008016-vegetative shoot apical meristem denotes severely indeterminate floral meristems
M_16 1070-1109 cand:PO:0006346-leaf intercalary meristem denotes severely indeterminate floral meristems
M_17 1070-1109 cand:PO:0006020-lateral root apical meristem denotes severely indeterminate floral meristems
M_18 1070-1109 cand:funRiceGene:3-intercalary meristem denotes severely indeterminate floral meristems
M_19 1070-1109 cand:PO:0006347-stem intercalary meristem denotes severely indeterminate floral meristems
M_20 655-677 cand:PO:0006033-palea apiculus denotes altered palea identity
M_21 655-677 cand:TO:0000209-palea number denotes altered palea identity
M_22 655-677 cand:PO:0025350-palea awn denotes altered palea identity
M_23 655-677 cand:PO:0001071-fully expanded palea stage denotes altered palea identity
M_24 655-677 cand:TO:0006017-meristem identity denotes altered palea identity
M_25 655-677 cand:TO:0006030-spikelet meristem identity denotes altered palea identity
M_26 655-677 cand:WTO:0000117-water quantity denotes altered palea identity
M_27 655-677 cand:TO:0006019-floral organ identity denotes altered palea identity
M_28 655-677 cand:funRiceGene:84-organ identity denotes altered palea identity
M_29 655-677 cand:funRiceGene:388-ovule identity denotes altered palea identity
M_30 629-644 cand:PO:0025312-megasporangium exothecium denotes osmads6 mutants
M_31 629-644 cand:PO:0025311-microsporangium exothecium denotes osmads6 mutants
M_32 629-644 cand:PO:0025418-sclerid cell denotes osmads6 mutants
M_33 629-644 cand:PO:0025027-microgametophytic cell denotes osmads6 mutants
M_34 629-644 cand:PO:0030059-tmema cell denotes osmads6 mutants
M_35 629-644 cand:PO:0004007-phelloid cell denotes osmads6 mutants
M_36 629-644 cand:TO:0000690-maysin content denotes osmads6 mutants
M_37 629-644 cand:funRiceGene:54-small leaves denotes osmads6 mutants
M_38 629-644 cand:WTO:0000389-Common Bunt denotes osmads6 mutants
M_39 629-644 cand:funRiceGene:97-osmotic stress denotes osmads6 mutants
M_40 629-644 cand:TO:0000164-stress trait denotes osmads6 mutants
M_41 1193-1206 cand:PO:0025312-megasporangium exothecium denotes "floral state
M_42 1193-1206 cand:PECO:0007124-pest/pathogen/animal/plant environment denotes "floral state
M_43 1193-1206 cand:PECO:0007324-Hirschmaniella imamuri exposure denotes "floral state
M_44 1193-1206 cand:PECO:0007321-Hirschmaniella spinicaudata exposure denotes "floral state
M_45 1193-1206 cand:TO:0000859-flower shape denotes "floral state
M_46 1193-1206 cand:PO:0001029-E tetrad stage denotes "floral state
M_47 1193-1206 cand:PPO:0001025-floral structure denotes "floral state
M_48 1193-1206 cand:WTO:0000459-flag smut denotes "floral state
M_49 1193-1206 cand:funRiceGene:415-floral organ denotes "floral state
M_50 714-741 cand:PO:0007619-ovule development stage denotes abnormal carpel development
M_51 714-741 cand:PO:0001004-anther development stage denotes abnormal carpel development
M_52 714-741 cand:funRiceGene:85-carpel differentiation denotes abnormal carpel development
M_53 714-741 cand:PO:0007618-carpel primordium visible stage denotes abnormal carpel development
M_54 714-741 cand:TO:0006013-carpel number denotes abnormal carpel development
M_55 714-741 cand:PO:0005019-carpel vascular system denotes abnormal carpel development
M_56 714-741 cand:funRiceGene:420-vascular development denotes abnormal carpel development
M_57 714-741 cand:funRiceGene:261-stomatal development denotes abnormal carpel development
M_58 714-741 cand:funRiceGene:60-crown root development denotes abnormal carpel development
M_59 714-741 cand:funRiceGene:366-reproductive development denotes abnormal carpel development
M_60 714-741 cand:funRiceGene:200-chloroplast development denotes abnormal carpel development
M_61 4-18 cand:funRiceGene:336-homeobox gene denotes AGL6-like gene
M_62 4-18 cand:funRiceGene:333-transcription suppressor denotes AGL6-like gene
M_63 4-18 cand:TO:0000857-lodicule type denotes AGL6-like gene
M_64 4-18 cand:TO:0006023-lodicule development trait denotes AGL6-like gene
M_65 4-18 cand:TO:0002612-vegetative homeotic development trait denotes AGL6-like gene
M_66 4-18 cand:TO:0002611-homeotic development trait denotes AGL6-like gene
M_67 4-18 cand:funRiceGene:263-albumin denotes AGL6-like gene
M_68 4-18 cand:PO:0025351-glume awn denotes AGL6-like gene
M_69 4-18 cand:funRiceGene:182-alkaline stress denotes AGL6-like gene
M_70 4-18 cand:PO:0000013-cauline leaf denotes AGL6-like gene
M_71 1295-1302 GeneID:RAPID:Os03g0215400MSUID:LOC_Os03g11614GraID:GR:0060502 denotes OsMADS1
M_72 1025-1034 GeneID:RAPID:Os03g0215400MSUID:LOC_Os03g11614GraID:GR:0060502 denotes osmads1-z
M_73 1161-1168 GeneID:RAPID:Os02g0682200MSUID:LOC_Os02g45770 denotes OsMADS6
M_74 629-636 GeneID:RAPID:Os02g0682200MSUID:LOC_Os02g45770 denotes osmads6
M_75 19-26 GeneID:RAPID:Os02g0682200MSUID:LOC_Os02g45770 denotes OsMADS6
T74468 1093-1109 xzyao:15133 denotes floral meristems
T7317 37-49 PO:0025395, funRiceGene:293, xzyao:33628 denotes floral organ
T26630 318-330 PO:0025395, funRiceGene:293, xzyao:33628 denotes floral organ
T41249 1223-1235 PO:0025395, funRiceGene:293, xzyao:33628 denotes floral organ
T25510 364-376 xzyao:1553 denotes Oryza sativa
T74474 699-712 xzyao:27007 denotes mosaic organs
T76272 730-741 WTO:0000011, funRiceGene:359 denotes development
T79327 714-741 xzyao:44216 denotes abnormal carpel development
T99324 899-918 xzyao:4161 denotes inner floral organs
T31488 922-943 xzyao:3990 denotes glume-like structures
T51313 723-729 PO:0009030 denotes carpel
T52345 663-677 xzyao:18215 denotes palea identity
T77361 54-62 funRiceGene:300 denotes meristem
T48022 335-343 funRiceGene:300 denotes meristem
T98312 427-435 funRiceGene:300 denotes meristem
T25268 761-769 funRiceGene:300 denotes meristem
T93565 1240-1248 funRiceGene:300 denotes meristem
T70891 611-627 xzyao:28643 denotes wild type plants
T73881 439-451 xzyao:21587 denotes early stages
T44667 655-677 xzyao:20009 denotes altered palea identity
T12127 754-781 funRiceGene:128, xzyao:28487 denotes floral meristem determinacy
T66455 685-690 PO:0009039 denotes glume
T65679 922-927 PO:0009039 denotes glume
T97506 679-690 xzyao:25703 denotes extra glume
T59010 37-43 funRiceGene:183 denotes floral
T83742 318-324 funRiceGene:183 denotes floral
T32211 420-426 funRiceGene:183 denotes floral
T43937 754-760 funRiceGene:183 denotes floral
T1881 905-911 funRiceGene:183 denotes floral
T13626 1093-1099 funRiceGene:183 denotes floral
T32762 1194-1200 funRiceGene:183 denotes floral
T35987 1223-1229 funRiceGene:183 denotes floral
T95798 761-781 xzyao:13112 denotes meristem determinacy
T13405 1070-1109 xzyao:39430 denotes severely indeterminate floral meristems
T11253 548-558 PO:0020021 denotes integument
T35307 587-597 PO:0009064 denotes receptacle
T97195 562-567 funRiceGene:234 denotes ovule
T17932 723-741 xzyao:3295 denotes carpel development
T76301 420-435 funRiceGene:508, xzyao:25765 denotes floral meristem
T84824 754-769 funRiceGene:508, xzyao:25765 denotes floral meristem
T64787 905-918 xzyao:33833 denotes floral organs
T42019 37-73 xzyao:32585 denotes floral organ and meristem identities
T84754 318-354 xzyao:32585 denotes floral organ and meristem identities
T78346 1223-1259 xzyao:32585 denotes floral organ and meristem identities
T94837 663-668 PO:0009038, funRiceGene:257 denotes palea
T71672 4-13 hunflair:NA:Gene denotes AGL6-like
T98840 279-288 hunflair:NA:Gene denotes AGL6-like
T92283 979-988 hunflair:NA:Gene denotes osmads1-z
T89899 1025-1034 hunflair:NA:Gene denotes osmads1-z
T99836 989-998 hunflair:NA:Gene denotes osmads6-1
T27538 1035-1044 hunflair:NA:Gene denotes osmads6-1
T25285 809-818 hunflair:NA:Gene denotes SEPALLATA
T50742 845-849 hunflair:NA:Gene denotes LHS1
T67517 92-105 hunflair:NA:Gene denotes AGAMOUS-LIKE6
T27509 4-8 hunflair:NA:Gene denotes AGL6
T2870 107-111 hunflair:NA:Gene denotes AGL6
T78200 279-283 hunflair:NA:Gene denotes AGL6
T43018 364-376 hunflair:NA:Species denotes Oryza sativa
T90911 836-843 hunflair:NA:Gene denotes OsMADS1
T20960 1295-1302 hunflair:NA:Gene denotes OsMADS1
T73493 77-81 hunflair:NA:Species denotes rice
T94904 358-362 hunflair:NA:Species denotes rice
T53528 1276-1280 hunflair:NA:Species denotes rice
T44132 629-636 hunflair:NA:Gene denotes osmads6
T58396 875-882 hunflair:NA:Gene denotes osmads6
T61286 989-996 hunflair:NA:Gene denotes osmads6
T59616 1035-1042 hunflair:NA:Gene denotes osmads6
T77345 19-26 hunflair:NA:Gene denotes OsMADS6
T55339 295-302 hunflair:NA:Gene denotes OsMADS6
T21848 382-389 hunflair:NA:Gene denotes OsMADS6
T11780 467-474 hunflair:NA:Gene denotes OsMADS6
T87637 1161-1168 hunflair:NA:Gene denotes OsMADS6
T96113 820-823 hunflair:NA:Gene denotes SEP
T70343 77-81 pubtator:4530:Species denotes rice
T85242 358-362 pubtator:4530:Species denotes rice
T65879 1276-1280 pubtator:4530:Species denotes rice
M_76 183-194 pubtator:3398:Species denotes angiosperms
M_77 364-378 pubtator:4530:Species denotes Oryza sativa L

Allie

Id Subject Object Predicate Lexical cue
SS1_20038961_1_0 92-105 expanded denotes AGAMOUS-LIKE6
SS2_20038961_1_0 107-111 abbr denotes AGL6
SS1_20038961_6_0 809-818 expanded denotes SEPALLATA
SS2_20038961_6_0 820-823 abbr denotes SEP
AE1_20038961_1_0 SS1_20038961_1_0 SS2_20038961_1_0 abbreviatedTo AGAMOUS-LIKE6,AGL6
AE1_20038961_6_0 SS1_20038961_6_0 SS2_20038961_6_0 abbreviatedTo SEPALLATA,SEP

funRiceGenes-all

Id Subject Object Predicate Lexical cue
PTO-all_T1 54-73 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities
PTO-all_T2 335-354 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities
PTO-all_T3 761-781 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem determinacy
PTO-all_T4 1240-1259 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities

funRiceGenes-exact

Id Subject Object Predicate Lexical cue
PTO-exact_T1 54-73 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities
PTO-exact_T2 335-354 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities
PTO-exact_T3 761-781 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem determinacy
PTO-exact_T4 1240-1259 http://purl.obolibrary.org/obo/TO_0006017 denotes meristem identities