PubMed:1945879 JSONTXT

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    PMID_GLOBAL

    {"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":431,"end":439},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0003659"},{"id":"A2","pred":"mondo_id","subj":"T1","obj":"0003660"},{"id":"A3","pred":"mondo_id","subj":"T1","obj":"0005062"}],"text":"One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter.\nThe inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene."}

    jnlpba-st-training

    {"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":67,"end":97},"obj":"DNA"},{"id":"T2","span":{"begin":107,"end":129},"obj":"DNA"},{"id":"T3","span":{"begin":146,"end":171},"obj":"DNA"},{"id":"T4","span":{"begin":175,"end":218},"obj":"DNA"},{"id":"T5","span":{"begin":231,"end":247},"obj":"DNA"},{"id":"T6","span":{"begin":266,"end":301},"obj":"DNA"},{"id":"T7","span":{"begin":349,"end":353},"obj":"DNA"},{"id":"T8","span":{"begin":355,"end":376},"obj":"DNA"},{"id":"T9","span":{"begin":399,"end":421},"obj":"DNA"},{"id":"T10","span":{"begin":425,"end":445},"obj":"cell_line"},{"id":"T11","span":{"begin":458,"end":468},"obj":"cell_line"},{"id":"T12","span":{"begin":494,"end":518},"obj":"cell_line"},{"id":"T13","span":{"begin":536,"end":551},"obj":"protein"},{"id":"T14","span":{"begin":560,"end":568},"obj":"DNA"},{"id":"T15","span":{"begin":618,"end":623},"obj":"protein"},{"id":"T16","span":{"begin":625,"end":640},"obj":"protein"},{"id":"T17","span":{"begin":699,"end":704},"obj":"protein"},{"id":"T18","span":{"begin":799,"end":816},"obj":"protein"},{"id":"T19","span":{"begin":820,"end":825},"obj":"protein"},{"id":"T20","span":{"begin":827,"end":841},"obj":"protein"},{"id":"T21","span":{"begin":870,"end":874},"obj":"DNA"},{"id":"T22","span":{"begin":880,"end":885},"obj":"protein"},{"id":"T23","span":{"begin":906,"end":911},"obj":"protein"},{"id":"T24","span":{"begin":915,"end":919},"obj":"DNA"},{"id":"T25","span":{"begin":947,"end":951},"obj":"DNA"},{"id":"T26","span":{"begin":957,"end":985},"obj":"DNA"},{"id":"T27","span":{"begin":1016,"end":1021},"obj":"protein"},{"id":"T28","span":{"begin":1025,"end":1033},"obj":"DNA"},{"id":"T29","span":{"begin":1091,"end":1114},"obj":"DNA"},{"id":"T30","span":{"begin":1118,"end":1128},"obj":"cell_line"},{"id":"T31","span":{"begin":1199,"end":1216},"obj":"DNA"},{"id":"T32","span":{"begin":1295,"end":1304},"obj":"cell_line"},{"id":"T33","span":{"begin":1309,"end":1319},"obj":"cell_line"},{"id":"T34","span":{"begin":1392,"end":1396},"obj":"DNA"},{"id":"T35","span":{"begin":1465,"end":1474},"obj":"DNA"}],"text":"One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter.\nThe inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene."}

    pubmed-sentences-benchmark

    {"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":130},"obj":"Sentence"},{"id":"S2","span":{"begin":131,"end":302},"obj":"Sentence"},{"id":"S3","span":{"begin":303,"end":469},"obj":"Sentence"},{"id":"S4","span":{"begin":470,"end":569},"obj":"Sentence"},{"id":"S5","span":{"begin":570,"end":698},"obj":"Sentence"},{"id":"S6","span":{"begin":699,"end":826},"obj":"Sentence"},{"id":"S7","span":{"begin":827,"end":924},"obj":"Sentence"},{"id":"S8","span":{"begin":925,"end":1129},"obj":"Sentence"},{"id":"S9","span":{"begin":1130,"end":1320},"obj":"Sentence"},{"id":"S10","span":{"begin":1321,"end":1475},"obj":"Sentence"}],"text":"One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter.\nThe inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene."}

    genia-medco-coref

    {"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":31,"end":61},"obj":"NP"},{"id":"C2","span":{"begin":175,"end":218},"obj":"NP"},{"id":"C3","span":{"begin":227,"end":259},"obj":"NP"},{"id":"C4","span":{"begin":349,"end":377},"obj":"NP"},{"id":"C5","span":{"begin":425,"end":445},"obj":"NP"},{"id":"C6","span":{"begin":458,"end":468},"obj":"NP"},{"id":"C7","span":{"begin":494,"end":498},"obj":"NP"},{"id":"C8","span":{"begin":509,"end":518},"obj":"NP"},{"id":"C10","span":{"begin":560,"end":564},"obj":"NP"},{"id":"C9","span":{"begin":560,"end":568},"obj":"NP"},{"id":"C11","span":{"begin":585,"end":610},"obj":"NP"},{"id":"C12","span":{"begin":618,"end":641},"obj":"NP"},{"id":"C13","span":{"begin":693,"end":697},"obj":"NP"},{"id":"C14","span":{"begin":699,"end":704},"obj":"NP"},{"id":"C15","span":{"begin":717,"end":759},"obj":"NP"},{"id":"C16","span":{"begin":761,"end":771},"obj":"NP"},{"id":"C17","span":{"begin":820,"end":825},"obj":"NP"},{"id":"C18","span":{"begin":827,"end":841},"obj":"NP"},{"id":"C19","span":{"begin":866,"end":874},"obj":"NP"},{"id":"C20","span":{"begin":880,"end":885},"obj":"NP"},{"id":"C21","span":{"begin":906,"end":911},"obj":"NP"},{"id":"C23","span":{"begin":915,"end":919},"obj":"NP"},{"id":"C22","span":{"begin":915,"end":923},"obj":"NP"},{"id":"C24","span":{"begin":943,"end":951},"obj":"NP"},{"id":"C25","span":{"begin":1016,"end":1021},"obj":"NP"},{"id":"C27","span":{"begin":1025,"end":1029},"obj":"NP"},{"id":"C26","span":{"begin":1025,"end":1033},"obj":"NP"},{"id":"C28","span":{"begin":1118,"end":1128},"obj":"NP"},{"id":"C29","span":{"begin":1195,"end":1216},"obj":"NP"},{"id":"C30","span":{"begin":1227,"end":1230},"obj":"NP"},{"id":"C31","span":{"begin":1231,"end":1257},"obj":"NP"},{"id":"C32","span":{"begin":1271,"end":1274},"obj":"NP"},{"id":"C33","span":{"begin":1295,"end":1304},"obj":"NP"},{"id":"C34","span":{"begin":1309,"end":1319},"obj":"NP"},{"id":"C35","span":{"begin":1388,"end":1396},"obj":"NP"},{"id":"C36","span":{"begin":1461,"end":1474},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-ident","subj":"C7","obj":"C2"},{"id":"R2","pred":"coref-ident","subj":"C8","obj":"C5"},{"id":"R3","pred":"coref-ident","subj":"C10","obj":"C4"},{"id":"R4","pred":"coref-appos","subj":"C11","obj":"C12"},{"id":"R5","pred":"coref-ident","subj":"C13","obj":"C10"},{"id":"R6","pred":"coref-ident","subj":"C14","obj":"C12"},{"id":"R7","pred":"coref-other","subj":"C16","obj":"C15"},{"id":"R8","pred":"coref-other","subj":"C18","obj":"C17"},{"id":"R9","pred":"coref-ident","subj":"C19","obj":"C13"},{"id":"R10","pred":"coref-ident","subj":"C20","obj":"C14"},{"id":"R11","pred":"coref-ident","subj":"C21","obj":"C17"},{"id":"R12","pred":"coref-ident","subj":"C23","obj":"C19"},{"id":"R13","pred":"coref-ident","subj":"C22","obj":"C9"},{"id":"R14","pred":"coref-ident","subj":"C24","obj":"C23"},{"id":"R15","pred":"coref-ident","subj":"C25","obj":"C21"},{"id":"R16","pred":"coref-ident","subj":"C27","obj":"C24"},{"id":"R17","pred":"coref-ident","subj":"C26","obj":"C22"},{"id":"R18","pred":"coref-ident","subj":"C28","obj":"C6"},{"id":"R19","pred":"coref-ident","subj":"C29","obj":"C3"},{"id":"R20","pred":"coref-pron","subj":"C30","obj":"C29"},{"id":"R21","pred":"coref-ident","subj":"C31","obj":"C1"},{"id":"R22","pred":"coref-pron","subj":"C32","obj":"C29"},{"id":"R23","pred":"coref-ident","subj":"C33","obj":"C8"},{"id":"R24","pred":"coref-ident","subj":"C34","obj":"C28"},{"id":"R25","pred":"coref-ident","subj":"C35","obj":"C27"},{"id":"R26","pred":"coref-ident","subj":"C36","obj":"C7"}],"text":"One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter.\nThe inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene."}

    GENIAcorpus

    {"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":35,"end":61},"obj":"other_name"},{"id":"T2","span":{"begin":67,"end":97},"obj":"DNA_domain_or_region"},{"id":"T3","span":{"begin":107,"end":129},"obj":"DNA_domain_or_region"},{"id":"T4","span":{"begin":146,"end":171},"obj":"DNA_domain_or_region"},{"id":"T5","span":{"begin":175,"end":207},"obj":"DNA_domain_or_region"},{"id":"T6","span":{"begin":207,"end":211},"obj":"protein_molecule"},{"id":"T7","span":{"begin":231,"end":247},"obj":"DNA_domain_or_region"},{"id":"T8","span":{"begin":248,"end":259},"obj":"polynucleotide"},{"id":"T9","span":{"begin":266,"end":301},"obj":"DNA_domain_or_region"},{"id":"T10","span":{"begin":349,"end":353},"obj":"DNA_domain_or_region"},{"id":"T11","span":{"begin":355,"end":376},"obj":"DNA_domain_or_region"},{"id":"T12","span":{"begin":399,"end":421},"obj":"DNA_domain_or_region"},{"id":"T13","span":{"begin":425,"end":445},"obj":"cell_line"},{"id":"T14","span":{"begin":458,"end":468},"obj":"cell_line"},{"id":"T15","span":{"begin":494,"end":498},"obj":"protein_molecule"},{"id":"T16","span":{"begin":536,"end":551},"obj":"protein_family_or_group"},{"id":"T17","span":{"begin":560,"end":568},"obj":"DNA_domain_or_region"},{"id":"T18","span":{"begin":618,"end":623},"obj":"protein_molecule"},{"id":"T19","span":{"begin":625,"end":640},"obj":"protein_molecule"},{"id":"T20","span":{"begin":666,"end":689},"obj":"other_name"},{"id":"T21","span":{"begin":693,"end":697},"obj":"DNA_substructure"},{"id":"T22","span":{"begin":699,"end":704},"obj":"protein_molecule"},{"id":"T23","span":{"begin":721,"end":733},"obj":"peptide"},{"id":"T24","span":{"begin":743,"end":748},"obj":"peptide"},{"id":"T25","span":{"begin":753,"end":759},"obj":"peptide"},{"id":"T26","span":{"begin":799,"end":816},"obj":"protein_subunit"},{"id":"T27","span":{"begin":820,"end":825},"obj":"protein_subunit"},{"id":"T28","span":{"begin":827,"end":841},"obj":"protein_molecule"},{"id":"T29","span":{"begin":870,"end":874},"obj":"DNA_domain_or_region"},{"id":"T30","span":{"begin":880,"end":885},"obj":"protein_molecule"},{"id":"T31","span":{"begin":906,"end":911},"obj":"protein_molecule"},{"id":"T32","span":{"begin":915,"end":919},"obj":"DNA_domain_or_region"},{"id":"T33","span":{"begin":947,"end":951},"obj":"DNA_domain_or_region"},{"id":"T34","span":{"begin":957,"end":966},"obj":"DNA_domain_or_region"},{"id":"T35","span":{"begin":967,"end":972},"obj":"protein_molecule"},{"id":"T36","span":{"begin":1016,"end":1021},"obj":"protein_molecule"},{"id":"T37","span":{"begin":1025,"end":1029},"obj":"DNA_domain_or_region"},{"id":"T38","span":{"begin":1091,"end":1102},"obj":"DNA_domain_or_region"},{"id":"T39","span":{"begin":1103,"end":1107},"obj":"DNA_domain_or_region"},{"id":"T40","span":{"begin":1118,"end":1128},"obj":"cell_line"},{"id":"T41","span":{"begin":1140,"end":1152},"obj":"other_name"},{"id":"T42","span":{"begin":1199,"end":1216},"obj":"DNA_domain_or_region"},{"id":"T43","span":{"begin":1231,"end":1257},"obj":"other_name"},{"id":"T44","span":{"begin":1295,"end":1304},"obj":"cell_line"},{"id":"T45","span":{"begin":1309,"end":1319},"obj":"cell_line"},{"id":"T46","span":{"begin":1392,"end":1396},"obj":"DNA_domain_or_region"},{"id":"T47","span":{"begin":1428,"end":1457},"obj":"other_name"},{"id":"T48","span":{"begin":1465,"end":1469},"obj":"protein_molecule"}],"text":"One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter.\nThe inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene."}