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PubMed:19365571 / 1195-1369 JSON TXT

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LitCoin-sentences

Id	Subject	Object	Predicate	Lexical cue
T13	0-174	Sentence	denotes	The two transversions resulted in the substitution of a stop codon for glutamine at codon 298 (p.Q298X) and a missense mutation at codon 358, tyrosine to histidine (p.Y358H).

LitCoin-entities-OrganismTaxon-PD

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	61-66	OrganismTaxon	denotes	codon	NCBItxid:79338
T2	84-89	OrganismTaxon	denotes	codon	NCBItxid:79338
T3	131-136	OrganismTaxon	denotes	codon	NCBItxid:79338

LitCoin-entities

Id	Subject	Object	Predicate	Lexical cue	db_id
5980	56-93	SequenceVariant	denotes	stop codon for glutamine at codon 298	p\|SUB\|Q\|298\|X
5981	95-102	SequenceVariant	denotes	p.Q298X	p\|SUB\|Q\|298\|X
5982	131-163	SequenceVariant	denotes	codon 358, tyrosine to histidine	p\|SUB\|Y\|358\|H
5983	165-172	SequenceVariant	denotes	p.Y358H	p\|SUB\|Y\|358\|H

LitCoin-SeqVar

Id	Subject	Object	Predicate	Lexical cue
T3	95-102	SequenceVariant	denotes	p.Q298X
T4	165-172	SequenceVariant	denotes	p.Y358H

LitCoin-GeneOrGeneProduct-v0

Id	Subject	Object	Predicate	Lexical cue
T27	56-60	GeneOrGeneProduct	denotes	stop
T28	71-80	GeneOrGeneProduct	denotes	glutamine
T29	110-118	GeneOrGeneProduct	denotes	missense
T30	119-127	GeneOrGeneProduct	denotes	mutation
T31	142-150	GeneOrGeneProduct	denotes	tyrosine

LitCoin-GeneOrGeneProduct-v2

Id	Subject	Object	Predicate	Lexical cue
T18	56-60	GeneOrGeneProduct	denotes	stop
T19	71-80	GeneOrGeneProduct	denotes	glutamine
T20	142-150	GeneOrGeneProduct	denotes	tyrosine

LitCoin-Chemical-MeSH-CHEBI

Id	Subject	Object	Predicate	Lexical cue	ID:
T4	71-80	ChemicalEntity	denotes	glutamine	http://purl.obolibrary.org/obo/CHEBI_28300
T5	142-150	ChemicalEntity	denotes	tyrosine	http://purl.obolibrary.org/obo/CHEBI_18186
T6	154-163	ChemicalEntity	denotes	histidine	http://purl.obolibrary.org/obo/CHEBI_27570

LitCoin-training-merged

Id	Subject	Object	Predicate	Lexical cue	ID:
T6	154-163	ChemicalEntity	denotes	histidine	http://purl.obolibrary.org/obo/CHEBI_27570
T5	142-150	ChemicalEntity	denotes	tyrosine	http://purl.obolibrary.org/obo/CHEBI_18186
T4	71-80	ChemicalEntity	denotes	glutamine	http://purl.obolibrary.org/obo/CHEBI_28300
T15391	165-172	SequenceVariant	denotes	p.Y358H
T35403	95-102	SequenceVariant	denotes	p.Q298X

tmVarCorpus

Id	Subject	Object	Predicate	Lexical cue
T3	95-102	ProteinMutation:p\|SUB\|Q\|298\|X	denotes	p.Q298X
T4	165-172	ProteinMutation:p\|SUB\|Y\|358\|H	denotes	p.Y358H