PubMed:19208385 / 510-722
Annnotations
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T5","span":{"begin":0,"end":212},"obj":"Sentence"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"5793","span":{"begin":16,"end":24},"obj":"OrganismTaxon"},{"id":"5794","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"},{"id":"5795","span":{"begin":86,"end":92},"obj":"GeneOrGeneProduct"},{"id":"5796","span":{"begin":182,"end":205},"obj":"GeneOrGeneProduct"}],"attributes":[{"id":"A18","pred":"db_id","subj":"5793","obj":"NCBITaxon:9606"},{"id":"A19","pred":"db_id","subj":"5794","obj":"MESH:D010013"},{"id":"A20","pred":"db_id","subj":"5795","obj":"NCBIGene:1278"},{"id":"A21","pred":"db_id","subj":"5796","obj":"NCBIGene:1278"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T11","span":{"begin":3,"end":6},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":51,"end":60},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":86,"end":92},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":141,"end":145},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":182,"end":211},"obj":"GeneOrGeneProduct"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T3","span":{"begin":86,"end":92},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":182,"end":211},"obj":"GeneOrGeneProduct"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-Disease-MeSH
{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T13","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A13","pred":"originalLabel","subj":"T13","obj":"D010013"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-GeneOrGeneProduct-v3
{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T2","span":{"begin":86,"end":92},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":182,"end":211},"obj":"GeneOrGeneProduct"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin_Mondo_095
{"project":"LitCoin_Mondo_095","denotations":[{"id":"T15","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A15","pred":"mondo_id","subj":"T15","obj":"0019019"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-MeSH-Disease-2
{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T15","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A15","pred":"ID:","subj":"T15","obj":"D010013"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-MONDO_bioort2019
{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T15","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A15","pred":"#label","subj":"T15","obj":"D010013"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-Chemical-MeSH-CHEBI
{"project":"LitCoin-Chemical-MeSH-CHEBI","denotations":[{"id":"T1","span":{"begin":43,"end":50},"obj":"ChemicalEntity"},{"id":"T4","span":{"begin":124,"end":131},"obj":"ChemicalEntity"},{"id":"T5","span":{"begin":182,"end":190},"obj":"ChemicalEntity"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_57305"},{"id":"A2","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_29947"},{"id":"A3","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_15428"},{"id":"A4","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_46883"},{"id":"A5","pred":"ID:","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_3815"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-NCBITaxon-2
{"project":"LitCoin-NCBITaxon-2","denotations":[{"id":"T3","span":{"begin":16,"end":24},"obj":"OrganismTaxon"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T5","span":{"begin":182,"end":190},"obj":"ChemicalEntity"},{"id":"T4","span":{"begin":124,"end":131},"obj":"ChemicalEntity"},{"id":"T1","span":{"begin":43,"end":50},"obj":"ChemicalEntity"},{"id":"T3","span":{"begin":182,"end":211},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":86,"end":92},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":26,"end":28},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T12992","span":{"begin":16,"end":24},"obj":"OrganismTaxon"}],"attributes":[{"id":"A5","pred":"ID:","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_3815"},{"id":"A4","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_46883"},{"id":"A3","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_15428"},{"id":"A2","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_29947"},{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_57305"},{"id":"A15","pred":"#label","subj":"T15","obj":"D010013"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}
sentences
{"project":"sentences","denotations":[{"id":"TextSentencer_T5","span":{"begin":0,"end":212},"obj":"Sentence"},{"id":"T5","span":{"begin":0,"end":212},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In all of these patients, OI was caused by glycine mutations affecting exon 49 of the COL1A2 gene, which codes for the most carboxy-terminal part of the triple-helical domain of the collagen type I alpha 2 chain."}