PubMed:18639657
Annnotations
PMID_GLOBAL
{"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":271,"end":273},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":274,"end":276},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":277,"end":279},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0016060"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0006861"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0006861"}],"text":"Protein identification pipeline for the homology-driven proteomics.\nHomology-driven proteomics is a major tool to characterize proteomes of organisms with unsequenced genomes. This paper addresses practical aspects of automated homology-driven protein identifications by LC-MS/MS on a hybrid LTQ Orbitrap mass spectrometer. All essential software elements supporting the presented pipeline are either hosted at the publicly accessible web server, or are available for free download."}
sentences
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GlyCosmos600-FMA
{"project":"GlyCosmos600-FMA","denotations":[{"id":"T1","span":{"begin":0,"end":7},"obj":"Body_part"},{"id":"T2","span":{"begin":167,"end":174},"obj":"Body_part"},{"id":"T3","span":{"begin":244,"end":251},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Protein identification pipeline for the homology-driven proteomics.\nHomology-driven proteomics is a major tool to characterize proteomes of organisms with unsequenced genomes. This paper addresses practical aspects of automated homology-driven protein identifications by LC-MS/MS on a hybrid LTQ Orbitrap mass spectrometer. All essential software elements supporting the presented pipeline are either hosted at the publicly accessible web server, or are available for free download."}
pubmed-enju-pas
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identification pipeline for the homology-driven proteomics.\nHomology-driven proteomics is a major tool to characterize proteomes of organisms with unsequenced genomes. This paper addresses practical aspects of automated homology-driven protein identifications by LC-MS/MS on a hybrid LTQ Orbitrap mass spectrometer. All essential software elements supporting the presented pipeline are either hosted at the publicly accessible web server, or are available for free download."}
Anatomy-UBERON
{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":140,"end":149},"obj":"Body_part"},{"id":"T2","span":{"begin":435,"end":438},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0000468"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0006015"}],"text":"Protein identification pipeline for the homology-driven proteomics.\nHomology-driven proteomics is a major tool to characterize proteomes of organisms with unsequenced genomes. This paper addresses practical aspects of automated homology-driven protein identifications by LC-MS/MS on a hybrid LTQ Orbitrap mass spectrometer. All essential software elements supporting the presented pipeline are either hosted at the publicly accessible web server, or are available for free download."}