PubMed:18525076 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/18525076","sourcedb":"PubMed","sourceid":"18525076","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/18525076","text":"Characteristics of carbohydrate antigen binding to the presentation protein HLA-DR.\nZwitterionic polysaccharide antigens (ZPSs) were recently shown to activate T cells in a class II major histocompatibility complex (MHCII)-dependent fashion requiring antigen presenting cell (APC)-mediated oxidative processing although little is known about the mechanism or affinity of carbohydrate presentation (Cobb BA, Wang Q, Tzianabos AO, Kasper DL. 2004. Polysaccharide processing and presentation by the MHCII pathway. Cell. 117:677-687). A recent study showed that the helical conformation of ZPSs (Wang Y, Kalka-Moll WM, Roehrl MH, Kasper DL. 2000. Structural basis of the abscess-modulating polysaccharide A2 from Bacteroides fragilis. Proc Natl Acad Sci USA. 97:13478-13483; Choi YH, Roehrl MH, Kasper DL, Wang JY. 2002. A unique structural pattern shared by T-cell-activating and abscess-regulating zwitterionic polysaccharides. Biochemistry. 41:15144-15151) is closely linked with immunogenic activity (Tzianabos AO, Onderdonk AB, Rosner B, Cisneros RL, Kasper DL. 1993. Structural features of polysaccharides that induce intra-abdominal abscesses. Science. 262:416-419) and is stabilized by a zwitterionic charge motif (Kreisman LS, Friedman JH, Neaga A, Cobb BA. 2007. Structure and function relations with a T-cell-activating polysaccharide antigen using circular dichroism. Glycobiology. 17:46-55), suggesting a strong carbohydrate structure-function relationship. In this study, we show that PSA, the ZPS from Bacteroides fragilis, associates with MHCII at high affinity and 1:1 stoichiometry through a mechanism mirroring peptide presentation. Interestingly, PSA binding was mutually exclusive with common MHCII antigens and showed significant allelic differences in binding affinity. The antigen exchange factor HLA-DM that catalyzes peptide antigen association with MHCII also increased the rate of ZPS association and was required for APC presentation and ZPS-mediated T cell activation. Finally, the zwitterionic nature of these antigens was required only for MHCII binding, and not endocytosis, processing, or vesicular trafficking to MHCII-containing vesicles. This report is the first quantitative analysis of the binding mechanism of carbohydrate antigens with MHCII and leads to a novel model for nontraditional MHCII antigen presentation during bacterial infections.","tracks":[{"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":276,"end":279},"obj":"http://www.uniprot.org/uniprot/P25054"},{"id":"T2","span":{"begin":1942,"end":1945},"obj":"http://www.uniprot.org/uniprot/P25054"},{"id":"T3","span":{"begin":425,"end":427},"obj":"http://www.uniprot.org/uniprot/Q06278"},{"id":"T4","span":{"begin":1011,"end":1013},"obj":"http://www.uniprot.org/uniprot/Q06278"},{"id":"T5","span":{"begin":436,"end":438},"obj":"http://www.uniprot.org/uniprot/Q9UNE0"},{"id":"T6","span":{"begin":633,"end":635},"obj":"http://www.uniprot.org/uniprot/Q9UNE0"},{"id":"T7","span":{"begin":798,"end":800},"obj":"http://www.uniprot.org/uniprot/Q9UNE0"},{"id":"T8","span":{"begin":1059,"end":1061},"obj":"http://www.uniprot.org/uniprot/Q9UNE0"},{"id":"T9","span":{"begin":1495,"end":1498},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T10","span":{"begin":1663,"end":1666},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T11","span":{"begin":1495,"end":1498},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T12","span":{"begin":1663,"end":1666},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T13","span":{"begin":1495,"end":1498},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T14","span":{"begin":1663,"end":1666},"obj":"http://www.uniprot.org/uniprot/P07288"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-human"},{"subj":"T2","pred":"source","obj":"uniprot-human"},{"subj":"T3","pred":"source","obj":"uniprot-human"},{"subj":"T4","pred":"source","obj":"uniprot-human"},{"subj":"T5","pred":"source","obj":"uniprot-human"},{"subj":"T6","pred":"source","obj":"uniprot-human"},{"subj":"T7","pred":"source","obj":"uniprot-human"},{"subj":"T8","pred":"source","obj":"uniprot-human"},{"subj":"T9","pred":"source","obj":"uniprot-human"},{"subj":"T10","pred":"source","obj":"uniprot-human"},{"subj":"T11","pred":"source","obj":"uniprot-human"},{"subj":"T12","pred":"source","obj":"uniprot-human"},{"subj":"T13","pred":"source","obj":"uniprot-human"},{"subj":"T14","pred":"source","obj":"uniprot-human"}]},{"project":"ICD10","denotations":[{"id":"T1","span":{"begin":173,"end":214},"obj":"http://purl.bioontology.org/ontology/ICD10/D81.7"},{"id":"T2","span":{"begin":2359,"end":2379},"obj":"http://purl.bioontology.org/ontology/ICD10/A49.9"}],"attributes":[{"subj":"T1","pred":"source","obj":"ICD10"},{"subj":"T2","pred":"source","obj":"ICD10"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":276,"end":279},"obj":"http://www.uniprot.org/uniprot/Q61315"},{"id":"T2","span":{"begin":1942,"end":1945},"obj":"http://www.uniprot.org/uniprot/Q61315"},{"id":"T3","span":{"begin":731,"end":735},"obj":"http://www.uniprot.org/uniprot/P33587"},{"id":"T4","span":{"begin":741,"end":745},"obj":"http://www.uniprot.org/uniprot/Q07417"},{"id":"T5","span":{"begin":1495,"end":1498},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T6","span":{"begin":1663,"end":1666},"obj":"http://www.uniprot.org/uniprot/Q11011"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"},{"subj":"T2","pred":"source","obj":"uniprot-mouse"},{"subj":"T3","pred":"source","obj":"uniprot-mouse"},{"subj":"T4","pred":"source","obj":"uniprot-mouse"},{"subj":"T5","pred":"source","obj":"uniprot-mouse"},{"subj":"T6","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":162,"end":167},"obj":"http://purl.bioontology.org/ontology/STY/T025"},{"id":"T2","span":{"begin":346,"end":355},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/127244"},{"id":"T3","span":{"begin":562,"end":569},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/53324"},{"id":"T4","span":{"begin":709,"end":720},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/816"},{"id":"T5","span":{"begin":709,"end":720},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/200643"},{"id":"T6","span":{"begin":1292,"end":1301},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/353209"},{"id":"T7","span":{"begin":1513,"end":1524},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/200643"},{"id":"T8","span":{"begin":1513,"end":1524},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/816"},{"id":"T9","span":{"begin":1606,"end":1615},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/127244"},{"id":"T10","span":{"begin":2119,"end":2128},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/246680"},{"id":"T11","span":{"begin":2233,"end":2242},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/127244"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T2","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T6","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T7","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T8","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T9","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T10","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T11","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":83},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":84,"end":439},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":440,"end":445},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":446,"end":510},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":511,"end":516},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":517,"end":530},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":531,"end":636},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":637,"end":642},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":643,"end":730},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":731,"end":754},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":755,"end":810},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":811,"end":816},"obj":"Sentence"},{"id":"TextSentencer_T13","span":{"begin":817,"end":925},"obj":"Sentence"},{"id":"TextSentencer_T14","span":{"begin":926,"end":939},"obj":"Sentence"},{"id":"TextSentencer_T15","span":{"begin":940,"end":1062},"obj":"Sentence"},{"id":"TextSentencer_T16","span":{"begin":1063,"end":1068},"obj":"Sentence"},{"id":"TextSentencer_T17","span":{"begin":1069,"end":1146},"obj":"Sentence"},{"id":"TextSentencer_T18","span":{"begin":1147,"end":1155},"obj":"Sentence"},{"id":"TextSentencer_T19","span":{"begin":1156,"end":1262},"obj":"Sentence"},{"id":"TextSentencer_T20","span":{"begin":1263,"end":1268},"obj":"Sentence"},{"id":"TextSentencer_T21","span":{"begin":1269,"end":1375},"obj":"Sentence"},{"id":"TextSentencer_T22","span":{"begin":1376,"end":1389},"obj":"Sentence"},{"id":"TextSentencer_T23","span":{"begin":1390,"end":1466},"obj":"Sentence"},{"id":"TextSentencer_T24","span":{"begin":1467,"end":1647},"obj":"Sentence"},{"id":"TextSentencer_T25","span":{"begin":1648,"end":1788},"obj":"Sentence"},{"id":"TextSentencer_T26","span":{"begin":1789,"end":1994},"obj":"Sentence"},{"id":"TextSentencer_T27","span":{"begin":1995,"end":2170},"obj":"Sentence"},{"id":"TextSentencer_T28","span":{"begin":2171,"end":2380},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":83},"obj":"Sentence"},{"id":"T2","span":{"begin":84,"end":439},"obj":"Sentence"},{"id":"T3","span":{"begin":440,"end":445},"obj":"Sentence"},{"id":"T4","span":{"begin":446,"end":510},"obj":"Sentence"},{"id":"T5","span":{"begin":511,"end":530},"obj":"Sentence"},{"id":"T6","span":{"begin":531,"end":636},"obj":"Sentence"},{"id":"T7","span":{"begin":637,"end":642},"obj":"Sentence"},{"id":"T8","span":{"begin":643,"end":730},"obj":"Sentence"},{"id":"T9","span":{"begin":731,"end":754},"obj":"Sentence"},{"id":"T10","span":{"begin":755,"end":810},"obj":"Sentence"},{"id":"T11","span":{"begin":811,"end":816},"obj":"Sentence"},{"id":"T12","span":{"begin":817,"end":925},"obj":"Sentence"},{"id":"T13","span":{"begin":926,"end":1062},"obj":"Sentence"},{"id":"T14","span":{"begin":1063,"end":1068},"obj":"Sentence"},{"id":"T15","span":{"begin":1069,"end":1146},"obj":"Sentence"},{"id":"T16","span":{"begin":1147,"end":1262},"obj":"Sentence"},{"id":"T17","span":{"begin":1263,"end":1268},"obj":"Sentence"},{"id":"T18","span":{"begin":1269,"end":1375},"obj":"Sentence"},{"id":"T19","span":{"begin":1376,"end":1466},"obj":"Sentence"},{"id":"T20","span":{"begin":1467,"end":1647},"obj":"Sentence"},{"id":"T21","span":{"begin":1648,"end":1788},"obj":"Sentence"},{"id":"T22","span":{"begin":1789,"end":1994},"obj":"Sentence"},{"id":"T23","span":{"begin":1995,"end":2170},"obj":"Sentence"},{"id":"T24","span":{"begin":2171,"end":2380},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":83},"obj":"Sentence"},{"id":"T2","span":{"begin":84,"end":439},"obj":"Sentence"},{"id":"T3","span":{"begin":440,"end":445},"obj":"Sentence"},{"id":"T4","span":{"begin":446,"end":510},"obj":"Sentence"},{"id":"T5","span":{"begin":511,"end":516},"obj":"Sentence"},{"id":"T6","span":{"begin":517,"end":530},"obj":"Sentence"},{"id":"T7","span":{"begin":531,"end":636},"obj":"Sentence"},{"id":"T8","span":{"begin":637,"end":642},"obj":"Sentence"},{"id":"T9","span":{"begin":643,"end":730},"obj":"Sentence"},{"id":"T10","span":{"begin":731,"end":754},"obj":"Sentence"},{"id":"T11","span":{"begin":755,"end":810},"obj":"Sentence"},{"id":"T12","span":{"begin":811,"end":816},"obj":"Sentence"},{"id":"T13","span":{"begin":817,"end":925},"obj":"Sentence"},{"id":"T14","span":{"begin":926,"end":939},"obj":"Sentence"},{"id":"T15","span":{"begin":940,"end":1062},"obj":"Sentence"},{"id":"T16","span":{"begin":1063,"end":1068},"obj":"Sentence"},{"id":"T17","span":{"begin":1069,"end":1146},"obj":"Sentence"},{"id":"T18","span":{"begin":1147,"end":1155},"obj":"Sentence"},{"id":"T19","span":{"begin":1156,"end":1262},"obj":"Sentence"},{"id":"T20","span":{"begin":1263,"end":1268},"obj":"Sentence"},{"id":"T21","span":{"begin":1269,"end":1375},"obj":"Sentence"},{"id":"T22","span":{"begin":1376,"end":1389},"obj":"Sentence"},{"id":"T23","span":{"begin":1390,"end":1466},"obj":"Sentence"},{"id":"T24","span":{"begin":1467,"end":1647},"obj":"Sentence"},{"id":"T25","span":{"begin":1648,"end":1788},"obj":"Sentence"},{"id":"T26","span":{"begin":1789,"end":1994},"obj":"Sentence"},{"id":"T27","span":{"begin":1995,"end":2170},"obj":"Sentence"},{"id":"T28","span":{"begin":2171,"end":2380},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T10","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T11","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T12","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T13","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T14","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T15","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T16","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T17","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T18","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T19","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T20","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T21","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T22","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T23","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T24","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T25","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T26","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T27","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T28","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"},{"subj":"T15","pred":"source","obj":"sentences"},{"subj":"T16","pred":"source","obj":"sentences"},{"subj":"T17","pred":"source","obj":"sentences"},{"subj":"T18","pred":"source","obj":"sentences"},{"subj":"T19","pred":"source","obj":"sentences"},{"subj":"T20","pred":"source","obj":"sentences"},{"subj":"T21","pred":"source","obj":"sentences"},{"subj":"T22","pred":"source","obj":"sentences"},{"subj":"T23","pred":"source","obj":"sentences"},{"subj":"T24","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"},{"subj":"T15","pred":"source","obj":"sentences"},{"subj":"T16","pred":"source","obj":"sentences"},{"subj":"T17","pred":"source","obj":"sentences"},{"subj":"T18","pred":"source","obj":"sentences"},{"subj":"T19","pred":"source","obj":"sentences"},{"subj":"T20","pred":"source","obj":"sentences"},{"subj":"T21","pred":"source","obj":"sentences"},{"subj":"T22","pred":"source","obj":"sentences"},{"subj":"T23","pred":"source","obj":"sentences"},{"subj":"T24","pred":"source","obj":"sentences"},{"subj":"T25","pred":"source","obj":"sentences"},{"subj":"T26","pred":"source","obj":"sentences"},{"subj":"T27","pred":"source","obj":"sentences"},{"subj":"T28","pred":"source","obj":"sentences"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0032393"},{"id":"T2","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0032394"},{"id":"T3","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0032395"},{"id":"T4","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0032393"},{"id":"T5","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0032394"},{"id":"T6","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0032395"},{"id":"T7","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0032393"},{"id":"T8","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0032394"},{"id":"T9","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0032395"},{"id":"T10","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0032393"},{"id":"T11","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0032394"},{"id":"T12","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0032395"},{"id":"T13","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0042110"},{"id":"T14","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0042110"},{"id":"T15","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0042110"},{"id":"T16","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0042110"},{"id":"T17","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0045582"},{"id":"T18","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0045582"},{"id":"T19","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0045582"},{"id":"T20","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0045582"},{"id":"T21","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0050798"},{"id":"T22","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0050798"},{"id":"T23","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0050798"},{"id":"T24","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0050798"},{"id":"T25","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0050863"},{"id":"T26","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0050863"},{"id":"T27","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0050863"},{"id":"T28","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0050863"},{"id":"T29","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0051132"},{"id":"T30","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0051132"},{"id":"T31","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0051132"},{"id":"T32","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0051132"},{"id":"T33","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_1903905"},{"id":"T34","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_1903905"},{"id":"T35","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_1903905"},{"id":"T36","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_1903905"},{"id":"T37","span":{"begin":151,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0042102"},{"id":"T38","span":{"begin":855,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0042102"},{"id":"T39","span":{"begin":1309,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0042102"},{"id":"T40","span":{"begin":1976,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0042102"},{"id":"T41","span":{"begin":251,"end":269},"obj":"http://purl.obolibrary.org/obo/GO_0019882"},{"id":"T42","span":{"begin":2331,"end":2351},"obj":"http://purl.obolibrary.org/obo/GO_0019882"},{"id":"T43","span":{"begin":398,"end":402},"obj":"http://purl.obolibrary.org/obo/GO_0042242"},{"id":"T44","span":{"begin":398,"end":402},"obj":"http://purl.obolibrary.org/obo/GO_0043802"},{"id":"T45","span":{"begin":1254,"end":1258},"obj":"http://purl.obolibrary.org/obo/GO_0042242"},{"id":"T46","span":{"begin":1254,"end":1258},"obj":"http://purl.obolibrary.org/obo/GO_0043802"},{"id":"T47","span":{"begin":741,"end":745},"obj":"http://purl.obolibrary.org/obo/GO_0070238"},{"id":"T48","span":{"begin":857,"end":872},"obj":"http://purl.obolibrary.org/obo/GO_0001775"},{"id":"T49","span":{"begin":1311,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0001775"},{"id":"T50","span":{"begin":1978,"end":1993},"obj":"http://purl.obolibrary.org/obo/GO_0001775"},{"id":"T51","span":{"begin":885,"end":895},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T52","span":{"begin":1228,"end":1230},"obj":"http://purl.obolibrary.org/obo/GO_0016992"},{"id":"T53","span":{"begin":1679,"end":1687},"obj":"http://purl.obolibrary.org/obo/GO_0085030"},{"id":"T54","span":{"begin":1801,"end":1809},"obj":"http://purl.obolibrary.org/obo/GO_0015297"},{"id":"T55","span":{"begin":2091,"end":2102},"obj":"http://purl.obolibrary.org/obo/GO_0006897"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"},{"subj":"T6","pred":"source","obj":"GO-BP"},{"subj":"T7","pred":"source","obj":"GO-BP"},{"subj":"T8","pred":"source","obj":"GO-BP"},{"subj":"T9","pred":"source","obj":"GO-BP"},{"subj":"T10","pred":"source","obj":"GO-BP"},{"subj":"T11","pred":"source","obj":"GO-BP"},{"subj":"T12","pred":"source","obj":"GO-BP"},{"subj":"T13","pred":"source","obj":"GO-BP"},{"subj":"T14","pred":"source","obj":"GO-BP"},{"subj":"T15","pred":"source","obj":"GO-BP"},{"subj":"T16","pred":"source","obj":"GO-BP"},{"subj":"T17","pred":"source","obj":"GO-BP"},{"subj":"T18","pred":"source","obj":"GO-BP"},{"subj":"T19","pred":"source","obj":"GO-BP"},{"subj":"T20","pred":"source","obj":"GO-BP"},{"subj":"T21","pred":"source","obj":"GO-BP"},{"subj":"T22","pred":"source","obj":"GO-BP"},{"subj":"T23","pred":"source","obj":"GO-BP"},{"subj":"T24","pred":"source","obj":"GO-BP"},{"subj":"T25","pred":"source","obj":"GO-BP"},{"subj":"T26","pred":"source","obj":"GO-BP"},{"subj":"T27","pred":"source","obj":"GO-BP"},{"subj":"T28","pred":"source","obj":"GO-BP"},{"subj":"T29","pred":"source","obj":"GO-BP"},{"subj":"T30","pred":"source","obj":"GO-BP"},{"subj":"T31","pred":"source","obj":"GO-BP"},{"subj":"T32","pred":"source","obj":"GO-BP"},{"subj":"T33","pred":"source","obj":"GO-BP"},{"subj":"T34","pred":"source","obj":"GO-BP"},{"subj":"T35","pred":"source","obj":"GO-BP"},{"subj":"T36","pred":"source","obj":"GO-BP"},{"subj":"T37","pred":"source","obj":"GO-BP"},{"subj":"T38","pred":"source","obj":"GO-BP"},{"subj":"T39","pred":"source","obj":"GO-BP"},{"subj":"T40","pred":"source","obj":"GO-BP"},{"subj":"T41","pred":"source","obj":"GO-BP"},{"subj":"T42","pred":"source","obj":"GO-BP"},{"subj":"T43","pred":"source","obj":"GO-BP"},{"subj":"T44","pred":"source","obj":"GO-BP"},{"subj":"T45","pred":"source","obj":"GO-BP"},{"subj":"T46","pred":"source","obj":"GO-BP"},{"subj":"T47","pred":"source","obj":"GO-BP"},{"subj":"T48","pred":"source","obj":"GO-BP"},{"subj":"T49","pred":"source","obj":"GO-BP"},{"subj":"T50","pred":"source","obj":"GO-BP"},{"subj":"T51","pred":"source","obj":"GO-BP"},{"subj":"T52","pred":"source","obj":"GO-BP"},{"subj":"T53","pred":"source","obj":"GO-BP"},{"subj":"T54","pred":"source","obj":"GO-BP"},{"subj":"T55","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T1","span":{"begin":32,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T2","span":{"begin":40,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T3","span":{"begin":1667,"end":1674},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T4","span":{"begin":1771,"end":1778},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T5","span":{"begin":2074,"end":2081},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T6","span":{"begin":2225,"end":2232},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T7","span":{"begin":40,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T8","span":{"begin":1667,"end":1674},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T9","span":{"begin":1771,"end":1778},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T10","span":{"begin":2074,"end":2081},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T11","span":{"begin":2225,"end":2232},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T12","span":{"begin":40,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T13","span":{"begin":1667,"end":1674},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T14","span":{"begin":1771,"end":1778},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T15","span":{"begin":2074,"end":2081},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T16","span":{"begin":2225,"end":2232},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T17","span":{"begin":40,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T18","span":{"begin":1667,"end":1674},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T19","span":{"begin":1771,"end":1778},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T20","span":{"begin":2074,"end":2081},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T21","span":{"begin":2225,"end":2232},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-MF"},{"subj":"T2","pred":"source","obj":"GO-MF"},{"subj":"T3","pred":"source","obj":"GO-MF"},{"subj":"T4","pred":"source","obj":"GO-MF"},{"subj":"T5","pred":"source","obj":"GO-MF"},{"subj":"T6","pred":"source","obj":"GO-MF"},{"subj":"T7","pred":"source","obj":"GO-MF"},{"subj":"T8","pred":"source","obj":"GO-MF"},{"subj":"T9","pred":"source","obj":"GO-MF"},{"subj":"T10","pred":"source","obj":"GO-MF"},{"subj":"T11","pred":"source","obj":"GO-MF"},{"subj":"T12","pred":"source","obj":"GO-MF"},{"subj":"T13","pred":"source","obj":"GO-MF"},{"subj":"T14","pred":"source","obj":"GO-MF"},{"subj":"T15","pred":"source","obj":"GO-MF"},{"subj":"T16","pred":"source","obj":"GO-MF"},{"subj":"T17","pred":"source","obj":"GO-MF"},{"subj":"T18","pred":"source","obj":"GO-MF"},{"subj":"T19","pred":"source","obj":"GO-MF"},{"subj":"T20","pred":"source","obj":"GO-MF"},{"subj":"T21","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":162,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2","span":{"begin":270,"end":274},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T3","span":{"begin":857,"end":861},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4","span":{"begin":1311,"end":1315},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T5","span":{"begin":511,"end":515},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T6","span":{"begin":276,"end":279},"obj":"http://purl.obolibrary.org/obo/GO_0005680"},{"id":"T7","span":{"begin":1942,"end":1945},"obj":"http://purl.obolibrary.org/obo/GO_0005680"},{"id":"T8","span":{"begin":2161,"end":2169},"obj":"http://purl.obolibrary.org/obo/GO_0031982"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"},{"subj":"T2","pred":"source","obj":"GO-CC"},{"subj":"T3","pred":"source","obj":"GO-CC"},{"subj":"T4","pred":"source","obj":"GO-CC"},{"subj":"T5","pred":"source","obj":"GO-CC"},{"subj":"T6","pred":"source","obj":"GO-CC"},{"subj":"T7","pred":"source","obj":"GO-CC"},{"subj":"T8","pred":"source","obj":"GO-CC"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":709,"end":729},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":1513,"end":1533},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"817"},{"id":"A2","pred":"db_id","subj":"T2","obj":"817"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"}]},{"project":"Lectin","denotations":[{"id":"Lectin_T1","span":{"begin":1495,"end":1498},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T2","span":{"begin":1663,"end":1666},"obj":"https://acgg.asia/db/lfdb/LfDB0181"}],"attributes":[{"subj":"Lectin_T1","pred":"source","obj":"Lectin"},{"subj":"Lectin_T2","pred":"source","obj":"Lectin"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":667,"end":674},"obj":"Disease"},{"id":"T2","span":{"begin":877,"end":884},"obj":"Disease"},{"id":"T3","span":{"begin":1136,"end":1145},"obj":"Disease"},{"id":"T4","span":{"begin":2359,"end":2379},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005227"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005227"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005227"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005113"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"},{"subj":"T3","pred":"source","obj":"mondo_disease"},{"subj":"T4","pred":"source","obj":"mondo_disease"}]},{"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":403,"end":405},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":667,"end":674},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":877,"end":884},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":1228,"end":1230},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":1259,"end":1261},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":1821,"end":1823},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T8","span":{"begin":2359,"end":2379},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0003024"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0005227"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0005227"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"0009723"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"0003024"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"0005015"},{"id":"A7","pred":"mondo_id","subj":"T6","obj":"0016367"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"0005113"},{"subj":"T1","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T2","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T3","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T4","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T5","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T6","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T8","pred":"source","obj":"PMID_GLOBAL"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":855,"end":861},"obj":"Body_part"},{"id":"T2","span":{"begin":1309,"end":1315},"obj":"Body_part"},{"id":"T3","span":{"begin":1976,"end":1982},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":667,"end":674},"obj":"Phenotype"},{"id":"T2","span":{"begin":877,"end":884},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0025615"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0025615"},{"subj":"T1","pred":"source","obj":"HP-phenotype"},{"subj":"T2","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":160,"end":167},"obj":"Cell"},{"id":"T2","span":{"begin":855,"end":861},"obj":"Cell"},{"id":"T3","span":{"begin":1309,"end":1315},"obj":"Cell"},{"id":"T4","span":{"begin":1976,"end":1982},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0000084"},{"id":"A2","pred":"cl_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL:0000084"},{"id":"A3","pred":"cl_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL:0000084"},{"id":"A4","pred":"cl_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CL:0000084"},{"subj":"T1","pred":"source","obj":"CL-cell"},{"subj":"T2","pred":"source","obj":"CL-cell"},{"subj":"T3","pred":"source","obj":"CL-cell"},{"subj":"T4","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"uniprot-human","color":"#9399ec","default":true},{"id":"ICD10","color":"#b3ec93"},{"id":"uniprot-mouse","color":"#ec93cd"},{"id":"GlycoBiology-NCBITAXON","color":"#93e7ec"},{"id":"sentences","color":"#ecd693"},{"id":"GO-BP","color":"#bc93ec"},{"id":"GO-MF","color":"#93eca2"},{"id":"GO-CC","color":"#ec939d"},{"id":"NCBITAXON","color":"#93b7ec"},{"id":"Lectin","color":"#d1ec93"},{"id":"mondo_disease","color":"#ec93eb"},{"id":"PMID_GLOBAL","color":"#93ecd3"},{"id":"Anatomy-UBERON","color":"#ecb993"},{"id":"HP-phenotype","color":"#9f93ec"},{"id":"CL-cell","color":"#a1ec93"}]}]}}