PubMed:18525076
Annnotations
PMID_GLOBAL
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 403-405 | DiseaseOrPhenotypicFeature | denotes | BA | 0003024 |
| T2 | 667-674 | DiseaseOrPhenotypicFeature | denotes | abscess | 0005227 |
| T3 | 877-884 | DiseaseOrPhenotypicFeature | denotes | abscess | 0005227 |
| T4 | 1228-1230 | DiseaseOrPhenotypicFeature | denotes | LS | 0009723 |
| T5 | 1259-1261 | DiseaseOrPhenotypicFeature | denotes | BA | 0003024 |
| T6 | 1821-1823 | DiseaseOrPhenotypicFeature | denotes | DM | 0005015|0016367 |
| T8 | 2359-2379 | DiseaseOrPhenotypicFeature | denotes | bacterial infections | 0005113 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-83 | Sentence | denotes | Characteristics of carbohydrate antigen binding to the presentation protein HLA-DR. |
| TextSentencer_T2 | 84-439 | Sentence | denotes | Zwitterionic polysaccharide antigens (ZPSs) were recently shown to activate T cells in a class II major histocompatibility complex (MHCII)-dependent fashion requiring antigen presenting cell (APC)-mediated oxidative processing although little is known about the mechanism or affinity of carbohydrate presentation (Cobb BA, Wang Q, Tzianabos AO, Kasper DL. |
| TextSentencer_T3 | 440-445 | Sentence | denotes | 2004. |
| TextSentencer_T4 | 446-510 | Sentence | denotes | Polysaccharide processing and presentation by the MHCII pathway. |
| TextSentencer_T5 | 511-516 | Sentence | denotes | Cell. |
| TextSentencer_T6 | 517-530 | Sentence | denotes | 117:677-687). |
| TextSentencer_T7 | 531-636 | Sentence | denotes | A recent study showed that the helical conformation of ZPSs (Wang Y, Kalka-Moll WM, Roehrl MH, Kasper DL. |
| TextSentencer_T8 | 637-642 | Sentence | denotes | 2000. |
| TextSentencer_T9 | 643-730 | Sentence | denotes | Structural basis of the abscess-modulating polysaccharide A2 from Bacteroides fragilis. |
| TextSentencer_T10 | 731-754 | Sentence | denotes | Proc Natl Acad Sci USA. |
| TextSentencer_T11 | 755-810 | Sentence | denotes | 97:13478-13483; Choi YH, Roehrl MH, Kasper DL, Wang JY. |
| TextSentencer_T12 | 811-816 | Sentence | denotes | 2002. |
| TextSentencer_T13 | 817-925 | Sentence | denotes | A unique structural pattern shared by T-cell-activating and abscess-regulating zwitterionic polysaccharides. |
| TextSentencer_T14 | 926-939 | Sentence | denotes | Biochemistry. |
| TextSentencer_T15 | 940-1062 | Sentence | denotes | 41:15144-15151) is closely linked with immunogenic activity (Tzianabos AO, Onderdonk AB, Rosner B, Cisneros RL, Kasper DL. |
| TextSentencer_T16 | 1063-1068 | Sentence | denotes | 1993. |
| TextSentencer_T17 | 1069-1146 | Sentence | denotes | Structural features of polysaccharides that induce intra-abdominal abscesses. |
| TextSentencer_T18 | 1147-1155 | Sentence | denotes | Science. |
| TextSentencer_T19 | 1156-1262 | Sentence | denotes | 262:416-419) and is stabilized by a zwitterionic charge motif (Kreisman LS, Friedman JH, Neaga A, Cobb BA. |
| TextSentencer_T20 | 1263-1268 | Sentence | denotes | 2007. |
| TextSentencer_T21 | 1269-1375 | Sentence | denotes | Structure and function relations with a T-cell-activating polysaccharide antigen using circular dichroism. |
| TextSentencer_T22 | 1376-1389 | Sentence | denotes | Glycobiology. |
| TextSentencer_T23 | 1390-1466 | Sentence | denotes | 17:46-55), suggesting a strong carbohydrate structure-function relationship. |
| TextSentencer_T24 | 1467-1647 | Sentence | denotes | In this study, we show that PSA, the ZPS from Bacteroides fragilis, associates with MHCII at high affinity and 1:1 stoichiometry through a mechanism mirroring peptide presentation. |
| TextSentencer_T25 | 1648-1788 | Sentence | denotes | Interestingly, PSA binding was mutually exclusive with common MHCII antigens and showed significant allelic differences in binding affinity. |
| TextSentencer_T26 | 1789-1994 | Sentence | denotes | The antigen exchange factor HLA-DM that catalyzes peptide antigen association with MHCII also increased the rate of ZPS association and was required for APC presentation and ZPS-mediated T cell activation. |
| TextSentencer_T27 | 1995-2170 | Sentence | denotes | Finally, the zwitterionic nature of these antigens was required only for MHCII binding, and not endocytosis, processing, or vesicular trafficking to MHCII-containing vesicles. |
| TextSentencer_T28 | 2171-2380 | Sentence | denotes | This report is the first quantitative analysis of the binding mechanism of carbohydrate antigens with MHCII and leads to a novel model for nontraditional MHCII antigen presentation during bacterial infections. |
| T1 | 0-83 | Sentence | denotes | Characteristics of carbohydrate antigen binding to the presentation protein HLA-DR. |
| T2 | 84-439 | Sentence | denotes | Zwitterionic polysaccharide antigens (ZPSs) were recently shown to activate T cells in a class II major histocompatibility complex (MHCII)-dependent fashion requiring antigen presenting cell (APC)-mediated oxidative processing although little is known about the mechanism or affinity of carbohydrate presentation (Cobb BA, Wang Q, Tzianabos AO, Kasper DL. |
| T3 | 440-445 | Sentence | denotes | 2004. |
| T4 | 446-510 | Sentence | denotes | Polysaccharide processing and presentation by the MHCII pathway. |
| T5 | 511-530 | Sentence | denotes | Cell. 117:677-687). |
| T6 | 531-636 | Sentence | denotes | A recent study showed that the helical conformation of ZPSs (Wang Y, Kalka-Moll WM, Roehrl MH, Kasper DL. |
| T7 | 637-642 | Sentence | denotes | 2000. |
| T8 | 643-730 | Sentence | denotes | Structural basis of the abscess-modulating polysaccharide A2 from Bacteroides fragilis. |
| T9 | 731-754 | Sentence | denotes | Proc Natl Acad Sci USA. |
| T10 | 755-810 | Sentence | denotes | 97:13478-13483; Choi YH, Roehrl MH, Kasper DL, Wang JY. |
| T11 | 811-816 | Sentence | denotes | 2002. |
| T12 | 817-925 | Sentence | denotes | A unique structural pattern shared by T-cell-activating and abscess-regulating zwitterionic polysaccharides. |
| T13 | 926-1062 | Sentence | denotes | Biochemistry. 41:15144-15151) is closely linked with immunogenic activity (Tzianabos AO, Onderdonk AB, Rosner B, Cisneros RL, Kasper DL. |
| T14 | 1063-1068 | Sentence | denotes | 1993. |
| T15 | 1069-1146 | Sentence | denotes | Structural features of polysaccharides that induce intra-abdominal abscesses. |
| T16 | 1147-1262 | Sentence | denotes | Science. 262:416-419) and is stabilized by a zwitterionic charge motif (Kreisman LS, Friedman JH, Neaga A, Cobb BA. |
| T17 | 1263-1268 | Sentence | denotes | 2007. |
| T18 | 1269-1375 | Sentence | denotes | Structure and function relations with a T-cell-activating polysaccharide antigen using circular dichroism. |
| T19 | 1376-1466 | Sentence | denotes | Glycobiology. 17:46-55), suggesting a strong carbohydrate structure-function relationship. |
| T20 | 1467-1647 | Sentence | denotes | In this study, we show that PSA, the ZPS from Bacteroides fragilis, associates with MHCII at high affinity and 1:1 stoichiometry through a mechanism mirroring peptide presentation. |
| T21 | 1648-1788 | Sentence | denotes | Interestingly, PSA binding was mutually exclusive with common MHCII antigens and showed significant allelic differences in binding affinity. |
| T22 | 1789-1994 | Sentence | denotes | The antigen exchange factor HLA-DM that catalyzes peptide antigen association with MHCII also increased the rate of ZPS association and was required for APC presentation and ZPS-mediated T cell activation. |
| T23 | 1995-2170 | Sentence | denotes | Finally, the zwitterionic nature of these antigens was required only for MHCII binding, and not endocytosis, processing, or vesicular trafficking to MHCII-containing vesicles. |
| T24 | 2171-2380 | Sentence | denotes | This report is the first quantitative analysis of the binding mechanism of carbohydrate antigens with MHCII and leads to a novel model for nontraditional MHCII antigen presentation during bacterial infections. |
| T1 | 0-83 | Sentence | denotes | Characteristics of carbohydrate antigen binding to the presentation protein HLA-DR. |
| T2 | 84-439 | Sentence | denotes | Zwitterionic polysaccharide antigens (ZPSs) were recently shown to activate T cells in a class II major histocompatibility complex (MHCII)-dependent fashion requiring antigen presenting cell (APC)-mediated oxidative processing although little is known about the mechanism or affinity of carbohydrate presentation (Cobb BA, Wang Q, Tzianabos AO, Kasper DL. |
| T3 | 440-445 | Sentence | denotes | 2004. |
| T4 | 446-510 | Sentence | denotes | Polysaccharide processing and presentation by the MHCII pathway. |
| T5 | 511-516 | Sentence | denotes | Cell. |
| T6 | 517-530 | Sentence | denotes | 117:677-687). |
| T7 | 531-636 | Sentence | denotes | A recent study showed that the helical conformation of ZPSs (Wang Y, Kalka-Moll WM, Roehrl MH, Kasper DL. |
| T8 | 637-642 | Sentence | denotes | 2000. |
| T9 | 643-730 | Sentence | denotes | Structural basis of the abscess-modulating polysaccharide A2 from Bacteroides fragilis. |
| T10 | 731-754 | Sentence | denotes | Proc Natl Acad Sci USA. |
| T11 | 755-810 | Sentence | denotes | 97:13478-13483; Choi YH, Roehrl MH, Kasper DL, Wang JY. |
| T12 | 811-816 | Sentence | denotes | 2002. |
| T13 | 817-925 | Sentence | denotes | A unique structural pattern shared by T-cell-activating and abscess-regulating zwitterionic polysaccharides. |
| T14 | 926-939 | Sentence | denotes | Biochemistry. |
| T15 | 940-1062 | Sentence | denotes | 41:15144-15151) is closely linked with immunogenic activity (Tzianabos AO, Onderdonk AB, Rosner B, Cisneros RL, Kasper DL. |
| T16 | 1063-1068 | Sentence | denotes | 1993. |
| T17 | 1069-1146 | Sentence | denotes | Structural features of polysaccharides that induce intra-abdominal abscesses. |
| T18 | 1147-1155 | Sentence | denotes | Science. |
| T19 | 1156-1262 | Sentence | denotes | 262:416-419) and is stabilized by a zwitterionic charge motif (Kreisman LS, Friedman JH, Neaga A, Cobb BA. |
| T20 | 1263-1268 | Sentence | denotes | 2007. |
| T21 | 1269-1375 | Sentence | denotes | Structure and function relations with a T-cell-activating polysaccharide antigen using circular dichroism. |
| T22 | 1376-1389 | Sentence | denotes | Glycobiology. |
| T23 | 1390-1466 | Sentence | denotes | 17:46-55), suggesting a strong carbohydrate structure-function relationship. |
| T24 | 1467-1647 | Sentence | denotes | In this study, we show that PSA, the ZPS from Bacteroides fragilis, associates with MHCII at high affinity and 1:1 stoichiometry through a mechanism mirroring peptide presentation. |
| T25 | 1648-1788 | Sentence | denotes | Interestingly, PSA binding was mutually exclusive with common MHCII antigens and showed significant allelic differences in binding affinity. |
| T26 | 1789-1994 | Sentence | denotes | The antigen exchange factor HLA-DM that catalyzes peptide antigen association with MHCII also increased the rate of ZPS association and was required for APC presentation and ZPS-mediated T cell activation. |
| T27 | 1995-2170 | Sentence | denotes | Finally, the zwitterionic nature of these antigens was required only for MHCII binding, and not endocytosis, processing, or vesicular trafficking to MHCII-containing vesicles. |
| T28 | 2171-2380 | Sentence | denotes | This report is the first quantitative analysis of the binding mechanism of carbohydrate antigens with MHCII and leads to a novel model for nontraditional MHCII antigen presentation during bacterial infections. |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 173-214 | http://purl.bioontology.org/ontology/ICD10/D81.7 | denotes | class II major histocompatibility complex |
| T2 | 2359-2379 | http://purl.bioontology.org/ontology/ICD10/A49.9 | denotes | bacterial infections |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 276-279 | http://www.uniprot.org/uniprot/P25054 | denotes | APC |
| T2 | 1942-1945 | http://www.uniprot.org/uniprot/P25054 | denotes | APC |
| T3 | 425-427 | http://www.uniprot.org/uniprot/Q06278 | denotes | AO |
| T4 | 1011-1013 | http://www.uniprot.org/uniprot/Q06278 | denotes | AO |
| T5 | 436-438 | http://www.uniprot.org/uniprot/Q9UNE0 | denotes | DL |
| T6 | 633-635 | http://www.uniprot.org/uniprot/Q9UNE0 | denotes | DL |
| T7 | 798-800 | http://www.uniprot.org/uniprot/Q9UNE0 | denotes | DL |
| T8 | 1059-1061 | http://www.uniprot.org/uniprot/Q9UNE0 | denotes | DL |
| T9 | 1495-1498 | http://www.uniprot.org/uniprot/Q9Y617 | denotes | PSA |
| T10 | 1663-1666 | http://www.uniprot.org/uniprot/Q9Y617 | denotes | PSA |
| T11 | 1495-1498 | http://www.uniprot.org/uniprot/P55786 | denotes | PSA |
| T12 | 1663-1666 | http://www.uniprot.org/uniprot/P55786 | denotes | PSA |
| T13 | 1495-1498 | http://www.uniprot.org/uniprot/P07288 | denotes | PSA |
| T14 | 1663-1666 | http://www.uniprot.org/uniprot/P07288 | denotes | PSA |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 276-279 | http://www.uniprot.org/uniprot/Q61315 | denotes | APC |
| T2 | 1942-1945 | http://www.uniprot.org/uniprot/Q61315 | denotes | APC |
| T3 | 731-735 | http://www.uniprot.org/uniprot/P33587 | denotes | Proc |
| T4 | 741-745 | http://www.uniprot.org/uniprot/Q07417 | denotes | Acad |
| T5 | 1495-1498 | http://www.uniprot.org/uniprot/Q11011 | denotes | PSA |
| T6 | 1663-1666 | http://www.uniprot.org/uniprot/Q11011 | denotes | PSA |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 162-167 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T2 | 346-355 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanism |
| T3 | 562-569 | http://purl.bioontology.org/ontology/NCBITAXON/53324 | denotes | helical |
| T4 | 709-720 | http://purl.bioontology.org/ontology/NCBITAXON/816 | denotes | Bacteroides |
| T5 | 709-720 | http://purl.bioontology.org/ontology/NCBITAXON/200643 | denotes | Bacteroides |
| T6 | 1292-1301 | http://purl.bioontology.org/ontology/NCBITAXON/353209 | denotes | relations |
| T7 | 1513-1524 | http://purl.bioontology.org/ontology/NCBITAXON/200643 | denotes | Bacteroides |
| T8 | 1513-1524 | http://purl.bioontology.org/ontology/NCBITAXON/816 | denotes | Bacteroides |
| T9 | 1606-1615 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanism |
| T10 | 2119-2128 | http://purl.bioontology.org/ontology/NCBITAXON/246680 | denotes | vesicular |
| T11 | 2233-2242 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanism |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 151-167 | http://purl.obolibrary.org/obo/GO_0032393 | denotes | activate T cells |
| T2 | 151-167 | http://purl.obolibrary.org/obo/GO_0032394 | denotes | activate T cells |
| T3 | 151-167 | http://purl.obolibrary.org/obo/GO_0032395 | denotes | activate T cells |
| T4 | 855-872 | http://purl.obolibrary.org/obo/GO_0032393 | denotes | T-cell-activating |
| T5 | 855-872 | http://purl.obolibrary.org/obo/GO_0032394 | denotes | T-cell-activating |
| T6 | 855-872 | http://purl.obolibrary.org/obo/GO_0032395 | denotes | T-cell-activating |
| T7 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0032393 | denotes | T-cell-activating |
| T8 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0032394 | denotes | T-cell-activating |
| T9 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0032395 | denotes | T-cell-activating |
| T10 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0032393 | denotes | T cell activation |
| T11 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0032394 | denotes | T cell activation |
| T12 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0032395 | denotes | T cell activation |
| T13 | 151-167 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | activate T cells |
| T14 | 855-872 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T-cell-activating |
| T15 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T-cell-activating |
| T16 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T cell activation |
| T17 | 151-167 | http://purl.obolibrary.org/obo/GO_0045582 | denotes | activate T cells |
| T18 | 855-872 | http://purl.obolibrary.org/obo/GO_0045582 | denotes | T-cell-activating |
| T19 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0045582 | denotes | T-cell-activating |
| T20 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0045582 | denotes | T cell activation |
| T21 | 151-167 | http://purl.obolibrary.org/obo/GO_0050798 | denotes | activate T cells |
| T22 | 855-872 | http://purl.obolibrary.org/obo/GO_0050798 | denotes | T-cell-activating |
| T23 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0050798 | denotes | T-cell-activating |
| T24 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0050798 | denotes | T cell activation |
| T25 | 151-167 | http://purl.obolibrary.org/obo/GO_0050863 | denotes | activate T cells |
| T26 | 855-872 | http://purl.obolibrary.org/obo/GO_0050863 | denotes | T-cell-activating |
| T27 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0050863 | denotes | T-cell-activating |
| T28 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0050863 | denotes | T cell activation |
| T29 | 151-167 | http://purl.obolibrary.org/obo/GO_0051132 | denotes | activate T cells |
| T30 | 855-872 | http://purl.obolibrary.org/obo/GO_0051132 | denotes | T-cell-activating |
| T31 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0051132 | denotes | T-cell-activating |
| T32 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0051132 | denotes | T cell activation |
| T33 | 151-167 | http://purl.obolibrary.org/obo/GO_1903905 | denotes | activate T cells |
| T34 | 855-872 | http://purl.obolibrary.org/obo/GO_1903905 | denotes | T-cell-activating |
| T35 | 1309-1326 | http://purl.obolibrary.org/obo/GO_1903905 | denotes | T-cell-activating |
| T36 | 1976-1993 | http://purl.obolibrary.org/obo/GO_1903905 | denotes | T cell activation |
| T37 | 151-167 | http://purl.obolibrary.org/obo/GO_0042102 | denotes | activate T cells |
| T38 | 855-872 | http://purl.obolibrary.org/obo/GO_0042102 | denotes | T-cell-activating |
| T39 | 1309-1326 | http://purl.obolibrary.org/obo/GO_0042102 | denotes | T-cell-activating |
| T40 | 1976-1993 | http://purl.obolibrary.org/obo/GO_0042102 | denotes | T cell activation |
| T41 | 251-269 | http://purl.obolibrary.org/obo/GO_0019882 | denotes | antigen presenting |
| T42 | 2331-2351 | http://purl.obolibrary.org/obo/GO_0019882 | denotes | antigen presentation |
| T43 | 398-402 | http://purl.obolibrary.org/obo/GO_0042242 | denotes | Cobb |
| T44 | 398-402 | http://purl.obolibrary.org/obo/GO_0043802 | denotes | Cobb |
| T45 | 1254-1258 | http://purl.obolibrary.org/obo/GO_0042242 | denotes | Cobb |
| T46 | 1254-1258 | http://purl.obolibrary.org/obo/GO_0043802 | denotes | Cobb |
| T47 | 741-745 | http://purl.obolibrary.org/obo/GO_0070238 | denotes | Acad |
| T48 | 857-872 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell-activating |
| T49 | 1311-1326 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell-activating |
| T50 | 1978-1993 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activation |
| T51 | 885-895 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulating |
| T52 | 1228-1230 | http://purl.obolibrary.org/obo/GO_0016992 | denotes | LS |
| T53 | 1679-1687 | http://purl.obolibrary.org/obo/GO_0085030 | denotes | mutually |
| T54 | 1801-1809 | http://purl.obolibrary.org/obo/GO_0015297 | denotes | exchange |
| T55 | 2091-2102 | http://purl.obolibrary.org/obo/GO_0006897 | denotes | endocytosis |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 32-47 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antigen binding |
| T2 | 40-47 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T3 | 1667-1674 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T4 | 1771-1778 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T5 | 2074-2081 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T6 | 2225-2232 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T7 | 40-47 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T8 | 1667-1674 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T9 | 1771-1778 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T10 | 2074-2081 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T11 | 2225-2232 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T12 | 40-47 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T13 | 1667-1674 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T14 | 1771-1778 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T15 | 2074-2081 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T16 | 2225-2232 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T17 | 40-47 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T18 | 1667-1674 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T19 | 1771-1778 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T20 | 2074-2081 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T21 | 2225-2232 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 162-167 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T2 | 270-274 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T3 | 857-861 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T4 | 1311-1315 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T5 | 511-515 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
| T6 | 276-279 | http://purl.obolibrary.org/obo/GO_0005680 | denotes | APC |
| T7 | 1942-1945 | http://purl.obolibrary.org/obo/GO_0005680 | denotes | APC |
| T8 | 2161-2169 | http://purl.obolibrary.org/obo/GO_0031982 | denotes | vesicles |
Lectin
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| Lectin_T1 | 1495-1498 | https://acgg.asia/db/lfdb/LfDB0181 | denotes | PSA |
| Lectin_T2 | 1663-1666 | https://acgg.asia/db/lfdb/LfDB0181 | denotes | PSA |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 667-674 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T2 | 877-884 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T3 | 1136-1145 | Disease | denotes | abscesses | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T4 | 2359-2379 | Disease | denotes | bacterial infections | http://purl.obolibrary.org/obo/MONDO_0005113 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 709-729 | OrganismTaxon | denotes | Bacteroides fragilis | 817 |
| T2 | 1513-1533 | OrganismTaxon | denotes | Bacteroides fragilis | 817 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 855-861 | Body_part | denotes | T-cell | http://purl.obolibrary.org/obo/CL_0000084 |
| T2 | 1309-1315 | Body_part | denotes | T-cell | http://purl.obolibrary.org/obo/CL_0000084 |
| T3 | 1976-1982 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 667-674 | Phenotype | denotes | abscess | HP:0025615 |
| T2 | 877-884 | Phenotype | denotes | abscess | HP:0025615 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 160-167 | Cell | denotes | T cells | http://purl.obolibrary.org/obo/CL:0000084 |
| T2 | 855-861 | Cell | denotes | T-cell | http://purl.obolibrary.org/obo/CL:0000084 |
| T3 | 1309-1315 | Cell | denotes | T-cell | http://purl.obolibrary.org/obo/CL:0000084 |
| T4 | 1976-1982 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |