PubMed:17956937 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/17956937","sourcedb":"PubMed","sourceid":"17956937","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/17956937","text":"Oligosaccharide profiles of the prostate specific antigen in free and complexed forms from the prostate cancer patient serum and in seminal plasma: a glycopeptide approach.\nThe oligosaccharide structures of prostate specific antigen (PSA) are expected to be useful in discriminating prostate cancer from benign conditions both accompanied by increased serum PSA levels. A large proportion of PSA forms a covalent complex with a glycoprotein, alpha(1)-antichymotrypsin, in human blood. In the present study, the glycan profiles of free and complexed forms of PSA from cancer patient serum and of seminal plasma PSA were compared by analyzing the glycopeptides obtained by lysylendopeptidase digestion of the electrophoretically separated PSA with mass spectrometry. The profiles of the PSA N-glycans from the free and complexed molecules were quite similar to each other and consisted of fucosylated biantennary oligosaccharides as the major class. They were mostly sialylated, and a considerable sialic acid fraction was alpha2,3-linked as determined by Streptococcus pneumoniae neuraminidase digestion of the glycopeptides. In the seminal plasma PSA, high-mannose and hybrid types of oligosaccharides were predominant, and the sialic acids attached to the latter as well as to biantennary oligosaccahrides were exclusively alpha2,6-linked because they were removed by Arthrobacter ureafaciens neuraminidase but resistant to S. pneumoniae neuraminidase. Complex-type oligosaccharides from other sources were found in the seminal plasma sample, indicating that analysis of released glycans carries a risk of being misleading. The results suggest that identification of alpha2,3-linked sialic acids on PSA potentially discriminates malignant from benign conditions, if the analysis is applied to oligosaccharides specifically attached to the N-glycosylation site of PSA in either a free or a complexed form in the serum.","tracks":[{"project":"Glycan-Motif","denotations":[{"id":"T1","span":{"begin":996,"end":1007},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"},{"id":"T2","span":{"begin":1157,"end":1164},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T3","span":{"begin":1228,"end":1240},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"},{"id":"T4","span":{"begin":1684,"end":1696},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycan-Motif"},{"subj":"T2","pred":"source","obj":"Glycan-Motif"},{"subj":"T3","pred":"source","obj":"Glycan-Motif"},{"subj":"T4","pred":"source","obj":"Glycan-Motif"}]},{"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T1","span":{"begin":996,"end":1007},"obj":"Glycan_Motif"},{"id":"T2","span":{"begin":1157,"end":1164},"obj":"Glycan_Motif"},{"id":"T3","span":{"begin":1228,"end":1240},"obj":"Glycan_Motif"},{"id":"T4","span":{"begin":1684,"end":1696},"obj":"Glycan_Motif"}],"attributes":[{"id":"A1","pred":"image","subj":"T1","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY"},{"id":"A2","pred":"image","subj":"T2","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A3","pred":"image","subj":"T3","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY"},{"id":"A4","pred":"image","subj":"T4","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY"},{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T3","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T4","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"}]},{"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":996,"end":1007},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"},{"id":"T2","span":{"begin":1157,"end":1164},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T3","span":{"begin":1228,"end":1240},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"},{"id":"T4","span":{"begin":1684,"end":1696},"obj":"https://glytoucan.org/Structures/Glycans/G81533KY"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T3","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T4","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":172},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":173,"end":369},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":370,"end":484},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":485,"end":764},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":765,"end":947},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":948,"end":1124},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":1125,"end":1453},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1454,"end":1624},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1625,"end":1918},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":172},"obj":"Sentence"},{"id":"T2","span":{"begin":173,"end":369},"obj":"Sentence"},{"id":"T3","span":{"begin":370,"end":484},"obj":"Sentence"},{"id":"T4","span":{"begin":485,"end":764},"obj":"Sentence"},{"id":"T5","span":{"begin":765,"end":947},"obj":"Sentence"},{"id":"T6","span":{"begin":948,"end":1124},"obj":"Sentence"},{"id":"T7","span":{"begin":1125,"end":1453},"obj":"Sentence"},{"id":"T8","span":{"begin":1454,"end":1624},"obj":"Sentence"},{"id":"T9","span":{"begin":1625,"end":1918},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":172},"obj":"Sentence"},{"id":"T2","span":{"begin":173,"end":369},"obj":"Sentence"},{"id":"T3","span":{"begin":370,"end":484},"obj":"Sentence"},{"id":"T4","span":{"begin":485,"end":764},"obj":"Sentence"},{"id":"T5","span":{"begin":765,"end":947},"obj":"Sentence"},{"id":"T6","span":{"begin":948,"end":1124},"obj":"Sentence"},{"id":"T7","span":{"begin":1125,"end":1453},"obj":"Sentence"},{"id":"T8","span":{"begin":1454,"end":1624},"obj":"Sentence"},{"id":"T9","span":{"begin":1625,"end":1918},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":32,"end":40},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T2","span":{"begin":95,"end":103},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T3","span":{"begin":207,"end":215},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T4","span":{"begin":283,"end":291},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T5","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/MAT_0000083"},{"id":"T6","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/MAT_0000315"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T2","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T3","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T4","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T5","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T6","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":283,"end":298},"obj":"HP_0012125"},{"id":"T2","span":{"begin":292,"end":298},"obj":"HP_0002664"},{"id":"T3","span":{"begin":567,"end":573},"obj":"HP_0002664"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"}]},{"project":"GlycoBiology-PACDB","denotations":[{"id":"_T1","span":{"begin":1054,"end":1067},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC725"},{"id":"_T2","span":{"begin":1054,"end":1078},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC672"},{"id":"_T3","span":{"begin":1054,"end":1078},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC061"},{"id":"_T4","span":{"begin":1054,"end":1078},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC707"},{"id":"_T5","span":{"begin":1054,"end":1078},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC530"},{"id":"_T6","span":{"begin":1054,"end":1078},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC115,LEC118,LEC374,LEC408,LEC423,LEC435,LEC440,LEC557,LEC639"}],"attributes":[{"subj":"_T1","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T2","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T3","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T4","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T5","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T6","pred":"source","obj":"GlycoBiology-PACDB"}]},{"project":"ICD10","denotations":[{"id":"T1","span":{"begin":1068,"end":1078},"obj":"http://purl.bioontology.org/ontology/ICD10/J18.9"},{"id":"T2","span":{"begin":1428,"end":1438},"obj":"http://purl.bioontology.org/ontology/ICD10/J18.9"}],"attributes":[{"subj":"T1","pred":"source","obj":"ICD10"},{"subj":"T2","pred":"source","obj":"ICD10"}]},{"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":32,"end":57},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T2","span":{"begin":207,"end":232},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T3","span":{"begin":234,"end":237},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T4","span":{"begin":358,"end":361},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T5","span":{"begin":392,"end":395},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T6","span":{"begin":558,"end":561},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T7","span":{"begin":610,"end":613},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T8","span":{"begin":737,"end":740},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T9","span":{"begin":785,"end":788},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T10","span":{"begin":1147,"end":1150},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T11","span":{"begin":1700,"end":1703},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T12","span":{"begin":1864,"end":1867},"obj":"http://www.uniprot.org/uniprot/P07288"},{"id":"T13","span":{"begin":32,"end":57},"obj":"http://www.uniprot.org/uniprot/Q16305"},{"id":"T14","span":{"begin":207,"end":232},"obj":"http://www.uniprot.org/uniprot/Q16305"},{"id":"T15","span":{"begin":234,"end":237},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T16","span":{"begin":358,"end":361},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T17","span":{"begin":392,"end":395},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T18","span":{"begin":558,"end":561},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T19","span":{"begin":610,"end":613},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T20","span":{"begin":737,"end":740},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T21","span":{"begin":785,"end":788},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T22","span":{"begin":1147,"end":1150},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T23","span":{"begin":1700,"end":1703},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T24","span":{"begin":1864,"end":1867},"obj":"http://www.uniprot.org/uniprot/Q9Y617"},{"id":"T25","span":{"begin":234,"end":237},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T26","span":{"begin":358,"end":361},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T27","span":{"begin":392,"end":395},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T28","span":{"begin":558,"end":561},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T29","span":{"begin":610,"end":613},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T30","span":{"begin":737,"end":740},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T31","span":{"begin":785,"end":788},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T32","span":{"begin":1147,"end":1150},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T33","span":{"begin":1700,"end":1703},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T34","span":{"begin":1864,"end":1867},"obj":"http://www.uniprot.org/uniprot/P55786"},{"id":"T35","span":{"begin":428,"end":449},"obj":"http://www.uniprot.org/uniprot/P04217"},{"id":"T36","span":{"begin":428,"end":449},"obj":"http://www.uniprot.org/uniprot/P02743"},{"id":"T37","span":{"begin":442,"end":467},"obj":"http://www.uniprot.org/uniprot/Q6NSC9"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-human"},{"subj":"T2","pred":"source","obj":"uniprot-human"},{"subj":"T3","pred":"source","obj":"uniprot-human"},{"subj":"T4","pred":"source","obj":"uniprot-human"},{"subj":"T5","pred":"source","obj":"uniprot-human"},{"subj":"T6","pred":"source","obj":"uniprot-human"},{"subj":"T7","pred":"source","obj":"uniprot-human"},{"subj":"T8","pred":"source","obj":"uniprot-human"},{"subj":"T9","pred":"source","obj":"uniprot-human"},{"subj":"T10","pred":"source","obj":"uniprot-human"},{"subj":"T11","pred":"source","obj":"uniprot-human"},{"subj":"T12","pred":"source","obj":"uniprot-human"},{"subj":"T13","pred":"source","obj":"uniprot-human"},{"subj":"T14","pred":"source","obj":"uniprot-human"},{"subj":"T15","pred":"source","obj":"uniprot-human"},{"subj":"T16","pred":"source","obj":"uniprot-human"},{"subj":"T17","pred":"source","obj":"uniprot-human"},{"subj":"T18","pred":"source","obj":"uniprot-human"},{"subj":"T19","pred":"source","obj":"uniprot-human"},{"subj":"T20","pred":"source","obj":"uniprot-human"},{"subj":"T21","pred":"source","obj":"uniprot-human"},{"subj":"T22","pred":"source","obj":"uniprot-human"},{"subj":"T23","pred":"source","obj":"uniprot-human"},{"subj":"T24","pred":"source","obj":"uniprot-human"},{"subj":"T25","pred":"source","obj":"uniprot-human"},{"subj":"T26","pred":"source","obj":"uniprot-human"},{"subj":"T27","pred":"source","obj":"uniprot-human"},{"subj":"T28","pred":"source","obj":"uniprot-human"},{"subj":"T29","pred":"source","obj":"uniprot-human"},{"subj":"T30","pred":"source","obj":"uniprot-human"},{"subj":"T31","pred":"source","obj":"uniprot-human"},{"subj":"T32","pred":"source","obj":"uniprot-human"},{"subj":"T33","pred":"source","obj":"uniprot-human"},{"subj":"T34","pred":"source","obj":"uniprot-human"},{"subj":"T35","pred":"source","obj":"uniprot-human"},{"subj":"T36","pred":"source","obj":"uniprot-human"},{"subj":"T37","pred":"source","obj":"uniprot-human"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":234,"end":237},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T2","span":{"begin":358,"end":361},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T3","span":{"begin":392,"end":395},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T4","span":{"begin":558,"end":561},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T5","span":{"begin":610,"end":613},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T6","span":{"begin":737,"end":740},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T7","span":{"begin":785,"end":788},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T8","span":{"begin":1147,"end":1150},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T9","span":{"begin":1700,"end":1703},"obj":"http://www.uniprot.org/uniprot/Q11011"},{"id":"T10","span":{"begin":1864,"end":1867},"obj":"http://www.uniprot.org/uniprot/Q11011"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"},{"subj":"T2","pred":"source","obj":"uniprot-mouse"},{"subj":"T3","pred":"source","obj":"uniprot-mouse"},{"subj":"T4","pred":"source","obj":"uniprot-mouse"},{"subj":"T5","pred":"source","obj":"uniprot-mouse"},{"subj":"T6","pred":"source","obj":"uniprot-mouse"},{"subj":"T7","pred":"source","obj":"uniprot-mouse"},{"subj":"T8","pred":"source","obj":"uniprot-mouse"},{"subj":"T9","pred":"source","obj":"uniprot-mouse"},{"subj":"T10","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":104,"end":110},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T2","span":{"begin":292,"end":298},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T3","span":{"begin":567,"end":573},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/6754"},{"id":"T4","span":{"begin":707,"end":726},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/8004"},{"id":"T5","span":{"begin":1054,"end":1067},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/155680"},{"id":"T6","span":{"begin":1054,"end":1067},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/1301"},{"id":"T7","span":{"begin":1054,"end":1067},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/1306"},{"id":"T8","span":{"begin":1054,"end":1078},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/257758"},{"id":"T9","span":{"begin":1054,"end":1078},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/1313"},{"id":"T10","span":{"begin":1369,"end":1381},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/1663"},{"id":"T11","span":{"begin":1369,"end":1393},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/37931"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T2","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T6","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T7","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T8","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T9","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T10","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T11","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":690,"end":699},"obj":"http://purl.obolibrary.org/obo/GO_0007586"},{"id":"T2","span":{"begin":1093,"end":1102},"obj":"http://purl.obolibrary.org/obo/GO_0007586"},{"id":"T3","span":{"begin":887,"end":898},"obj":"http://purl.obolibrary.org/obo/GO_0036065"},{"id":"T4","span":{"begin":965,"end":975},"obj":"http://purl.obolibrary.org/obo/GO_0097503"},{"id":"T5","span":{"begin":1842,"end":1855},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":413,"end":440},"obj":"http://purl.obolibrary.org/obo/GO_0090665"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"}]},{"project":"UBERON-AE","denotations":[{"id":"T1","span":{"begin":119,"end":124},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"T2","span":{"begin":352,"end":357},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"T3","span":{"begin":582,"end":587},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"T4","span":{"begin":1912,"end":1917},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"T5","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"attributes":[{"subj":"T1","pred":"source","obj":"UBERON-AE"},{"subj":"T2","pred":"source","obj":"UBERON-AE"},{"subj":"T3","pred":"source","obj":"UBERON-AE"},{"subj":"T4","pred":"source","obj":"UBERON-AE"},{"subj":"T5","pred":"source","obj":"UBERON-AE"}]},{"project":"GlycoBiology-MAT","denotations":[{"id":"T1","span":{"begin":32,"end":40},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T2","span":{"begin":95,"end":103},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T3","span":{"begin":207,"end":215},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T4","span":{"begin":283,"end":291},"obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"T5","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/MAT_0000315"},{"id":"T6","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/MAT_0000083"},{"id":"T7","span":{"begin":1257,"end":1263},"obj":"http://purl.obolibrary.org/obo/MAT_0000488"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T2","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T3","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T4","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T5","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T6","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T7","pred":"source","obj":"GlycoBiology-MAT"}]},{"project":"GlycoBiology-Motifs","denotations":[{"id":"T1","span":{"begin":789,"end":798},"obj":"http://rdf.glycoinfo.org/glycan/G00027MO"},{"id":"T2","span":{"begin":1152,"end":1164},"obj":"http://rdf.glycoinfo.org/glycan/G00028MO"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-Motifs"},{"subj":"T2","pred":"source","obj":"GlycoBiology-Motifs"}]},{"project":"Lectin","denotations":[{"id":"Lectin_T1","span":{"begin":234,"end":237},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T2","span":{"begin":358,"end":361},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T3","span":{"begin":392,"end":395},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T4","span":{"begin":558,"end":561},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T5","span":{"begin":610,"end":613},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T6","span":{"begin":737,"end":740},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T7","span":{"begin":785,"end":788},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T8","span":{"begin":1147,"end":1150},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T9","span":{"begin":1700,"end":1703},"obj":"https://acgg.asia/db/lfdb/LfDB0181"},{"id":"Lectin_T10","span":{"begin":1864,"end":1867},"obj":"https://acgg.asia/db/lfdb/LfDB0181"}],"attributes":[{"subj":"Lectin_T1","pred":"source","obj":"Lectin"},{"subj":"Lectin_T2","pred":"source","obj":"Lectin"},{"subj":"Lectin_T3","pred":"source","obj":"Lectin"},{"subj":"Lectin_T4","pred":"source","obj":"Lectin"},{"subj":"Lectin_T5","pred":"source","obj":"Lectin"},{"subj":"Lectin_T6","pred":"source","obj":"Lectin"},{"subj":"Lectin_T7","pred":"source","obj":"Lectin"},{"subj":"Lectin_T8","pred":"source","obj":"Lectin"},{"subj":"Lectin_T9","pred":"source","obj":"Lectin"},{"subj":"Lectin_T10","pred":"source","obj":"Lectin"}]},{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":119,"end":124},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":352,"end":357},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":582,"end":587},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":1912,"end":1917},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"PD-UBERON-AE-B_T5","span":{"begin":478,"end":483},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T5","pred":"source","obj":"performance-test"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":95,"end":110},"obj":"Disease"},{"id":"T2","span":{"begin":283,"end":298},"obj":"Disease"},{"id":"T3","span":{"begin":567,"end":573},"obj":"Disease"},{"id":"T4","span":{"begin":1054,"end":1078},"obj":"Disease"},{"id":"T5","span":{"begin":1428,"end":1438},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0008315"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0008315"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005972"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"},{"subj":"T3","pred":"source","obj":"mondo_disease"},{"subj":"T4","pred":"source","obj":"mondo_disease"},{"subj":"T5","pred":"source","obj":"mondo_disease"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":111,"end":118},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":472,"end":477},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":574,"end":581},"obj":"OrganismTaxon"},{"id":"T4","span":{"begin":1054,"end":1078},"obj":"OrganismTaxon"},{"id":"T5","span":{"begin":1369,"end":1393},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"9606"},{"id":"A2","pred":"db_id","subj":"T2","obj":"9606"},{"id":"A3","pred":"db_id","subj":"T3","obj":"9606"},{"id":"A4","pred":"db_id","subj":"T4","obj":"1313"},{"id":"A5","pred":"db_id","subj":"T5","obj":"37931"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"},{"subj":"T3","pred":"source","obj":"NCBITAXON"},{"subj":"T4","pred":"source","obj":"NCBITAXON"},{"subj":"T5","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":32,"end":40},"obj":"Body_part"},{"id":"T2","span":{"begin":95,"end":103},"obj":"Body_part"},{"id":"T3","span":{"begin":132,"end":146},"obj":"Body_part"},{"id":"T4","span":{"begin":207,"end":215},"obj":"Body_part"},{"id":"T5","span":{"begin":283,"end":291},"obj":"Body_part"},{"id":"T6","span":{"begin":478,"end":483},"obj":"Body_part"},{"id":"T7","span":{"begin":595,"end":609},"obj":"Body_part"},{"id":"T8","span":{"begin":1132,"end":1146},"obj":"Body_part"},{"id":"T9","span":{"begin":1521,"end":1535},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0002367"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0002367"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0006530"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0002367"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0002367"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0006530"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0006530"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0006530"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T5","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T6","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T7","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T8","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T9","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":32,"end":40},"obj":"Body_part"},{"id":"T2","span":{"begin":95,"end":103},"obj":"Body_part"},{"id":"T3","span":{"begin":207,"end":215},"obj":"Body_part"},{"id":"T4","span":{"begin":283,"end":291},"obj":"Body_part"},{"id":"T5","span":{"begin":478,"end":483},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"A3","pred":"mat_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"A4","pred":"mat_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MAT_0000078"},{"id":"A5","pred":"mat_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MAT_0000083"},{"id":"A6","pred":"mat_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MAT_0000315"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"},{"subj":"T2","pred":"source","obj":"Anatomy-MAT"},{"subj":"T3","pred":"source","obj":"Anatomy-MAT"},{"subj":"T4","pred":"source","obj":"Anatomy-MAT"},{"subj":"T5","pred":"source","obj":"Anatomy-MAT"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":95,"end":110},"obj":"Phenotype"},{"id":"T2","span":{"begin":283,"end":298},"obj":"Phenotype"},{"id":"T3","span":{"begin":567,"end":573},"obj":"Phenotype"},{"id":"T4","span":{"begin":1068,"end":1078},"obj":"Phenotype"},{"id":"T5","span":{"begin":1428,"end":1438},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0012125"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0012125"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0002664"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0002090"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"HP:0002090"},{"subj":"T1","pred":"source","obj":"HP-phenotype"},{"subj":"T2","pred":"source","obj":"HP-phenotype"},{"subj":"T3","pred":"source","obj":"HP-phenotype"},{"subj":"T4","pred":"source","obj":"HP-phenotype"},{"subj":"T5","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Glycan-Motif","color":"#ecea93","default":true},{"id":"GlyCosmos6-Glycan-Motif-Image","color":"#d093ec"},{"id":"GlyCosmos6-Glycan-Motif-Structure","color":"#93ecb6"},{"id":"sentences","color":"#ec9c93"},{"id":"Glycosmos6-MAT","color":"#93a4ec"},{"id":"PubmedHPO","color":"#beec93"},{"id":"GlycoBiology-PACDB","color":"#ec93d8"},{"id":"ICD10","color":"#93ece6"},{"id":"uniprot-human","color":"#eccc93"},{"id":"uniprot-mouse","color":"#b293ec"},{"id":"GlycoBiology-NCBITAXON","color":"#93ec98"},{"id":"GO-BP","color":"#ec93a7"},{"id":"GO-CC","color":"#93c1ec"},{"id":"UBERON-AE","color":"#dbec93"},{"id":"GlycoBiology-MAT","color":"#e293ec"},{"id":"GlycoBiology-Motifs","color":"#93ecc8"},{"id":"Lectin","color":"#ecae93"},{"id":"performance-test","color":"#9493ec"},{"id":"mondo_disease","color":"#abec93"},{"id":"NCBITAXON","color":"#ec93c5"},{"id":"Anatomy-UBERON","color":"#93dfec"},{"id":"Anatomy-MAT","color":"#ecde93"},{"id":"HP-phenotype","color":"#c493ec"}]}]}}