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PubMed:16574813 / 876-1163 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T7 41-44 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T8 41-44 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T7 41-44 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T7 41-44 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T8 41-44 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 268-273 http://purl.obolibrary.org/obo/MAT_0000526 denotes colon

PubmedHPO

Id Subject Object Predicate Lexical cue
T4 268-280 HP_0003003 denotes colon cancer
T5 268-280 HP_0100273 denotes colon cancer
T6 274-280 HP_0002664 denotes cancer

uniprot-human

Id Subject Object Predicate Lexical cue
T3 192-196 http://www.uniprot.org/uniprot/P60484 denotes PTEN
T9 124-127 http://www.uniprot.org/uniprot/P38936 denotes p21
T14 128-132 http://www.uniprot.org/uniprot/P38936 denotes WAF1
T30 224-226 http://www.uniprot.org/uniprot/Q86U18 denotes PI
T35 224-226 http://www.uniprot.org/uniprot/P01298 denotes PI
T41 234-238 http://www.uniprot.org/uniprot/Q13301 denotes MDM2
T42 78-84 http://www.uniprot.org/uniprot/P12004 denotes cyclin
T45 119-122 http://www.uniprot.org/uniprot/P35790 denotes CKI

uniprot-mouse

Id Subject Object Predicate Lexical cue
T2 124-127 http://www.uniprot.org/uniprot/P63028 denotes p21
T8 124-127 http://www.uniprot.org/uniprot/Q62092 denotes p21
T14 124-127 http://www.uniprot.org/uniprot/P39689 denotes p21
T20 78-84 http://www.uniprot.org/uniprot/P17918 denotes cyclin

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T5 274-280 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T6 281-286 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T20 248-257 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T23 78-84 http://purl.obolibrary.org/obo/GO_0016538 denotes cyclin
T26 103-106 http://purl.obolibrary.org/obo/GO_0004693 denotes CDK
T27 103-117 http://purl.obolibrary.org/obo/GO_0004861 denotes CDK) inhibitor
T28 103-117 http://purl.obolibrary.org/obo/GO_0045736 denotes CDK) inhibitor

GO-CC

Id Subject Object Predicate Lexical cue
T6 281-286 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 268-273 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon

EDAM-topics

Id Subject Object Predicate Lexical cue
T13 25-30 http://edamontology.org/topic_3678 denotes study
T14 177-184 http://edamontology.org/topic_0078 denotes protein
T15 274-280 http://edamontology.org/topic_2640 denotes cancer

EDAM-DFO

Id Subject Object Predicate Lexical cue
T4 177-184 http://edamontology.org/format_1208 denotes protein
T5 177-184 http://edamontology.org/data_1467 denotes protein

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16574813-4#78#84#gene5111 78-84 gene5111 denotes cyclin
16574813-4#128#132#gene1026 128-132 gene1026 denotes WAF1
16574813-4#234#238#gene4193 234-238 gene4193 denotes MDM2
16574813-4#268#280#diseaseC0007102 268-280 diseaseC0007102 denotes colon cancer
16574813-4#268#280#diseaseC0699790 268-280 diseaseC0699790 denotes colon cancer
16574813-4#268#280#diseaseC0007102 268-280 diseaseC0007102 denotes colon cancer
16574813-4#268#280#diseaseC0699790 268-280 diseaseC0699790 denotes colon cancer
16574813-4#268#280#diseaseC0007102 268-280 diseaseC0007102 denotes colon cancer
16574813-4#268#280#diseaseC0699790 268-280 diseaseC0699790 denotes colon cancer
78#84#gene5111268#280#diseaseC0007102 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0007102 associated_with cyclin,colon cancer
78#84#gene5111268#280#diseaseC0699790 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0699790 associated_with cyclin,colon cancer
78#84#gene5111268#280#diseaseC0007102 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0007102 associated_with cyclin,colon cancer
78#84#gene5111268#280#diseaseC0699790 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0699790 associated_with cyclin,colon cancer
78#84#gene5111268#280#diseaseC0007102 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0007102 associated_with cyclin,colon cancer
78#84#gene5111268#280#diseaseC0699790 16574813-4#78#84#gene5111 16574813-4#268#280#diseaseC0699790 associated_with cyclin,colon cancer
128#132#gene1026268#280#diseaseC0007102 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0007102 associated_with WAF1,colon cancer
128#132#gene1026268#280#diseaseC0699790 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0699790 associated_with WAF1,colon cancer
128#132#gene1026268#280#diseaseC0007102 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0007102 associated_with WAF1,colon cancer
128#132#gene1026268#280#diseaseC0699790 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0699790 associated_with WAF1,colon cancer
128#132#gene1026268#280#diseaseC0007102 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0007102 associated_with WAF1,colon cancer
128#132#gene1026268#280#diseaseC0699790 16574813-4#128#132#gene1026 16574813-4#268#280#diseaseC0699790 associated_with WAF1,colon cancer
234#238#gene4193268#280#diseaseC0007102 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0007102 associated_with MDM2,colon cancer
234#238#gene4193268#280#diseaseC0699790 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0699790 associated_with MDM2,colon cancer
234#238#gene4193268#280#diseaseC0007102 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0007102 associated_with MDM2,colon cancer
234#238#gene4193268#280#diseaseC0699790 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0699790 associated_with MDM2,colon cancer
234#238#gene4193268#280#diseaseC0007102 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0007102 associated_with MDM2,colon cancer
234#238#gene4193268#280#diseaseC0699790 16574813-4#234#238#gene4193 16574813-4#268#280#diseaseC0699790 associated_with MDM2,colon cancer

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 268-273 http://purl.obolibrary.org/obo/MAT_0000526 denotes colon

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.
T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.
T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 268-273 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 268-273 Body_part denotes colon http://purl.obolibrary.org/obo/MAT_0000526

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T5 268-280 Disease denotes colon cancer http://purl.obolibrary.org/obo/MONDO_0021063

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T4 41-44 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T5 268-280 Phenotype denotes colon cancer HP:0003003

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 268-280 Disease denotes colon cancer http://purl.obolibrary.org/obo/MONDO_0021063

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T2 274-286 Cell denotes cancer cells http://purl.obolibrary.org/obo/CL:0001064

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 268-273 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 268-273 Body_part denotes colon http://purl.obolibrary.org/obo/MAT_0000526

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.
T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.
T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T5 0-287 Sentence denotes Results from our current study show that GM3 treatment dramatically increases cyclin-dependent kinase (CDK) inhibitor (CKI) p21(WAF1) expression through the accumulation of p53 protein by the PTEN-mediated inhibition of the PI-3K/AKT/MDM2 survival signaling in HCT116 colon cancer cells.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T4 41-44 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 268-273 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T5 268-280 Phenotype denotes colon cancer HP:0003003

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T2 274-286 Cell denotes cancer cells http://purl.obolibrary.org/obo/CL:0001064