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PubMed:16252083 JSONTXT

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PubTator4TogoVar

Id Subject Object Predicate Lexical cue proteinmutation
16252083_0 722-759 ProteinMutation denotes Asn --> Ser substitution at codon 127 rs17217772
16252083_1 846-877 ProteinMutation denotes Gly --> Asp change at codon 322 rs4987188
16252083_2 1385-1392 ProteinMutation denotes Gly/Gly rs4987188

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-95 Sentence denotes Polymorphisms of the DNA mismatch repair gene HMSH2 in breast cancer occurence and progression.
T2 96-255 Sentence denotes The response of the cell to DNA damage and its ability to maintain genomic stability by DNA repair are crucial in preventing cancer initiation and progression.
T3 256-341 Sentence denotes Therefore, polymorphism of DNA repair genes may affect the process of carcinogenesis.
T4 342-567 Sentence denotes The importance of genetic variability of the components of mismatch repair (MMR) genes is well documented in colorectal cancer, but little is known about its role in breast cancer. hMSH2 is one of the crucial proteins of MMR.
T5 568-953 Sentence denotes We performed a case-control study to test the association between two polymorphisms in the hMSH2 gene: an A --> G transition at 127 position producing an Asn --> Ser substitution at codon 127 (the Asn127Ser polymorphism) and a G --> A transition at 1032 position resulting in a Gly --> Asp change at codon 322 (the Gly322Asp polymorphism) and breast cancer risk and cancer progression.
T6 954-1156 Sentence denotes Genotypes were determined in DNA from peripheral blood lymphocytes of 150 breast cancer patients and 150 age-matched women (controls) by restriction fragment length polymorphism and allele-specific PCR.
T7 1157-1322 Sentence denotes We did not observe any correlation between studied polymorphisms and breast cancer progression evaluated by node-metastasis, tumor size and Bloom-Richardson grading.
T8 1323-1496 Sentence denotes A strong association between breast cancer occurrence and the Gly/Gly phenotype of the Gly322Asp polymorphism (odds ratio 8.39; 95% confidence interval 1.44-48.8) was found.
T9 1497-1663 Sentence denotes Therefore, MMR may play a role in the breast carcinogenesis and the Gly322Asp polymorphism of the hMSH2 gene may be considered as a potential marker in breast cancer.

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 750-755 OrganismTaxon denotes codon NCBItxid:79338
T2 868-873 OrganismTaxon denotes codon NCBItxid:79338

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
2434 25-40 GeneOrGeneProduct denotes mismatch repair NCBIGene:4436
2435 46-51 GeneOrGeneProduct denotes HMSH2 NCBIGene:4436
2436 55-68 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2437 221-238 DiseaseOrPhenotypicFeature denotes cancer initiation MESH:D009369
2438 326-340 DiseaseOrPhenotypicFeature denotes carcinogenesis MESH:D063646
2439 401-416 GeneOrGeneProduct denotes mismatch repair NCBIGene:4436
2440 418-421 GeneOrGeneProduct denotes MMR NCBIGene:4436
2441 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer MESH:D015179
2442 508-521 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2443 523-528 GeneOrGeneProduct denotes hMSH2 NCBIGene:4436
2444 563-566 GeneOrGeneProduct denotes MMR NCBIGene:4436
2445 659-664 GeneOrGeneProduct denotes hMSH2 NCBIGene:4436
2446 674-708 SequenceVariant denotes A --> G transition at 127 position DBSNP:rs17217772
2447 722-759 SequenceVariant denotes Asn --> Ser substitution at codon 127 DBSNP:rs17217772
2448 765-774 SequenceVariant denotes Asn127Ser DBSNP:rs17217772
2449 795-830 SequenceVariant denotes G --> A transition at 1032 position DBSNP:rs4987188
2450 846-877 SequenceVariant denotes Gly --> Asp change at codon 322 DBSNP:rs4987188
2451 883-892 SequenceVariant denotes Gly322Asp DBSNP:rs4987188
2452 911-924 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2453 934-940 DiseaseOrPhenotypicFeature denotes cancer MESH:D009369
2454 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2455 1042-1050 OrganismTaxon denotes patients NCBITaxon:9606
2456 1071-1076 OrganismTaxon denotes women NCBITaxon:9606
2457 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2458 1282-1287 DiseaseOrPhenotypicFeature denotes tumor MESH:D009369
2459 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943
2460 1410-1419 SequenceVariant denotes Gly322Asp DBSNP:rs4987188
2461 1508-1511 GeneOrGeneProduct denotes MMR NCBIGene:4436
2462 1535-1556 DiseaseOrPhenotypicFeature denotes breast carcinogenesis MESH:D001943
2463 1565-1574 SequenceVariant denotes Gly322Asp DBSNP:rs4987188
2464 1595-1600 GeneOrGeneProduct denotes hMSH2 NCBIGene:4436
2465 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer MESH:D001943

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 55-68 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T2 62-68 DiseaseOrPhenotypicFeature denotes cancer 0004992
T3 221-227 DiseaseOrPhenotypicFeature denotes cancer 0004992
T4 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer 0005575
T5 462-468 DiseaseOrPhenotypicFeature denotes cancer 0004992
T6 508-521 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T7 515-521 DiseaseOrPhenotypicFeature denotes cancer 0004992
T8 911-924 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T9 918-924 DiseaseOrPhenotypicFeature denotes cancer 0004992
T10 934-940 DiseaseOrPhenotypicFeature denotes cancer 0004992
T11 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T12 1035-1041 DiseaseOrPhenotypicFeature denotes cancer 0004992
T13 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T14 1233-1239 DiseaseOrPhenotypicFeature denotes cancer 0004992
T15 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T16 1359-1365 DiseaseOrPhenotypicFeature denotes cancer 0004992
T17 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer 0007254
T18 1656-1662 DiseaseOrPhenotypicFeature denotes cancer 0004992

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 765-774 SequenceVariant denotes Asn127Ser
T2 883-892 SequenceVariant denotes Gly322Asp
T3 1410-1419 SequenceVariant denotes Gly322Asp
T4 1565-1574 SequenceVariant denotes Gly322Asp

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 21-40 GeneOrGeneProduct denotes DNA mismatch repair
T2 46-51 GeneOrGeneProduct denotes HMSH2
T3 116-120 GeneOrGeneProduct denotes cell
T4 128-134 GeneOrGeneProduct denotes damage
T5 184-194 GeneOrGeneProduct denotes DNA repair
T6 228-238 GeneOrGeneProduct denotes initiation
T7 283-293 GeneOrGeneProduct denotes DNA repair
T8 315-322 GeneOrGeneProduct denotes process
T9 474-480 GeneOrGeneProduct denotes little
T10 523-528 GeneOrGeneProduct denotes hMSH2
T11 551-559 GeneOrGeneProduct denotes proteins
T12 583-587 GeneOrGeneProduct denotes case
T13 605-609 GeneOrGeneProduct denotes test
T14 659-664 GeneOrGeneProduct denotes hMSH2
T15 671-681 GeneOrGeneProduct denotes an A --> G
T16 722-725 GeneOrGeneProduct denotes Asn
T17 730-733 GeneOrGeneProduct denotes Ser
T18 841-845 GeneOrGeneProduct denotes in a
T19 969-979 GeneOrGeneProduct denotes determined
T20 1009-1020 GeneOrGeneProduct denotes lymphocytes
T21 1265-1269 GeneOrGeneProduct denotes node
T22 1282-1287 GeneOrGeneProduct denotes tumor
T23 1288-1292 GeneOrGeneProduct denotes size
T24 1297-1302 GeneOrGeneProduct denotes Bloom
T25 1595-1600 GeneOrGeneProduct denotes hMSH2

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 21-40 GeneOrGeneProduct denotes DNA mismatch repair
T2 46-51 GeneOrGeneProduct denotes HMSH2
T3 116-120 GeneOrGeneProduct denotes cell
T4 184-194 GeneOrGeneProduct denotes DNA repair
T5 283-293 GeneOrGeneProduct denotes DNA repair
T6 474-480 GeneOrGeneProduct denotes little
T7 523-528 GeneOrGeneProduct denotes hMSH2
T8 659-664 GeneOrGeneProduct denotes hMSH2
T9 1009-1020 GeneOrGeneProduct denotes lymphocytes
T10 1297-1302 GeneOrGeneProduct denotes Bloom
T11 1595-1600 GeneOrGeneProduct denotes hMSH2

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 55-68 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T2 163-180 DiseaseOrPhenotypicFeature denotes genomic stability D042822
T3 221-227 DiseaseOrPhenotypicFeature denotes cancer D009369
T4 326-340 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T5 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer D015179
T6 508-521 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T7 911-924 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T8 934-940 DiseaseOrPhenotypicFeature denotes cancer D009369
T9 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T10 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T11 1270-1280 DiseaseOrPhenotypicFeature denotes metastasis D009362
T12 1282-1287 DiseaseOrPhenotypicFeature denotes tumor D009369
T13 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T14 1542-1556 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T15 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer D001943

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 21-40 GeneOrGeneProduct denotes DNA mismatch repair
T2 46-51 GeneOrGeneProduct denotes HMSH2
T3 523-528 GeneOrGeneProduct denotes hMSH2
T4 659-664 GeneOrGeneProduct denotes hMSH2
T5 1297-1302 GeneOrGeneProduct denotes Bloom
T6 1595-1600 GeneOrGeneProduct denotes hMSH2

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 55-68 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T3 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer 0024331|0005575
T5 508-521 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T7 911-924 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T9 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T11 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T13 1282-1287 DiseaseOrPhenotypicFeature denotes tumor 0005070
T14 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989
T16 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer 0007254|0004989

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 55-68 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T2 163-180 DiseaseOrPhenotypicFeature denotes genomic stability D042822
T3 221-227 DiseaseOrPhenotypicFeature denotes cancer D009369
T4 326-340 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T5 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer D015179
T6 508-521 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T7 911-924 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T8 934-940 DiseaseOrPhenotypicFeature denotes cancer D009369
T9 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T10 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T11 1270-1280 DiseaseOrPhenotypicFeature denotes metastasis D009362
T12 1282-1287 DiseaseOrPhenotypicFeature denotes tumor D009369
T13 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T14 1542-1556 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T15 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer D001943

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 55-68 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T2 163-180 DiseaseOrPhenotypicFeature denotes genomic stability D042822
T3 221-227 DiseaseOrPhenotypicFeature denotes cancer D009369
T4 326-340 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T5 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer D015179
T6 508-521 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T7 911-924 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T8 934-940 DiseaseOrPhenotypicFeature denotes cancer D009369
T9 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T10 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T11 1282-1287 DiseaseOrPhenotypicFeature denotes tumor D009369
T12 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T13 1542-1556 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T14 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer D001943

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 1042-1050 OrganismTaxon denotes patients
T2 1071-1076 OrganismTaxon denotes women

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 722-725 ChemicalEntity denotes Asn http://purl.obolibrary.org/obo/CHEBI_50347|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_17196
T4 730-733 ChemicalEntity denotes Ser http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17115
T6 846-849 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T7 854-857 ChemicalEntity denotes Asp http://purl.obolibrary.org/obo/CHEBI_29958|http://purl.obolibrary.org/obo/CHEBI_22660|http://purl.obolibrary.org/obo/CHEBI_17053
T10 1385-1388 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T11 1389-1392 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T11 1389-1392 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T10 1385-1388 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T7 854-857 ChemicalEntity denotes Asp http://purl.obolibrary.org/obo/CHEBI_17053|http://purl.obolibrary.org/obo/CHEBI_22660|http://purl.obolibrary.org/obo/CHEBI_29958
T6 846-849 ChemicalEntity denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T4 730-733 ChemicalEntity denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T1 722-725 ChemicalEntity denotes Asn http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347
T60117 1595-1600 GeneOrGeneProduct denotes hMSH2
T5 1297-1302 GeneOrGeneProduct denotes Bloom
T37804 659-664 GeneOrGeneProduct denotes hMSH2
T3 523-528 GeneOrGeneProduct denotes hMSH2
T2 46-51 GeneOrGeneProduct denotes HMSH2
T15107 21-40 GeneOrGeneProduct denotes DNA mismatch repair
T14 1649-1662 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T13 1542-1556 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T12 1352-1365 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T70260 1282-1287 DiseaseOrPhenotypicFeature denotes tumor D009369
T95228 1226-1239 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T9 1028-1041 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T8 934-940 DiseaseOrPhenotypicFeature denotes cancer D009369
T26934 911-924 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T83118 508-521 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T64134 451-468 DiseaseOrPhenotypicFeature denotes colorectal cancer D015179
T3305 326-340 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T23407 221-227 DiseaseOrPhenotypicFeature denotes cancer D009369
T54787 163-180 DiseaseOrPhenotypicFeature denotes genomic stability D042822
T78331 55-68 DiseaseOrPhenotypicFeature denotes breast cancer D001943
T66454 1071-1076 OrganismTaxon denotes women
T82406 1042-1050 OrganismTaxon denotes patients
T79477 1565-1574 SequenceVariant denotes Gly322Asp
T33166 1410-1419 SequenceVariant denotes Gly322Asp
T5825 883-892 SequenceVariant denotes Gly322Asp
T64918 765-774 SequenceVariant denotes Asn127Ser

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
16252083-4#315#324#geners4987188 883-892 geners4987188 denotes Gly322Asp
16252083-4#197#206#geners17217772 765-774 geners17217772 denotes Asn127Ser
16252083-4#366#384#diseaseC0178874 934-952 diseaseC0178874 denotes cancer progression
16252083-4#343#356#diseaseC0006142 911-924 diseaseC0006142 denotes breast cancer
16252083-4#343#356#diseaseC0678222 911-924 diseaseC0678222 denotes breast cancer
16252083-4#366#384#diseaseC0178874 934-952 diseaseC0178874 denotes cancer progression
16252083-8#68#77#geners4987188 1565-1574 geners4987188 denotes Gly322Asp
16252083-8#45#59#diseaseC0596263 1542-1556 diseaseC0596263 denotes carcinogenesis
16252083-8#152#165#diseaseC0006142 1649-1662 diseaseC0006142 denotes breast cancer
16252083-8#152#165#diseaseC0678222 1649-1662 diseaseC0678222 denotes breast cancer
315#324#geners4987188366#384#diseaseC0178874 16252083-4#315#324#geners4987188 16252083-4#366#384#diseaseC0178874 associated_with Gly322Asp,cancer progression
315#324#geners4987188343#356#diseaseC0006142 16252083-4#315#324#geners4987188 16252083-4#343#356#diseaseC0006142 associated_with Gly322Asp,breast cancer
315#324#geners4987188343#356#diseaseC0678222 16252083-4#315#324#geners4987188 16252083-4#343#356#diseaseC0678222 associated_with Gly322Asp,breast cancer
315#324#geners4987188366#384#diseaseC0178874 16252083-4#315#324#geners4987188 16252083-4#366#384#diseaseC0178874 associated_with Gly322Asp,cancer progression
197#206#geners17217772366#384#diseaseC0178874 16252083-4#197#206#geners17217772 16252083-4#366#384#diseaseC0178874 associated_with Asn127Ser,cancer progression
197#206#geners17217772343#356#diseaseC0006142 16252083-4#197#206#geners17217772 16252083-4#343#356#diseaseC0006142 associated_with Asn127Ser,breast cancer
197#206#geners17217772343#356#diseaseC0678222 16252083-4#197#206#geners17217772 16252083-4#343#356#diseaseC0678222 associated_with Asn127Ser,breast cancer
197#206#geners17217772366#384#diseaseC0178874 16252083-4#197#206#geners17217772 16252083-4#366#384#diseaseC0178874 associated_with Asn127Ser,cancer progression
68#77#geners498718845#59#diseaseC0596263 16252083-8#68#77#geners4987188 16252083-8#45#59#diseaseC0596263 associated_with Gly322Asp,carcinogenesis
68#77#geners4987188152#165#diseaseC0006142 16252083-8#68#77#geners4987188 16252083-8#152#165#diseaseC0006142 associated_with Gly322Asp,breast cancer
68#77#geners4987188152#165#diseaseC0678222 16252083-8#68#77#geners4987188 16252083-8#152#165#diseaseC0678222 associated_with Gly322Asp,breast cancer

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16252083-0#46#51#gene4436 46-51 gene4436 denotes HMSH2
16252083-0#55#68#diseaseC0006142 55-68 diseaseC0006142 denotes breast cancer
16252083-0#55#68#diseaseC0678222 55-68 diseaseC0678222 denotes breast cancer
16252083-3#76#79#gene4360 418-421 gene4360 denotes MMR
16252083-3#109#126#diseaseC0009402 451-468 diseaseC0009402 denotes colorectal cancer
16252083-3#109#126#diseaseC1527249 451-468 diseaseC1527249 denotes colorectal cancer
16252083-3#166#179#diseaseC0006142 508-521 diseaseC0006142 denotes breast cancer
16252083-3#166#179#diseaseC0678222 508-521 diseaseC0678222 denotes breast cancer
16252083-4#91#96#gene4436 659-664 gene4436 denotes hMSH2
16252083-4#366#384#diseaseC0178874 934-952 diseaseC0178874 denotes cancer progression
16252083-8#98#103#gene4436 1595-1600 gene4436 denotes hMSH2
16252083-8#45#59#diseaseC0596263 1542-1556 diseaseC0596263 denotes carcinogenesis
46#51#gene443655#68#diseaseC0006142 16252083-0#46#51#gene4436 16252083-0#55#68#diseaseC0006142 associated_with HMSH2,breast cancer
46#51#gene443655#68#diseaseC0678222 16252083-0#46#51#gene4436 16252083-0#55#68#diseaseC0678222 associated_with HMSH2,breast cancer
76#79#gene4360109#126#diseaseC0009402 16252083-3#76#79#gene4360 16252083-3#109#126#diseaseC0009402 associated_with MMR,colorectal cancer
76#79#gene4360109#126#diseaseC1527249 16252083-3#76#79#gene4360 16252083-3#109#126#diseaseC1527249 associated_with MMR,colorectal cancer
76#79#gene4360166#179#diseaseC0006142 16252083-3#76#79#gene4360 16252083-3#166#179#diseaseC0006142 associated_with MMR,breast cancer
76#79#gene4360166#179#diseaseC0678222 16252083-3#76#79#gene4360 16252083-3#166#179#diseaseC0678222 associated_with MMR,breast cancer
91#96#gene4436366#384#diseaseC0178874 16252083-4#91#96#gene4436 16252083-4#366#384#diseaseC0178874 associated_with hMSH2,cancer progression
98#103#gene443645#59#diseaseC0596263 16252083-8#98#103#gene4436 16252083-8#45#59#diseaseC0596263 associated_with hMSH2,carcinogenesis

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 674-708 DNAMutation:|SUB|A|CODON127|G denotes A --> G transition at 127 position
T2 722-759 ProteinMutation:p|SUB|N|127|S denotes Asn --> Ser substitution at codon 127
T3 765-774 ProteinMutation:p|SUB|N|127|S denotes Asn127Ser
T4 795-830 DNAMutation:g|SUB|G|1032|A denotes G --> A transition at 1032 position
T5 846-877 ProteinMutation:p|SUB|G|322|D denotes Gly --> Asp change at codon 322
T6 883-892 ProteinMutation:p|SUB|G|322|D denotes Gly322Asp
T7 1410-1419 ProteinMutation:p|SUB|G|322|D denotes Gly322Asp
T8 1565-1574 ProteinMutation:p|SUB|G|322|D denotes Gly322Asp

DisGeNET

Id Subject Object Predicate Lexical cue
T0 1595-1600 gene:4436 denotes hMSH2
T1 1649-1662 disease:C0006142 denotes breast cancer
T2 1595-1600 gene:4436 denotes hMSH2
T3 1649-1662 disease:C0678222 denotes breast cancer
R1 T0 T1 associated_with hMSH2,breast cancer
R2 T2 T3 associated_with hMSH2,breast cancer