PubMed:16120104 / 0-337
Annnotations
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":119},"obj":"Sentence"},{"id":"T2","span":{"begin":120,"end":234},"obj":"Sentence"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-entities-OrganismTaxon-PD
{"project":"LitCoin-entities-OrganismTaxon-PD","denotations":[{"id":"T1","span":{"begin":226,"end":233},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":262,"end":267},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"NCBItxid:40674"},{"id":"A2","pred":"db_id","subj":"T2","obj":"NCBItxid:9606"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"2208","span":{"begin":70,"end":75},"obj":"GeneOrGeneProduct"},{"id":"2209","span":{"begin":124,"end":131},"obj":"GeneOrGeneProduct"},{"id":"2210","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"2211","span":{"begin":262,"end":267},"obj":"OrganismTaxon"},{"id":"2212","span":{"begin":268,"end":272},"obj":"GeneOrGeneProduct"},{"id":"2213","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"db_id","subj":"2208","obj":"NCBIGene:8864"},{"id":"A2","pred":"db_id","subj":"2209","obj":"NCBIGene:8864"},{"id":"A3","pred":"db_id","subj":"2210","obj":"NCBIGene:8864"},{"id":"A4","pred":"db_id","subj":"2211","obj":"NCBITaxon:9606"},{"id":"A5","pred":"db_id","subj":"2212","obj":"NCBIGene:8864"},{"id":"A6","pred":"db_id","subj":"2213","obj":"MESH:C565789"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin_Mondo
{"project":"LitCoin_Mondo","denotations":[{"id":"T1","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0015609"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T1","span":{"begin":70,"end":75},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":124,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":139,"end":148},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":205,"end":222},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":237,"end":245},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":246,"end":254},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":268,"end":272},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":298,"end":304},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":329,"end":337},"obj":"GeneOrGeneProduct"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T1","span":{"begin":70,"end":75},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":124,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":205,"end":222},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":268,"end":272},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":329,"end":337},"obj":"GeneOrGeneProduct"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-Disease-MeSH
{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T1","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"originalLabel","subj":"T1","obj":"D020178"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-GeneOrGeneProduct-v3
{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T1","span":{"begin":70,"end":75},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":124,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":205,"end":222},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":268,"end":272},"obj":"GeneOrGeneProduct"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin_Mondo_095
{"project":"LitCoin_Mondo_095","denotations":[{"id":"T1","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0024378"},{"id":"A2","pred":"mondo_id","subj":"T1","obj":"0015609"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-MeSH-Disease-2
{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T1","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"D020178"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-MONDO_bioort2019
{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T1","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"#label","subj":"T1","obj":"D020178"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-NCBITaxon-2
{"project":"LitCoin-NCBITaxon-2","denotations":[{"id":"T1","span":{"begin":226,"end":233},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":262,"end":267},"obj":"OrganismTaxon"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T5","span":{"begin":268,"end":272},"obj":"GeneOrGeneProduct"},{"id":"T25698","span":{"begin":205,"end":222},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":133,"end":137},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":124,"end":131},"obj":"GeneOrGeneProduct"},{"id":"T86221","span":{"begin":70,"end":75},"obj":"GeneOrGeneProduct"},{"id":"T79345","span":{"begin":308,"end":337},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T59788","span":{"begin":262,"end":267},"obj":"OrganismTaxon"},{"id":"T34722","span":{"begin":226,"end":233},"obj":"OrganismTaxon"}],"attributes":[{"id":"A11374","pred":"#label","subj":"T79345","obj":"D020178"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
DisGeNET5_gene_disease
{"project":"DisGeNET5_gene_disease","denotations":[{"id":"16120104-2#33#37#gene8864","span":{"begin":268,"end":272},"obj":"gene8864"},{"id":"16120104-2#73#102#diseaseC0751758","span":{"begin":308,"end":337},"obj":"diseaseC0751758"}],"relations":[{"id":"33#37#gene886473#102#diseaseC0751758","pred":"associated_with","subj":"16120104-2#33#37#gene8864","obj":"16120104-2#73#102#diseaseC0751758"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}
DisGeNET
{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":268,"end":272},"obj":"gene:8864"},{"id":"T1","span":{"begin":308,"end":337},"obj":"disease:C0751758"},{"id":"T2","span":{"begin":268,"end":272},"obj":"gene:8864"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"text":"A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference.\nThe PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. A missense mutation in the human PER2 gene has previously been linked to advanced sleep phase syndrome"}