PubMed:16120104 / 0-337
Annnotations
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-119 | Sentence | denotes | A single-nucleotide polymorphism in the 5'-untranslated region of the hPER2 gene is associated with diurnal preference. |
| T2 | 120-234 | Sentence | denotes | The PERIOD2 (PER2) gene is a key component of the molecular mechanism that generates circadian rhythms in mammals. |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 226-233 | OrganismTaxon | denotes | mammals | NCBItxid:40674 |
| T2 | 262-267 | OrganismTaxon | denotes | human | NCBItxid:9606 |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 2208 | 70-75 | GeneOrGeneProduct | denotes | hPER2 | NCBIGene:8864 |
| 2209 | 124-131 | GeneOrGeneProduct | denotes | PERIOD2 | NCBIGene:8864 |
| 2210 | 133-137 | GeneOrGeneProduct | denotes | PER2 | NCBIGene:8864 |
| 2211 | 262-267 | OrganismTaxon | denotes | human | NCBITaxon:9606 |
| 2212 | 268-272 | GeneOrGeneProduct | denotes | PER2 | NCBIGene:8864 |
| 2213 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | MESH:C565789 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | 0015609 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 70-75 | GeneOrGeneProduct | denotes | hPER2 |
| T2 | 124-131 | GeneOrGeneProduct | denotes | PERIOD2 |
| T3 | 133-137 | GeneOrGeneProduct | denotes | PER2 |
| T4 | 139-148 | GeneOrGeneProduct | denotes | gene is a |
| T5 | 205-222 | GeneOrGeneProduct | denotes | circadian rhythms |
| T6 | 237-245 | GeneOrGeneProduct | denotes | missense |
| T7 | 246-254 | GeneOrGeneProduct | denotes | mutation |
| T8 | 268-272 | GeneOrGeneProduct | denotes | PER2 |
| T9 | 298-304 | GeneOrGeneProduct | denotes | linked |
| T10 | 329-337 | GeneOrGeneProduct | denotes | syndrome |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 70-75 | GeneOrGeneProduct | denotes | hPER2 |
| T2 | 124-131 | GeneOrGeneProduct | denotes | PERIOD2 |
| T3 | 133-137 | GeneOrGeneProduct | denotes | PER2 |
| T4 | 205-222 | GeneOrGeneProduct | denotes | circadian rhythms |
| T5 | 268-272 | GeneOrGeneProduct | denotes | PER2 |
| T6 | 329-337 | GeneOrGeneProduct | denotes | syndrome |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T1 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | D020178 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 70-75 | GeneOrGeneProduct | denotes | hPER2 |
| T2 | 124-131 | GeneOrGeneProduct | denotes | PERIOD2 |
| T3 | 133-137 | GeneOrGeneProduct | denotes | PER2 |
| T4 | 205-222 | GeneOrGeneProduct | denotes | circadian rhythms |
| T5 | 268-272 | GeneOrGeneProduct | denotes | PER2 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | 0024378|0015609 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | D020178 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | D020178 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 226-233 | OrganismTaxon | denotes | mammals |
| T2 | 262-267 | OrganismTaxon | denotes | human |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T5 | 268-272 | GeneOrGeneProduct | denotes | PER2 | |
| T25698 | 205-222 | GeneOrGeneProduct | denotes | circadian rhythms | |
| T3 | 133-137 | GeneOrGeneProduct | denotes | PER2 | |
| T2 | 124-131 | GeneOrGeneProduct | denotes | PERIOD2 | |
| T86221 | 70-75 | GeneOrGeneProduct | denotes | hPER2 | |
| T79345 | 308-337 | DiseaseOrPhenotypicFeature | denotes | advanced sleep phase syndrome | D020178 |
| T59788 | 262-267 | OrganismTaxon | denotes | human | |
| T34722 | 226-233 | OrganismTaxon | denotes | mammals |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 16120104-2#33#37#gene8864 | 268-272 | gene8864 | denotes | PER2 |
| 16120104-2#73#102#diseaseC0751758 | 308-337 | diseaseC0751758 | denotes | advanced sleep phase syndrome |
| 33#37#gene886473#102#diseaseC0751758 | 16120104-2#33#37#gene8864 | 16120104-2#73#102#diseaseC0751758 | associated_with | PER2,advanced sleep phase syndrome |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 268-272 | gene:8864 | denotes | PER2 |
| T1 | 308-337 | disease:C0751758 | denotes | advanced sleep phase syndrome |
| T2 | 268-272 | gene:8864 | denotes | PER2 |
| R1 | T0 | T1 | associated_with | PER2,advanced sleep phase syndrome |