PubMed:15917430
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/15917430","sourcedb":"PubMed","sourceid":"15917430","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/15917430","text":"Concanavalin A binding to HIV envelope protein is less sensitive to mutations in glycosylation sites than monoclonal antibody 2G12.\nMany mannose-binding proteins inhibit divergent strains of human immunodeficiency virus type 1 (HIV-1) in in vitro models of viral infectivity, suggesting that targeting mannose residues in vaccine applications might offset the strain restriction typically observed in antibody responses to HIV vaccine preparations. Concanavalin A (ConA) behaves like neutralizing antibodies that do not interfere with CD4 binding of gp120 but rather with later events in virus entry. The design of mannose-based vaccines, therefore, depends on understanding the mode of binding of ConA to the envelope protein in comparison with other mannose-binding proteins. Here, we further compare the binding affinity and fine specificity of ConA for the envelope protein to that of the human antibody 2G12. The 2G12 antibody is of unusual structure recognizing a cluster of 12 linked mannose residues associated with Man9GlcNAc2. Molecular structure comparison for Man9GlcNAc2 recognition by ConA and 2G12 indicates that 2G12 has a more restricted specificity to high mannose glycans of gp120 which correlates with kinetic analysis assessed by surface plasmon resonance (SPR) and ConA inhibits 2G12 binding to gp120 but 2G12 does not inhibit ConA binding to gp120. ConA binding to Env proteins from four different HIV strains proves significantly less sensitive to mutations in the glycosylation sites than 2G12 binding to the proteins. Thus, antibodies directed toward mannose epitopes reactive with ConA may prove to be more effective in the long run to thwart HIV infection and transmission.","tracks":[{"project":"Glycan-Motif","denotations":[{"id":"T1","span":{"begin":137,"end":144},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T2","span":{"begin":302,"end":309},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T3","span":{"begin":615,"end":622},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T4","span":{"begin":752,"end":759},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T5","span":{"begin":991,"end":998},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T6","span":{"begin":1175,"end":1182},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T7","span":{"begin":1577,"end":1584},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycan-Motif"},{"subj":"T2","pred":"source","obj":"Glycan-Motif"},{"subj":"T3","pred":"source","obj":"Glycan-Motif"},{"subj":"T4","pred":"source","obj":"Glycan-Motif"},{"subj":"T5","pred":"source","obj":"Glycan-Motif"},{"subj":"T6","pred":"source","obj":"Glycan-Motif"},{"subj":"T7","pred":"source","obj":"Glycan-Motif"}]},{"project":"GlyCosmos6-Glycan-Motif-Image","denotations":[{"id":"T1","span":{"begin":137,"end":144},"obj":"Glycan_Motif"},{"id":"T2","span":{"begin":302,"end":309},"obj":"Glycan_Motif"},{"id":"T3","span":{"begin":615,"end":622},"obj":"Glycan_Motif"},{"id":"T4","span":{"begin":752,"end":759},"obj":"Glycan_Motif"},{"id":"T5","span":{"begin":991,"end":998},"obj":"Glycan_Motif"},{"id":"T6","span":{"begin":1175,"end":1182},"obj":"Glycan_Motif"},{"id":"T7","span":{"begin":1577,"end":1584},"obj":"Glycan_Motif"}],"attributes":[{"id":"A1","pred":"image","subj":"T1","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A2","pred":"image","subj":"T2","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A3","pred":"image","subj":"T3","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A4","pred":"image","subj":"T4","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A5","pred":"image","subj":"T5","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A6","pred":"image","subj":"T6","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"id":"A7","pred":"image","subj":"T7","obj":"https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ"},{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T3","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T4","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T5","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T6","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"},{"subj":"T7","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Image"}]},{"project":"GlyCosmos6-Glycan-Motif-Structure","denotations":[{"id":"T1","span":{"begin":137,"end":144},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T2","span":{"begin":302,"end":309},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T3","span":{"begin":615,"end":622},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T4","span":{"begin":752,"end":759},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T5","span":{"begin":991,"end":998},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T6","span":{"begin":1175,"end":1182},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"},{"id":"T7","span":{"begin":1577,"end":1584},"obj":"https://glytoucan.org/Structures/Glycans/G70323CJ"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T2","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T3","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T4","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T5","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T6","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"},{"subj":"T7","pred":"source","obj":"GlyCosmos6-Glycan-Motif-Structure"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":572,"end":577},"obj":"http://purl.obolibrary.org/obo/MAT_0000488"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"GlycoBiology-PACDB","denotations":[{"id":"_T1","span":{"begin":191,"end":219},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC512"},{"id":"_T2","span":{"begin":191,"end":226},"obj":"http://acgg.asia/db/diseases/pacdb/lec?ids=LEC355,LEC479,LEC567,LEC587"}],"attributes":[{"subj":"_T1","pred":"source","obj":"GlycoBiology-PACDB"},{"subj":"_T2","pred":"source","obj":"GlycoBiology-PACDB"}]},{"project":"ICD10","denotations":[{"id":"T1","span":{"begin":197,"end":213},"obj":"http://purl.bioontology.org/ontology/ICD10/D84.9"},{"id":"T2","span":{"begin":257,"end":274},"obj":"http://purl.bioontology.org/ontology/ICD10/B34.9"}],"attributes":[{"subj":"T1","pred":"source","obj":"ICD10"},{"subj":"T2","pred":"source","obj":"ICD10"}]},{"project":"uniprot-human","denotations":[{"id":"T1","span":{"begin":535,"end":538},"obj":"http://www.uniprot.org/uniprot/P01730"},{"id":"T2","span":{"begin":550,"end":555},"obj":"http://www.uniprot.org/uniprot/Q14624"},{"id":"T3","span":{"begin":1194,"end":1199},"obj":"http://www.uniprot.org/uniprot/Q14624"},{"id":"T4","span":{"begin":1317,"end":1322},"obj":"http://www.uniprot.org/uniprot/Q14624"},{"id":"T5","span":{"begin":1365,"end":1370},"obj":"http://www.uniprot.org/uniprot/Q14624"},{"id":"T6","span":{"begin":1278,"end":1281},"obj":"http://www.uniprot.org/uniprot/P35270"},{"id":"T7","span":{"begin":1278,"end":1281},"obj":"http://www.uniprot.org/uniprot/P25103"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-human"},{"subj":"T2","pred":"source","obj":"uniprot-human"},{"subj":"T3","pred":"source","obj":"uniprot-human"},{"subj":"T4","pred":"source","obj":"uniprot-human"},{"subj":"T5","pred":"source","obj":"uniprot-human"},{"subj":"T6","pred":"source","obj":"uniprot-human"},{"subj":"T7","pred":"source","obj":"uniprot-human"}]},{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":535,"end":538},"obj":"http://www.uniprot.org/uniprot/P06332"},{"id":"T2","span":{"begin":1278,"end":1281},"obj":"http://www.uniprot.org/uniprot/Q64105"},{"id":"T3","span":{"begin":1278,"end":1281},"obj":"http://www.uniprot.org/uniprot/P30548"},{"id":"T4","span":{"begin":1388,"end":1391},"obj":"http://www.uniprot.org/uniprot/P11370"}],"attributes":[{"subj":"T1","pred":"source","obj":"uniprot-mouse"},{"subj":"T2","pred":"source","obj":"uniprot-mouse"},{"subj":"T3","pred":"source","obj":"uniprot-mouse"},{"subj":"T4","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T1","span":{"begin":106,"end":116},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/608684"},{"id":"T2","span":{"begin":132,"end":136},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/9973"},{"id":"T3","span":{"begin":191,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/11709"},{"id":"T4","span":{"begin":191,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/11676"},{"id":"T5","span":{"begin":191,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/12721"},{"id":"T6","span":{"begin":191,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/11723"},{"id":"T7","span":{"begin":197,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/11673"},{"id":"T8","span":{"begin":214,"end":219},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/184751"},{"id":"T9","span":{"begin":578,"end":584},"obj":"http://purl.bioontology.org/ontology/STY/T051"},{"id":"T10","span":{"begin":588,"end":593},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/184751"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T2","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T6","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T7","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T8","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T9","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T10","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":55,"end":64},"obj":"http://purl.obolibrary.org/obo/GO_0046960"},{"id":"T2","span":{"begin":1459,"end":1468},"obj":"http://purl.obolibrary.org/obo/GO_0046960"},{"id":"T3","span":{"begin":81,"end":94},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T4","span":{"begin":1489,"end":1502},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T5","span":{"begin":145,"end":169},"obj":"http://purl.obolibrary.org/obo/GO_0032091"},{"id":"T6","span":{"begin":257,"end":274},"obj":"http://purl.obolibrary.org/obo/GO_0016032"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-BP"},{"subj":"T2","pred":"source","obj":"GO-BP"},{"subj":"T3","pred":"source","obj":"GO-BP"},{"subj":"T4","pred":"source","obj":"GO-BP"},{"subj":"T5","pred":"source","obj":"GO-BP"},{"subj":"T6","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T1","span":{"begin":15,"end":22},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T2","span":{"begin":145,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T3","span":{"begin":539,"end":546},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T4","span":{"begin":687,"end":694},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T5","span":{"begin":760,"end":767},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T6","span":{"begin":807,"end":814},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T7","span":{"begin":1306,"end":1313},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T8","span":{"begin":1354,"end":1361},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T9","span":{"begin":1377,"end":1384},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T10","span":{"begin":1519,"end":1526},"obj":"http://purl.obolibrary.org/obo/GO_0070026"},{"id":"T11","span":{"begin":15,"end":22},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T12","span":{"begin":145,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T13","span":{"begin":539,"end":546},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T14","span":{"begin":687,"end":694},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T15","span":{"begin":760,"end":767},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T16","span":{"begin":807,"end":814},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T17","span":{"begin":1306,"end":1313},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T18","span":{"begin":1354,"end":1361},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T19","span":{"begin":1377,"end":1384},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T20","span":{"begin":1519,"end":1526},"obj":"http://purl.obolibrary.org/obo/GO_0003680"},{"id":"T21","span":{"begin":15,"end":22},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T22","span":{"begin":145,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T23","span":{"begin":539,"end":546},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T24","span":{"begin":687,"end":694},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T25","span":{"begin":760,"end":767},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T26","span":{"begin":807,"end":814},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T27","span":{"begin":1306,"end":1313},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T28","span":{"begin":1354,"end":1361},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T29","span":{"begin":1377,"end":1384},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T30","span":{"begin":1519,"end":1526},"obj":"http://purl.obolibrary.org/obo/GO_0017091"},{"id":"T31","span":{"begin":15,"end":22},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T32","span":{"begin":145,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T33","span":{"begin":539,"end":546},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T34","span":{"begin":687,"end":694},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T35","span":{"begin":760,"end":767},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T36","span":{"begin":807,"end":814},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T37","span":{"begin":1306,"end":1313},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T38","span":{"begin":1354,"end":1361},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T39","span":{"begin":1377,"end":1384},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T40","span":{"begin":1519,"end":1526},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T41","span":{"begin":117,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T42","span":{"begin":401,"end":409},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T43","span":{"begin":899,"end":907},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T44","span":{"begin":497,"end":507},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T45","span":{"begin":1550,"end":1560},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T46","span":{"begin":137,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0005537"},{"id":"T47","span":{"begin":752,"end":767},"obj":"http://purl.obolibrary.org/obo/GO_0005537"},{"id":"T48","span":{"begin":145,"end":161},"obj":"http://purl.obolibrary.org/obo/GO_0005515"},{"id":"T49","span":{"begin":760,"end":776},"obj":"http://purl.obolibrary.org/obo/GO_0005515"},{"id":"T50","span":{"begin":1519,"end":1542},"obj":"http://purl.obolibrary.org/obo/GO_0005515"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-MF"},{"subj":"T2","pred":"source","obj":"GO-MF"},{"subj":"T3","pred":"source","obj":"GO-MF"},{"subj":"T4","pred":"source","obj":"GO-MF"},{"subj":"T5","pred":"source","obj":"GO-MF"},{"subj":"T6","pred":"source","obj":"GO-MF"},{"subj":"T7","pred":"source","obj":"GO-MF"},{"subj":"T8","pred":"source","obj":"GO-MF"},{"subj":"T9","pred":"source","obj":"GO-MF"},{"subj":"T10","pred":"source","obj":"GO-MF"},{"subj":"T11","pred":"source","obj":"GO-MF"},{"subj":"T12","pred":"source","obj":"GO-MF"},{"subj":"T13","pred":"source","obj":"GO-MF"},{"subj":"T14","pred":"source","obj":"GO-MF"},{"subj":"T15","pred":"source","obj":"GO-MF"},{"subj":"T16","pred":"source","obj":"GO-MF"},{"subj":"T17","pred":"source","obj":"GO-MF"},{"subj":"T18","pred":"source","obj":"GO-MF"},{"subj":"T19","pred":"source","obj":"GO-MF"},{"subj":"T20","pred":"source","obj":"GO-MF"},{"subj":"T21","pred":"source","obj":"GO-MF"},{"subj":"T22","pred":"source","obj":"GO-MF"},{"subj":"T23","pred":"source","obj":"GO-MF"},{"subj":"T24","pred":"source","obj":"GO-MF"},{"subj":"T25","pred":"source","obj":"GO-MF"},{"subj":"T26","pred":"source","obj":"GO-MF"},{"subj":"T27","pred":"source","obj":"GO-MF"},{"subj":"T28","pred":"source","obj":"GO-MF"},{"subj":"T29","pred":"source","obj":"GO-MF"},{"subj":"T30","pred":"source","obj":"GO-MF"},{"subj":"T31","pred":"source","obj":"GO-MF"},{"subj":"T32","pred":"source","obj":"GO-MF"},{"subj":"T33","pred":"source","obj":"GO-MF"},{"subj":"T34","pred":"source","obj":"GO-MF"},{"subj":"T35","pred":"source","obj":"GO-MF"},{"subj":"T36","pred":"source","obj":"GO-MF"},{"subj":"T37","pred":"source","obj":"GO-MF"},{"subj":"T38","pred":"source","obj":"GO-MF"},{"subj":"T39","pred":"source","obj":"GO-MF"},{"subj":"T40","pred":"source","obj":"GO-MF"},{"subj":"T41","pred":"source","obj":"GO-MF"},{"subj":"T42","pred":"source","obj":"GO-MF"},{"subj":"T43","pred":"source","obj":"GO-MF"},{"subj":"T44","pred":"source","obj":"GO-MF"},{"subj":"T45","pred":"source","obj":"GO-MF"},{"subj":"T46","pred":"source","obj":"GO-MF"},{"subj":"T47","pred":"source","obj":"GO-MF"},{"subj":"T48","pred":"source","obj":"GO-MF"},{"subj":"T49","pred":"source","obj":"GO-MF"},{"subj":"T50","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":30,"end":38},"obj":"http://purl.obolibrary.org/obo/GO_0009274"},{"id":"T2","span":{"begin":710,"end":718},"obj":"http://purl.obolibrary.org/obo/GO_0009274"},{"id":"T3","span":{"begin":861,"end":869},"obj":"http://purl.obolibrary.org/obo/GO_0009274"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"},{"subj":"T2","pred":"source","obj":"GO-CC"},{"subj":"T3","pred":"source","obj":"GO-CC"}]},{"project":"GlycoBiology-MAT","denotations":[{"id":"T1","span":{"begin":572,"end":577},"obj":"http://purl.obolibrary.org/obo/MAT_0000488"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-MAT"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":132,"end":448},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":449,"end":600},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":601,"end":777},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":778,"end":913},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":914,"end":1036},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":1037,"end":1371},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1372,"end":1543},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1544,"end":1701},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"T2","span":{"begin":132,"end":448},"obj":"Sentence"},{"id":"T3","span":{"begin":449,"end":600},"obj":"Sentence"},{"id":"T4","span":{"begin":601,"end":777},"obj":"Sentence"},{"id":"T5","span":{"begin":778,"end":913},"obj":"Sentence"},{"id":"T6","span":{"begin":914,"end":1036},"obj":"Sentence"},{"id":"T7","span":{"begin":1037,"end":1371},"obj":"Sentence"},{"id":"T8","span":{"begin":1372,"end":1543},"obj":"Sentence"},{"id":"T9","span":{"begin":1544,"end":1701},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":131},"obj":"Sentence"},{"id":"T2","span":{"begin":132,"end":448},"obj":"Sentence"},{"id":"T3","span":{"begin":449,"end":600},"obj":"Sentence"},{"id":"T4","span":{"begin":601,"end":777},"obj":"Sentence"},{"id":"T5","span":{"begin":778,"end":913},"obj":"Sentence"},{"id":"T6","span":{"begin":914,"end":1036},"obj":"Sentence"},{"id":"T7","span":{"begin":1037,"end":1371},"obj":"Sentence"},{"id":"T8","span":{"begin":1372,"end":1543},"obj":"Sentence"},{"id":"T9","span":{"begin":1544,"end":1701},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"}]},{"project":"GlycoBiology-Motifs","denotations":[{"id":"T1","span":{"begin":1170,"end":1182},"obj":"http://rdf.glycoinfo.org/glycan/G00028MO"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-Motifs"}]},{"project":"Lectin","denotations":[{"id":"Lectin_T1","span":{"begin":465,"end":469},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T2","span":{"begin":698,"end":702},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T3","span":{"begin":848,"end":852},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T4","span":{"begin":1099,"end":1103},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T5","span":{"begin":1287,"end":1291},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T6","span":{"begin":1349,"end":1353},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T7","span":{"begin":1372,"end":1376},"obj":"https://acgg.asia/db/lfdb/LfDB0170"},{"id":"Lectin_T8","span":{"begin":1608,"end":1612},"obj":"https://acgg.asia/db/lfdb/LfDB0170"}],"attributes":[{"subj":"Lectin_T1","pred":"source","obj":"Lectin"},{"subj":"Lectin_T2","pred":"source","obj":"Lectin"},{"subj":"Lectin_T3","pred":"source","obj":"Lectin"},{"subj":"Lectin_T4","pred":"source","obj":"Lectin"},{"subj":"Lectin_T5","pred":"source","obj":"Lectin"},{"subj":"Lectin_T6","pred":"source","obj":"Lectin"},{"subj":"Lectin_T7","pred":"source","obj":"Lectin"},{"subj":"Lectin_T8","pred":"source","obj":"Lectin"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":197,"end":213},"obj":"Disease"},{"id":"T2","span":{"begin":1670,"end":1683},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0021094"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005109"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":572,"end":577},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000488"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":197,"end":213},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0002721"},{"subj":"T1","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":191,"end":226},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":893,"end":898},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"11676"},{"id":"A2","pred":"db_id","subj":"T2","obj":"9606"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":30,"end":38},"obj":"Body_part"},{"id":"T2","span":{"begin":710,"end":718},"obj":"Body_part"},{"id":"T3","span":{"begin":861,"end":869},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/GO_0031975"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/GO_0031975"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/GO_0031975"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Glycan-Motif","color":"#ece593","default":true},{"id":"GlyCosmos6-Glycan-Motif-Image","color":"#cb93ec"},{"id":"GlyCosmos6-Glycan-Motif-Structure","color":"#93ecb1"},{"id":"Glycosmos6-MAT","color":"#ec9793"},{"id":"GlycoBiology-PACDB","color":"#93a9ec"},{"id":"ICD10","color":"#c3ec93"},{"id":"uniprot-human","color":"#ec93dd"},{"id":"uniprot-mouse","color":"#93ece1"},{"id":"GlycoBiology-NCBITAXON","color":"#ecc793"},{"id":"GO-BP","color":"#ad93ec"},{"id":"GO-MF","color":"#93ec93"},{"id":"GO-CC","color":"#ec93ac"},{"id":"GlycoBiology-MAT","color":"#93c6ec"},{"id":"sentences","color":"#e1ec93"},{"id":"GlycoBiology-Motifs","color":"#dd93ec"},{"id":"Lectin","color":"#93ecc3"},{"id":"mondo_disease","color":"#eca993"},{"id":"Anatomy-MAT","color":"#9396ec"},{"id":"HP-phenotype","color":"#b0ec93"},{"id":"NCBITAXON","color":"#ec93ca"},{"id":"Anatomy-UBERON","color":"#93e4ec"}]}]}}