PubMed:15820770 / 240-497 JSONTXT

{"project":"PubTator4TogoVar","denotations":[{"id":"15820770_0","span":{"begin":176,"end":211},"obj":"ProteinMutation"}],"attributes":[{"id":"15820770_0_ProteinMutation","pred":"proteinmutation","subj":"15820770_0","obj":"rs4588"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-sentences","denotations":[{"id":"T4","span":{"begin":0,"end":257},"obj":"Sentence"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-entities-OrganismTaxon-PD","denotations":[{"id":"T1","span":{"begin":161,"end":166},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":202,"end":207},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"NCBItxid:79338"},{"id":"A2","pred":"db_id","subj":"T2","obj":"NCBItxid:79338"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-entities","denotations":[{"id":"1753","span":{"begin":52,"end":55},"obj":"GeneOrGeneProduct"},{"id":"1754","span":{"begin":95,"end":170},"obj":"SequenceVariant"},{"id":"1755","span":{"begin":176,"end":211},"obj":"SequenceVariant"},{"id":"1756","span":{"begin":236,"end":256},"obj":"SequenceVariant"}],"attributes":[{"id":"A7","pred":"db_id","subj":"1753","obj":"NCBIGene:2638"},{"id":"A8","pred":"db_id","subj":"1754","obj":"p|SUB|D|416|E"},{"id":"A9","pred":"db_id","subj":"1755","obj":"p|SUB|T|420|K"},{"id":"A10","pred":"db_id","subj":"1756","obj":"p|SUB|T||K"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T7","span":{"begin":74,"end":84},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":95,"end":98},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":127,"end":135},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":136,"end":140},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":144,"end":152},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":153,"end":157},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":250,"end":256},"obj":"GeneOrGeneProduct"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T6","span":{"begin":74,"end":84},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":136,"end":140},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":153,"end":157},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":250,"end":256},"obj":"GeneOrGeneProduct"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-Chemical-MeSH-CHEBI","denotations":[{"id":"T6","span":{"begin":52,"end":55},"obj":"ChemicalEntity"},{"id":"T8","span":{"begin":95,"end":98},"obj":"ChemicalEntity"},{"id":"T9","span":{"begin":101,"end":104},"obj":"ChemicalEntity"},{"id":"T10","span":{"begin":127,"end":140},"obj":"ChemicalEntity"},{"id":"T11","span":{"begin":144,"end":157},"obj":"ChemicalEntity"},{"id":"T13","span":{"begin":176,"end":179},"obj":"ChemicalEntity"},{"id":"T14","span":{"begin":182,"end":185},"obj":"ChemicalEntity"},{"id":"T15","span":{"begin":236,"end":245},"obj":"ChemicalEntity"},{"id":"T16","span":{"begin":250,"end":256},"obj":"ChemicalEntity"}],"attributes":[{"id":"A6","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_35861"},{"id":"A7","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_34687"},{"id":"A8","pred":"ID:","subj":"T8","obj":"C020749"},{"id":"A9","pred":"ID:","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_143889"},{"id":"A10","pred":"ID:","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_22660"},{"id":"A11","pred":"ID:","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_18237"},{"id":"A12","pred":"ID:","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_16015"},{"id":"A13","pred":"ID:","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_73345"},{"id":"A14","pred":"ID:","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_73318"},{"id":"A15","pred":"ID:","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_26986"},{"id":"A16","pred":"ID:","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_25094"},{"id":"A17","pred":"ID:","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_18019"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-NCBITaxon-2","denotations":[{"id":"T1","span":{"begin":101,"end":104},"obj":"OrganismTaxon"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"LitCoin-training-merged","denotations":[{"id":"T16","span":{"begin":250,"end":256},"obj":"ChemicalEntity"},{"id":"T15","span":{"begin":236,"end":245},"obj":"ChemicalEntity"},{"id":"T14","span":{"begin":182,"end":185},"obj":"ChemicalEntity"},{"id":"T13","span":{"begin":176,"end":179},"obj":"ChemicalEntity"},{"id":"T11","span":{"begin":144,"end":157},"obj":"ChemicalEntity"},{"id":"T10","span":{"begin":127,"end":140},"obj":"ChemicalEntity"},{"id":"T9","span":{"begin":101,"end":104},"obj":"ChemicalEntity"},{"id":"T8","span":{"begin":95,"end":98},"obj":"ChemicalEntity"},{"id":"T6","span":{"begin":52,"end":55},"obj":"ChemicalEntity"},{"id":"T1522","span":{"begin":101,"end":104},"obj":"OrganismTaxon"}],"attributes":[{"id":"A17","pred":"ID:","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_18019"},{"id":"A16","pred":"ID:","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_25094"},{"id":"A15","pred":"ID:","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_26986"},{"id":"A14","pred":"ID:","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_73318"},{"id":"A13","pred":"ID:","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_73345"},{"id":"A12","pred":"ID:","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_16015"},{"id":"A11","pred":"ID:","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_18237"},{"id":"A10","pred":"ID:","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_22660"},{"id":"A9","pred":"ID:","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_143889"},{"id":"A8","pred":"ID:","subj":"T8","obj":"C020749"},{"id":"A7","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_34687"},{"id":"A6","pred":"ID:","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_35861"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}

{"project":"tmVarCorpus","denotations":[{"id":"T1","span":{"begin":95,"end":104},"obj":"DNAMutation:|SUB|GAT||GAG"},{"id":"T2","span":{"begin":176,"end":211},"obj":"DNAMutation:|SUB|ACG|CODON420|AAG"}],"text":"There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT--\u003eGAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG--\u003eAAG substitution in codon 420 leads to an exchange of threonine for lysine."}