PubMed:15820770 / 240-497
Annnotations
PubTator4TogoVar
| Id | Subject | Object | Predicate | Lexical cue | proteinmutation |
|---|---|---|---|---|---|
| 15820770_0 | 176-211 | ProteinMutation | denotes | ACG-->AAG substitution in codon 420 | rs4588 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-257 | Sentence | denotes | There are two known polymorphisms in exon 11 of the DBP gene resulting in amino acid variants: GAT-->GAG substitution replaces aspartic acid by glutamic acid in codon 416; and ACG-->AAG substitution in codon 420 leads to an exchange of threonine for lysine. |
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 161-166 | OrganismTaxon | denotes | codon | NCBItxid:79338 |
| T2 | 202-207 | OrganismTaxon | denotes | codon | NCBItxid:79338 |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 1753 | 52-55 | GeneOrGeneProduct | denotes | DBP | NCBIGene:2638 |
| 1754 | 95-170 | SequenceVariant | denotes | GAT-->GAG substitution replaces aspartic acid by glutamic acid in codon 416 | p|SUB|D|416|E |
| 1755 | 176-211 | SequenceVariant | denotes | ACG-->AAG substitution in codon 420 | p|SUB|T|420|K |
| 1756 | 236-256 | SequenceVariant | denotes | threonine for lysine | p|SUB|T||K |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 74-84 | GeneOrGeneProduct | denotes | amino acid |
| T8 | 95-98 | GeneOrGeneProduct | denotes | GAT |
| T9 | 127-135 | GeneOrGeneProduct | denotes | aspartic |
| T10 | 136-140 | GeneOrGeneProduct | denotes | acid |
| T11 | 144-152 | GeneOrGeneProduct | denotes | glutamic |
| T12 | 153-157 | GeneOrGeneProduct | denotes | acid |
| T13 | 250-256 | GeneOrGeneProduct | denotes | lysine |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 74-84 | GeneOrGeneProduct | denotes | amino acid |
| T7 | 136-140 | GeneOrGeneProduct | denotes | acid |
| T8 | 153-157 | GeneOrGeneProduct | denotes | acid |
| T9 | 250-256 | GeneOrGeneProduct | denotes | lysine |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T6 | 52-55 | ChemicalEntity | denotes | DBP | http://purl.obolibrary.org/obo/CHEBI_35861|http://purl.obolibrary.org/obo/CHEBI_34687 |
| T8 | 95-98 | ChemicalEntity | denotes | GAT | C020749 |
| T9 | 101-104 | ChemicalEntity | denotes | GAG | http://purl.obolibrary.org/obo/CHEBI_143889 |
| T10 | 127-140 | ChemicalEntity | denotes | aspartic acid | http://purl.obolibrary.org/obo/CHEBI_22660 |
| T11 | 144-157 | ChemicalEntity | denotes | glutamic acid | http://purl.obolibrary.org/obo/CHEBI_18237|http://purl.obolibrary.org/obo/CHEBI_16015 |
| T13 | 176-179 | ChemicalEntity | denotes | ACG | http://purl.obolibrary.org/obo/CHEBI_73345 |
| T14 | 182-185 | ChemicalEntity | denotes | AAG | http://purl.obolibrary.org/obo/CHEBI_73318 |
| T15 | 236-245 | ChemicalEntity | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T16 | 250-256 | ChemicalEntity | denotes | lysine | http://purl.obolibrary.org/obo/CHEBI_25094|http://purl.obolibrary.org/obo/CHEBI_18019 |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 101-104 | OrganismTaxon | denotes | GAG |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T16 | 250-256 | ChemicalEntity | denotes | lysine | http://purl.obolibrary.org/obo/CHEBI_18019|http://purl.obolibrary.org/obo/CHEBI_25094 |
| T15 | 236-245 | ChemicalEntity | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T14 | 182-185 | ChemicalEntity | denotes | AAG | http://purl.obolibrary.org/obo/CHEBI_73318 |
| T13 | 176-179 | ChemicalEntity | denotes | ACG | http://purl.obolibrary.org/obo/CHEBI_73345 |
| T11 | 144-157 | ChemicalEntity | denotes | glutamic acid | http://purl.obolibrary.org/obo/CHEBI_16015|http://purl.obolibrary.org/obo/CHEBI_18237 |
| T10 | 127-140 | ChemicalEntity | denotes | aspartic acid | http://purl.obolibrary.org/obo/CHEBI_22660 |
| T9 | 101-104 | ChemicalEntity | denotes | GAG | http://purl.obolibrary.org/obo/CHEBI_143889 |
| T8 | 95-98 | ChemicalEntity | denotes | GAT | C020749 |
| T6 | 52-55 | ChemicalEntity | denotes | DBP | http://purl.obolibrary.org/obo/CHEBI_34687|http://purl.obolibrary.org/obo/CHEBI_35861 |
| T1522 | 101-104 | OrganismTaxon | denotes | GAG |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 95-104 | DNAMutation:|SUB|GAT||GAG | denotes | GAT-->GAG |
| T2 | 176-211 | DNAMutation:|SUB|ACG|CODON420|AAG | denotes | ACG-->AAG substitution in codon 420 |