PubMed:15788739 / 177-464 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/15788739","sourcedb":"PubMed","sourceid":"15788739","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/15788739","text":"Mouse F9 embryonal carcinoma cells have been widely used as a model for studying the mechanism of embryonic differentiation, because they are similar to the inner cell mass of early mouse embryos and can differentiate into primitive endoderm (PrE) following retinoic acid (RA) treatment.","tracks":[{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":157,"end":172},"obj":"http://purl.obolibrary.org/obo/MAT_0000250"},{"id":"T2","span":{"begin":188,"end":195},"obj":"http://purl.obolibrary.org/obo/MAT_0000226"},{"id":"T3","span":{"begin":233,"end":241},"obj":"http://purl.obolibrary.org/obo/MAT_0000175"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T2","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T3","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"uniprot-human","denotations":[{"id":"T10","span":{"begin":6,"end":8},"obj":"http://www.uniprot.org/uniprot/P00740"}],"attributes":[{"subj":"T10","pred":"source","obj":"uniprot-human"}]},{"project":"uniprot-mouse","denotations":[{"id":"T4","span":{"begin":6,"end":8},"obj":"http://www.uniprot.org/uniprot/P16294"}],"attributes":[{"subj":"T4","pred":"source","obj":"uniprot-mouse"}]},{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T3","span":{"begin":19,"end":28},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/166034"},{"id":"T4","span":{"begin":29,"end":34},"obj":"http://purl.bioontology.org/ontology/STY/T025"},{"id":"T5","span":{"begin":85,"end":94},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/127244"}],"attributes":[{"subj":"T3","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T4","pred":"source","obj":"GlycoBiology-NCBITAXON"},{"subj":"T5","pred":"source","obj":"GlycoBiology-NCBITAXON"}]},{"project":"GO-BP","denotations":[{"id":"T8","span":{"begin":243,"end":246},"obj":"http://purl.obolibrary.org/obo/GO_0003904"}],"attributes":[{"subj":"T8","pred":"source","obj":"GO-BP"}]},{"project":"GO-CC","denotations":[{"id":"T2","span":{"begin":29,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T3","span":{"begin":163,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T2","pred":"source","obj":"GO-CC"},{"subj":"T3","pred":"source","obj":"GO-CC"}]},{"project":"UBERON-AE","denotations":[{"id":"T1","span":{"begin":157,"end":172},"obj":"http://purl.obolibrary.org/obo/UBERON_0000087"},{"id":"T2","span":{"begin":188,"end":195},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T3","span":{"begin":233,"end":241},"obj":"http://purl.obolibrary.org/obo/UBERON_0000925"}],"attributes":[{"subj":"T1","pred":"source","obj":"UBERON-AE"},{"subj":"T2","pred":"source","obj":"UBERON-AE"},{"subj":"T3","pred":"source","obj":"UBERON-AE"}]},{"project":"GlycoBiology-MAT","denotations":[{"id":"T1","span":{"begin":157,"end":172},"obj":"http://purl.obolibrary.org/obo/MAT_0000250"},{"id":"T2","span":{"begin":188,"end":195},"obj":"http://purl.obolibrary.org/obo/MAT_0000226"},{"id":"T3","span":{"begin":233,"end":241},"obj":"http://purl.obolibrary.org/obo/MAT_0000175"}],"attributes":[{"subj":"T1","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T2","pred":"source","obj":"GlycoBiology-MAT"},{"subj":"T3","pred":"source","obj":"GlycoBiology-MAT"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T2","span":{"begin":0,"end":287},"obj":"Sentence"},{"id":"T2","span":{"begin":0,"end":287},"obj":"Sentence"},{"id":"T2","span":{"begin":0,"end":287},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"}]},{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":157,"end":172},"obj":"http://purl.obolibrary.org/obo/UBERON_0000087"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":188,"end":195},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":233,"end":241},"obj":"http://purl.obolibrary.org/obo/UBERON_0000925"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"performance-test"}]},{"project":"mondo_disease","denotations":[{"id":"T2","span":{"begin":9,"end":28},"obj":"Disease"}],"attributes":[{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005440"},{"subj":"T2","pred":"source","obj":"mondo_disease"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":0,"end":5},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":182,"end":187},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"10088"},{"id":"A2","pred":"db_id","subj":"T1","obj":"10090"},{"id":"A3","pred":"db_id","subj":"T3","obj":"10088"},{"id":"A4","pred":"db_id","subj":"T3","obj":"10090"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T3","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":157,"end":172},"obj":"Body_part"},{"id":"T2","span":{"begin":223,"end":241},"obj":"Body_part"},{"id":"T3","span":{"begin":243,"end":246},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0000087"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0008776"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0008776"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":157,"end":172},"obj":"Body_part"},{"id":"T2","span":{"begin":188,"end":195},"obj":"Body_part"},{"id":"T3","span":{"begin":233,"end":241},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000250"},{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000226"},{"id":"A3","pred":"mat_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MAT_0000175"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"},{"subj":"T2","pred":"source","obj":"Anatomy-MAT"},{"subj":"T3","pred":"source","obj":"Anatomy-MAT"}]},{"project":"HP-phenotype","denotations":[{"id":"T2","span":{"begin":19,"end":28},"obj":"Phenotype"},{"id":"T3","span":{"begin":273,"end":275},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0030731"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0001370"},{"subj":"T2","pred":"source","obj":"HP-phenotype"},{"subj":"T3","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Glycosmos6-MAT","color":"#cf93ec","default":true},{"id":"uniprot-human","color":"#93ecb5"},{"id":"uniprot-mouse","color":"#ec9b93"},{"id":"GlycoBiology-NCBITAXON","color":"#93a4ec"},{"id":"GO-BP","color":"#beec93"},{"id":"GO-CC","color":"#ec93d8"},{"id":"UBERON-AE","color":"#93ece6"},{"id":"GlycoBiology-MAT","color":"#eccc93"},{"id":"sentences","color":"#b293ec"},{"id":"performance-test","color":"#93ec98"},{"id":"mondo_disease","color":"#ec93a8"},{"id":"NCBITAXON","color":"#93c2ec"},{"id":"Anatomy-UBERON","color":"#dcec93"},{"id":"Anatomy-MAT","color":"#e293ec"},{"id":"HP-phenotype","color":"#93ecc8"}]}]}}