PubMed:15671273
Annnotations
PubMed_Structured_Abstracts
{"project":"PubMed_Structured_Abstracts","denotations":[{"id":"T1","span":{"begin":112,"end":322},"obj":"OBJECTIVE"},{"id":"T2","span":{"begin":332,"end":967},"obj":"METHODS"},{"id":"T3","span":{"begin":977,"end":1516},"obj":"RESULTS"},{"id":"T4","span":{"begin":1530,"end":2101},"obj":"CONCLUSIONS"}],"text":"PAF-induced furin and MT1-MMP expression is independent of MMP-2 activation in corneal myofibroblasts.\nPURPOSE: Corneal stromal myofibroblasts express the platelet-activating factor (PAF) receptor, but its role is unclear. In the present study, the effect of PAF on induction of metalloproteinases (MMPs) was investigated.\nMETHODS: Rabbit corneal myofibroblasts were identified by immunodetection of alpha-smooth muscle (alpha-SM)-actin. MT1-MMP, MMP-2, MMP-9, and tissue inhibitor of matrix metalloproteinase (TIMP)-2 were detected by immunofluorescence. Cells were treated with 100 nM cPAF, with or without the PAF antagonist BN 50730 or the furin inhibitor nona-D-arg-NH(2). Gene-expression levels for furin, urokinase plasminogen activator, MMP-2, MMP-9, MT1-MMP, and TIMP-2 were determined by real-time PCR. Protein expression was assessed by Western blot. MMP-2 and -9 activity was determined by gelatin zymography. Active MT1-MMP levels were measured by ELISA.\nRESULTS: cPAF triggered significantly increased MT1-MMP, MMP-2, MMP-9, and TIMP-2 mRNA expression, followed by increased active MT1-MMP protein expression at 12 hours, whereas TIMP-2 protein increased at 24 hours. PAF also induced furin gene expression, followed by increased protein expression. Nona-D-arg-NH(2) blocked cPAF induction of MT1-MMP activity. PAF-treated myofibroblasts showed increased active MMP-9 protein, but unchanged MMP-2 activity. Pretreatment with BN 50730 blocked PAF-induced transcription and translation of these proteins.\nCONCLUSIONS: PAF, through a receptor-mediated mechanism, induces a specific pattern of furin, MMP, and TIMP-2 expression in corneal myofibroblasts. MMP-2 activity was unchanged by PAF treatment. These results suggest that in response to the inflammatory mediator PAF, induction of MT1-MMP is independent of MMP-2 activity in corneal myofibroblasts. Thus, PAF-mediated changes in extracellular matrix composition surrounding the myofibroblasts could be important in regulating the corneal scarring process. Moreover, PAF antagonists could be useful in maintaining corneal transparency."}
c_corpus
{"project":"c_corpus","denotations":[{"id":"T1","span":{"begin":0,"end":3},"obj":"PR:Q6RIA2"},{"id":"T2","span":{"begin":0,"end":3},"obj":"PR:Q15004"},{"id":"T5","span":{"begin":0,"end":3},"obj":"PR:000012225"},{"id":"T7","span":{"begin":0,"end":3},"obj":"PR:Q9CQX4"},{"id":"T6","span":{"begin":0,"end":3},"obj":"CVCL_XY57"},{"id":"T3","span":{"begin":0,"end":3},"obj":"CHEBI:52450"},{"id":"T4","span":{"begin":0,"end":3},"obj":"CHEBI:44811"},{"id":"T8","span":{"begin":12,"end":17},"obj":"P09958"},{"id":"T9","span":{"begin":12,"end":17},"obj":"P23188"},{"id":"T10","span":{"begin":12,"end":17},"obj":"PR:000003137"},{"id":"T12","span":{"begin":12,"end":17},"obj":"PR:P09958"},{"id":"T13","span":{"begin":12,"end":17},"obj":"Q28193"},{"id":"T14","span":{"begin":12,"end":17},"obj":"PR:P23188"},{"id":"T15","span":{"begin":12,"end":17},"obj":"P23377"},{"id":"T16","span":{"begin":12,"end":17},"obj":"PR:P23377"},{"id":"T11","span":{"begin":12,"end":17},"obj":"D045683"},{"id":"T39","span":{"begin":22,"end":25},"obj":"CVCL_2501"},{"id":"T24","span":{"begin":22,"end":25},"obj":"GO:0047152"},{"id":"T33","span":{"begin":22,"end":25},"obj":"GO:0043791"},{"id":"T42","span":{"begin":22,"end":25},"obj":"GO:0043834"},{"id":"T58","span":{"begin":22,"end":29},"obj":"Q9XT90"},{"id":"T59","span":{"begin":22,"end":29},"obj":"P50281"},{"id":"T60","span":{"begin":22,"end":29},"obj":"Q9GLE4"},{"id":"T61","span":{"begin":22,"end":29},"obj":"PR:000010474"},{"id":"T62","span":{"begin":22,"end":29},"obj":"Q10739"},{"id":"T63","span":{"begin":22,"end":29},"obj":"Q95220"},{"id":"T65","span":{"begin":22,"end":29},"obj":"P53690"},{"id":"T64","span":{"begin":22,"end":29},"obj":"D053511"},{"id":"T68","span":{"begin":26,"end":29},"obj":"GO:0004235"},{"id":"T71","span":{"begin":59,"end":62},"obj":"CHEBI:340824"},{"id":"T74","span":{"begin":59,"end":62},"obj":"CHEBI:59761"},{"id":"T75","span":{"begin":59,"end":64},"obj":"PR:P08253"},{"id":"T76","span":{"begin":59,"end":64},"obj":"Q9GLE5"},{"id":"T77","span":{"begin":59,"end":64},"obj":"P08253"},{"id":"T78","span":{"begin":59,"end":64},"obj":"Q90611"},{"id":"T80","span":{"begin":59,"end":64},"obj":"PR:Q8MPP3"},{"id":"T81","span":{"begin":59,"end":64},"obj":"P33436"},{"id":"T82","span":{"begin":59,"end":64},"obj":"PR:Q90611"},{"id":"T83","span":{"begin":59,"end":64},"obj":"PR:P33436"},{"id":"T84","span":{"begin":59,"end":64},"obj":"PR:000010479"},{"id":"T85","span":{"begin":59,"end":64},"obj":"PR:P33434"},{"id":"T86","span":{"begin":59,"end":64},"obj":"P33434"},{"id":"T87","span":{"begin":59,"end":64},"obj":"P50757"},{"id":"T79","span":{"begin":59,"end":64},"obj":"GO:0004228"},{"id":"T88","span":{"begin":155,"end":163},"obj":"CL:0000233"},{"id":"T89","span":{"begin":155,"end":181},"obj":"CHEBI:36707"},{"id":"T90","span":{"begin":155,"end":181},"obj":"CHEBI:52450"},{"id":"T91","span":{"begin":155,"end":181},"obj":"CHEBI:44811"},{"id":"T92","span":{"begin":155,"end":181},"obj":"CHEBI:78103"},{"id":"T93","span":{"begin":155,"end":181},"obj":"D010972"},{"id":"T94","span":{"begin":155,"end":181},"obj":"D010972"},{"id":"T100","span":{"begin":183,"end":186},"obj":"CVCL_XY57"},{"id":"T97","span":{"begin":183,"end":186},"obj":"CHEBI:52450"},{"id":"T98","span":{"begin":183,"end":186},"obj":"CHEBI:44811"},{"id":"T102","span":{"begin":183,"end":196},"obj":"PR:000050017"},{"id":"T103","span":{"begin":259,"end":262},"obj":"PR:Q6RIA2"},{"id":"T104","span":{"begin":259,"end":262},"obj":"PR:Q15004"},{"id":"T107","span":{"begin":259,"end":262},"obj":"PR:000012225"},{"id":"T109","span":{"begin":259,"end":262},"obj":"PR:Q9CQX4"},{"id":"T108","span":{"begin":259,"end":262},"obj":"CVCL_XY57"},{"id":"T105","span":{"begin":259,"end":262},"obj":"CHEBI:52450"},{"id":"T106","span":{"begin":259,"end":262},"obj":"CHEBI:44811"},{"id":"T110","span":{"begin":279,"end":297},"obj":"D045726"},{"id":"T111","span":{"begin":299,"end":303},"obj":"D020782"},{"id":"T113","span":{"begin":332,"end":338},"obj":"813859"},{"id":"T112","span":{"begin":332,"end":338},"obj":"D011817"},{"id":"T114","span":{"begin":332,"end":338},"obj":"9986"},{"id":"T115","span":{"begin":400,"end":405},"obj":"CHEBI:30216"},{"id":"T116","span":{"begin":406,"end":419},"obj":"UBERON:0001135"},{"id":"T117","span":{"begin":406,"end":419},"obj":"UBERON:0000953"},{"id":"T120","span":{"begin":421,"end":426},"obj":"CHEBI:30216"},{"id":"T121","span":{"begin":431,"end":436},"obj":"P53491"},{"id":"T122","span":{"begin":431,"end":436},"obj":"P45520"},{"id":"T123","span":{"begin":431,"end":436},"obj":"O00937"},{"id":"T124","span":{"begin":431,"end":436},"obj":"Q05214"},{"id":"T125","span":{"begin":431,"end":436},"obj":"P13363"},{"id":"T126","span":{"begin":431,"end":436},"obj":"Q39596"},{"id":"T127","span":{"begin":431,"end":436},"obj":"P30161"},{"id":"T128","span":{"begin":431,"end":436},"obj":"P53476"},{"id":"T129","span":{"begin":431,"end":436},"obj":"P51775"},{"id":"T130","span":{"begin":431,"end":436},"obj":"P60011"},{"id":"T131","span":{"begin":431,"end":436},"obj":"Q9P4D1"},{"id":"T132","span":{"begin":431,"end":436},"obj":"P50138"},{"id":"T133","span":{"begin":431,"end":436},"obj":"O65314"},{"id":"T134","span":{"begin":431,"end":436},"obj":"P26183"},{"id":"T135","span":{"begin":431,"end":436},"obj":"Q75D00"},{"id":"T136","span":{"begin":431,"end":436},"obj":"P53502"},{"id":"T137","span":{"begin":431,"end":436},"obj":"P11426"},{"id":"T138","span":{"begin":431,"end":436},"obj":"P80709"},{"id":"T139","span":{"begin":431,"end":436},"obj":"Q8X119"},{"id":"T140","span":{"begin":431,"end":436},"obj":"Q6TCF2"},{"id":"T141","span":{"begin":431,"end":436},"obj":"Q99023"},{"id":"T142","span":{"begin":431,"end":436},"obj":"A5DQP9"},{"id":"T143","span":{"begin":431,"end":436},"obj":"P60009"},{"id":"T144","span":{"begin":431,"end":436},"obj":"O65315"},{"id":"T145","span":{"begin":431,"end":436},"obj":"P26182"},{"id":"T146","span":{"begin":431,"end":436},"obj":"Q9UVF3"},{"id":"T147","span":{"begin":431,"end":436},"obj":"Q2U7A3"},{"id":"T148","span":{"begin":431,"end":436},"obj":"Q92192"},{"id":"T149","span":{"begin":431,"end":436},"obj":"Q9UVZ8"},{"id":"T150","span":{"begin":431,"end":436},"obj":"P53689"},{"id":"T151","span":{"begin":431,"end":436},"obj":"P68555"},{"id":"T152","span":{"begin":431,"end":436},"obj":"P53455"},{"id":"T153","span":{"begin":431,"end":436},"obj":"O13419"},{"id":"T154","span":{"begin":431,"end":436},"obj":"P60010"},{"id":"T155","span":{"begin":431,"end":436},"obj":"Q39758"},{"id":"T156","span":{"begin":431,"end":436},"obj":"P81085"},{"id":"T157","span":{"begin":431,"end":436},"obj":"P48465"},{"id":"T158","span":{"begin":431,"end":436},"obj":"P78711"},{"id":"T159","span":{"begin":431,"end":436},"obj":"P17128"},{"id":"T160","span":{"begin":431,"end":436},"obj":"P91754"},{"id":"T161","span":{"begin":431,"end":436},"obj":"Q24733"},{"id":"T162","span":{"begin":431,"end":436},"obj":"P14235"},{"id":"T163","span":{"begin":431,"end":436},"obj":"Q92193"},{"id":"T164","span":{"begin":431,"end":436},"obj":"Q11212"},{"id":"T165","span":{"begin":431,"end":436},"obj":"P45521"},{"id":"T166","span":{"begin":431,"end":436},"obj":"P53477"},{"id":"T167","span":{"begin":431,"end":436},"obj":"P53499"},{"id":"T168","span":{"begin":431,"end":436},"obj":"P24902"},{"id":"T169","span":{"begin":431,"end":436},"obj":"Q8SWN8"},{"id":"T170","span":{"begin":431,"end":436},"obj":"O17320"},{"id":"T171","span":{"begin":431,"end":436},"obj":"P10365"},{"id":"T173","span":{"begin":431,"end":436},"obj":"O16808"},{"id":"T174","span":{"begin":431,"end":436},"obj":"P53498"},{"id":"T175","span":{"begin":431,"end":436},"obj":"Q9UVX4"},{"id":"T176","span":{"begin":431,"end":436},"obj":"O81221"},{"id":"T177","span":{"begin":431,"end":436},"obj":"P20904"},{"id":"T178","span":{"begin":431,"end":436},"obj":"O65316"},{"id":"T179","span":{"begin":431,"end":436},"obj":"O74258"},{"id":"T180","span":{"begin":431,"end":436},"obj":"P53500"},{"id":"T181","span":{"begin":431,"end":436},"obj":"P10989"},{"id":"T182","span":{"begin":431,"end":436},"obj":"P90689"},{"id":"T172","span":{"begin":431,"end":436},"obj":"D000199"},{"id":"T205","span":{"begin":438,"end":441},"obj":"CVCL_2501"},{"id":"T190","span":{"begin":438,"end":441},"obj":"GO:0047152"},{"id":"T199","span":{"begin":438,"end":441},"obj":"GO:0043791"},{"id":"T208","span":{"begin":438,"end":441},"obj":"GO:0043834"},{"id":"T224","span":{"begin":438,"end":445},"obj":"Q9XT90"},{"id":"T225","span":{"begin":438,"end":445},"obj":"P50281"},{"id":"T226","span":{"begin":438,"end":445},"obj":"Q9GLE4"},{"id":"T227","span":{"begin":438,"end":445},"obj":"PR:000010474"},{"id":"T228","span":{"begin":438,"end":445},"obj":"Q10739"},{"id":"T229","span":{"begin":438,"end":445},"obj":"Q95220"},{"id":"T231","span":{"begin":438,"end":445},"obj":"P53690"},{"id":"T230","span":{"begin":438,"end":445},"obj":"D053511"},{"id":"T234","span":{"begin":442,"end":445},"obj":"GO:0004235"},{"id":"T237","span":{"begin":447,"end":450},"obj":"CHEBI:340824"},{"id":"T240","span":{"begin":447,"end":450},"obj":"CHEBI:59761"},{"id":"T241","span":{"begin":447,"end":452},"obj":"PR:P08253"},{"id":"T242","span":{"begin":447,"end":452},"obj":"Q9GLE5"},{"id":"T243","span":{"begin":447,"end":452},"obj":"P08253"},{"id":"T244","span":{"begin":447,"end":452},"obj":"Q90611"},{"id":"T246","span":{"begin":447,"end":452},"obj":"PR:Q8MPP3"},{"id":"T247","span":{"begin":447,"end":452},"obj":"P33436"},{"id":"T248","span":{"begin":447,"end":452},"obj":"PR:Q90611"},{"id":"T249","span":{"begin":447,"end":452},"obj":"PR:P33436"},{"id":"T250","span":{"begin":447,"end":452},"obj":"PR:000010479"},{"id":"T251","span":{"begin":447,"end":452},"obj":"PR:P33434"},{"id":"T252","span":{"begin":447,"end":452},"obj":"P33434"},{"id":"T253","span":{"begin":447,"end":452},"obj":"P50757"},{"id":"T245","span":{"begin":447,"end":452},"obj":"GO:0004228"},{"id":"T254","span":{"begin":451,"end":457},"obj":"PR:O04529"},{"id":"T255","span":{"begin":454,"end":457},"obj":"CHEBI:340824"},{"id":"T258","span":{"begin":454,"end":457},"obj":"CHEBI:59761"},{"id":"T259","span":{"begin":454,"end":459},"obj":"PR:P50282"},{"id":"T260","span":{"begin":454,"end":459},"obj":"PR:P14780"},{"id":"T261","span":{"begin":454,"end":459},"obj":"P14780"},{"id":"T262","span":{"begin":454,"end":459},"obj":"PR:P41245"},{"id":"T263","span":{"begin":454,"end":459},"obj":"P41246"},{"id":"T264","span":{"begin":454,"end":459},"obj":"P41245"},{"id":"T265","span":{"begin":454,"end":459},"obj":"PR:P52176"},{"id":"T266","span":{"begin":454,"end":459},"obj":"P50282"},{"id":"T268","span":{"begin":454,"end":459},"obj":"PR:000010491"},{"id":"T269","span":{"begin":454,"end":459},"obj":"P52176"},{"id":"T270","span":{"begin":454,"end":459},"obj":"O18733"},{"id":"T267","span":{"begin":454,"end":459},"obj":"GO:0004229"},{"id":"T271","span":{"begin":465,"end":471},"obj":"UBERON:0000479"},{"id":"T272","span":{"begin":472,"end":481},"obj":"CHEBI:35222"},{"id":"T273","span":{"begin":485,"end":491},"obj":"UBERON:0027368"},{"id":"T278","span":{"begin":511,"end":518},"obj":"PR:P16035"},{"id":"T279","span":{"begin":511,"end":518},"obj":"PR:000016353"},{"id":"T280","span":{"begin":511,"end":518},"obj":"O42146"},{"id":"T281","span":{"begin":511,"end":518},"obj":"Q9TRZ7"},{"id":"T282","span":{"begin":511,"end":518},"obj":"Q9TTY1"},{"id":"T283","span":{"begin":511,"end":518},"obj":"Q60453"},{"id":"T284","span":{"begin":511,"end":518},"obj":"P16035"},{"id":"T286","span":{"begin":511,"end":518},"obj":"P25785"},{"id":"T287","span":{"begin":511,"end":518},"obj":"P16368"},{"id":"T288","span":{"begin":511,"end":518},"obj":"O77717"},{"id":"T289","span":{"begin":511,"end":518},"obj":"PR:P25785"},{"id":"T290","span":{"begin":511,"end":518},"obj":"P30121"},{"id":"T291","span":{"begin":511,"end":518},"obj":"Q9WUC6"},{"id":"T292","span":{"begin":511,"end":518},"obj":"PR:P30121"},{"id":"T293","span":{"begin":511,"end":518},"obj":"PR:O42146"},{"id":"T285","span":{"begin":511,"end":518},"obj":"D019716"},{"id":"T294","span":{"begin":587,"end":591},"obj":"C083283"},{"id":"T295","span":{"begin":587,"end":591},"obj":"C083283"},{"id":"T296","span":{"begin":613,"end":616},"obj":"PR:Q6RIA2"},{"id":"T297","span":{"begin":613,"end":616},"obj":"PR:Q15004"},{"id":"T300","span":{"begin":613,"end":616},"obj":"PR:000012225"},{"id":"T302","span":{"begin":613,"end":616},"obj":"PR:Q9CQX4"},{"id":"T301","span":{"begin":613,"end":616},"obj":"CVCL_XY57"},{"id":"T303","span":{"begin":613,"end":627},"obj":"CHEBI:134182"},{"id":"T305","span":{"begin":628,"end":636},"obj":"C066686"},{"id":"T306","span":{"begin":628,"end":636},"obj":"C066686"},{"id":"T307","span":{"begin":644,"end":649},"obj":"P09958"},{"id":"T308","span":{"begin":644,"end":649},"obj":"P23188"},{"id":"T309","span":{"begin":644,"end":649},"obj":"PR:000003137"},{"id":"T311","span":{"begin":644,"end":649},"obj":"PR:P09958"},{"id":"T312","span":{"begin":644,"end":649},"obj":"Q28193"},{"id":"T313","span":{"begin":644,"end":649},"obj":"PR:P23188"},{"id":"T314","span":{"begin":644,"end":649},"obj":"P23377"},{"id":"T315","span":{"begin":644,"end":649},"obj":"PR:P23377"},{"id":"T310","span":{"begin":644,"end":649},"obj":"D045683"},{"id":"T316","span":{"begin":650,"end":659},"obj":"CHEBI:35222"},{"id":"T317","span":{"begin":660,"end":664},"obj":"PR:Q04047"},{"id":"T318","span":{"begin":665,"end":670},"obj":"CHEBI:32693"},{"id":"T319","span":{"begin":665,"end":670},"obj":"CHEBI:32691"},{"id":"T320","span":{"begin":665,"end":670},"obj":"CHEBI:29953"},{"id":"T322","span":{"begin":667,"end":670},"obj":"PR:000013890"},{"id":"T324","span":{"begin":667,"end":670},"obj":"PR:P42684"},{"id":"T325","span":{"begin":667,"end":670},"obj":"PR:Q9P2R6"},{"id":"T327","span":{"begin":667,"end":670},"obj":"PR:Q4JIM5"},{"id":"T331","span":{"begin":667,"end":670},"obj":"PR:000003583"},{"id":"T321","span":{"begin":667,"end":670},"obj":"SO:0001451"},{"id":"T332","span":{"begin":667,"end":675},"obj":"C069339"},{"id":"T333","span":{"begin":667,"end":675},"obj":"C069339"},{"id":"T341","span":{"begin":678,"end":693},"obj":"GO:0010467"},{"id":"T342","span":{"begin":705,"end":710},"obj":"P09958"},{"id":"T343","span":{"begin":705,"end":710},"obj":"P23188"},{"id":"T344","span":{"begin":705,"end":710},"obj":"PR:000003137"},{"id":"T346","span":{"begin":705,"end":710},"obj":"PR:P09958"},{"id":"T347","span":{"begin":705,"end":710},"obj":"Q28193"},{"id":"T348","span":{"begin":705,"end":710},"obj":"PR:P23188"},{"id":"T349","span":{"begin":705,"end":710},"obj":"P23377"},{"id":"T350","span":{"begin":705,"end":710},"obj":"PR:P23377"},{"id":"T345","span":{"begin":705,"end":710},"obj":"D045683"},{"id":"T351","span":{"begin":712,"end":721},"obj":"D014568"},{"id":"T352","span":{"begin":712,"end":743},"obj":"GO:0008243"},{"id":"T371","span":{"begin":722,"end":743},"obj":"P17811"},{"id":"T372","span":{"begin":722,"end":743},"obj":"D010960"},{"id":"T373","span":{"begin":745,"end":748},"obj":"CHEBI:340824"},{"id":"T376","span":{"begin":745,"end":748},"obj":"CHEBI:59761"},{"id":"T377","span":{"begin":745,"end":750},"obj":"PR:P08253"},{"id":"T378","span":{"begin":745,"end":750},"obj":"Q9GLE5"},{"id":"T379","span":{"begin":745,"end":750},"obj":"P08253"},{"id":"T380","span":{"begin":745,"end":750},"obj":"Q90611"},{"id":"T382","span":{"begin":745,"end":750},"obj":"PR:Q8MPP3"},{"id":"T383","span":{"begin":745,"end":750},"obj":"P33436"},{"id":"T384","span":{"begin":745,"end":750},"obj":"PR:Q90611"},{"id":"T385","span":{"begin":745,"end":750},"obj":"PR:P33436"},{"id":"T386","span":{"begin":745,"end":750},"obj":"PR:000010479"},{"id":"T387","span":{"begin":745,"end":750},"obj":"PR:P33434"},{"id":"T388","span":{"begin":745,"end":750},"obj":"P33434"},{"id":"T389","span":{"begin":745,"end":750},"obj":"P50757"},{"id":"T381","span":{"begin":745,"end":750},"obj":"GO:0004228"},{"id":"T390","span":{"begin":749,"end":755},"obj":"PR:O04529"},{"id":"T391","span":{"begin":752,"end":755},"obj":"CHEBI:340824"},{"id":"T394","span":{"begin":752,"end":755},"obj":"CHEBI:59761"},{"id":"T395","span":{"begin":752,"end":757},"obj":"PR:P50282"},{"id":"T396","span":{"begin":752,"end":757},"obj":"PR:P14780"},{"id":"T397","span":{"begin":752,"end":757},"obj":"P14780"},{"id":"T398","span":{"begin":752,"end":757},"obj":"PR:P41245"},{"id":"T399","span":{"begin":752,"end":757},"obj":"P41246"},{"id":"T400","span":{"begin":752,"end":757},"obj":"P41245"},{"id":"T401","span":{"begin":752,"end":757},"obj":"PR:P52176"},{"id":"T402","span":{"begin":752,"end":757},"obj":"P50282"},{"id":"T404","span":{"begin":752,"end":757},"obj":"PR:000010491"},{"id":"T405","span":{"begin":752,"end":757},"obj":"P52176"},{"id":"T406","span":{"begin":752,"end":757},"obj":"O18733"},{"id":"T403","span":{"begin":752,"end":757},"obj":"GO:0004229"},{"id":"T429","span":{"begin":759,"end":762},"obj":"CVCL_2501"},{"id":"T414","span":{"begin":759,"end":762},"obj":"GO:0047152"},{"id":"T423","span":{"begin":759,"end":762},"obj":"GO:0043791"},{"id":"T432","span":{"begin":759,"end":762},"obj":"GO:0043834"},{"id":"T448","span":{"begin":759,"end":766},"obj":"Q9XT90"},{"id":"T449","span":{"begin":759,"end":766},"obj":"P50281"},{"id":"T450","span":{"begin":759,"end":766},"obj":"Q9GLE4"},{"id":"T451","span":{"begin":759,"end":766},"obj":"PR:000010474"},{"id":"T452","span":{"begin":759,"end":766},"obj":"Q10739"},{"id":"T453","span":{"begin":759,"end":766},"obj":"Q95220"},{"id":"T455","span":{"begin":759,"end":766},"obj":"P53690"},{"id":"T454","span":{"begin":759,"end":766},"obj":"D053511"},{"id":"T458","span":{"begin":763,"end":766},"obj":"GO:0004235"},{"id":"T465","span":{"begin":772,"end":778},"obj":"PR:P16035"},{"id":"T466","span":{"begin":772,"end":778},"obj":"PR:000016353"},{"id":"T467","span":{"begin":772,"end":778},"obj":"O42146"},{"id":"T468","span":{"begin":772,"end":778},"obj":"Q9TRZ7"},{"id":"T469","span":{"begin":772,"end":778},"obj":"Q9TTY1"},{"id":"T470","span":{"begin":772,"end":778},"obj":"Q60453"},{"id":"T471","span":{"begin":772,"end":778},"obj":"P16035"},{"id":"T473","span":{"begin":772,"end":778},"obj":"P25785"},{"id":"T474","span":{"begin":772,"end":778},"obj":"P16368"},{"id":"T475","span":{"begin":772,"end":778},"obj":"O77717"},{"id":"T476","span":{"begin":772,"end":778},"obj":"PR:P25785"},{"id":"T477","span":{"begin":772,"end":778},"obj":"P30121"},{"id":"T478","span":{"begin":772,"end":778},"obj":"Q9WUC6"},{"id":"T479","span":{"begin":772,"end":778},"obj":"PR:P30121"},{"id":"T480","span":{"begin":772,"end":778},"obj":"PR:O42146"},{"id":"T472","span":{"begin":772,"end":778},"obj":"D019716"},{"id":"T481","span":{"begin":808,"end":811},"obj":"Q41249"},{"id":"T482","span":{"begin":808,"end":811},"obj":"O66148"},{"id":"T483","span":{"begin":808,"end":811},"obj":"Q59987"},{"id":"T484","span":{"begin":808,"end":811},"obj":"Q01289"},{"id":"T485","span":{"begin":808,"end":811},"obj":"O80333"},{"id":"T486","span":{"begin":808,"end":811},"obj":"P15904"},{"id":"T487","span":{"begin":808,"end":811},"obj":"Q9SDT1"},{"id":"T488","span":{"begin":808,"end":811},"obj":"Q39617"},{"id":"T489","span":{"begin":813,"end":820},"obj":"CHEBI:16541"},{"id":"T490","span":{"begin":862,"end":865},"obj":"CHEBI:340824"},{"id":"T493","span":{"begin":862,"end":865},"obj":"CHEBI:59761"},{"id":"T494","span":{"begin":862,"end":867},"obj":"PR:P08253"},{"id":"T495","span":{"begin":862,"end":867},"obj":"Q9GLE5"},{"id":"T496","span":{"begin":862,"end":867},"obj":"P08253"},{"id":"T497","span":{"begin":862,"end":867},"obj":"Q90611"},{"id":"T499","span":{"begin":862,"end":867},"obj":"PR:Q8MPP3"},{"id":"T500","span":{"begin":862,"end":867},"obj":"P33436"},{"id":"T501","span":{"begin":862,"end":867},"obj":"PR:Q90611"},{"id":"T502","span":{"begin":862,"end":867},"obj":"PR:P33436"},{"id":"T503","span":{"begin":862,"end":867},"obj":"PR:000010479"},{"id":"T504","span":{"begin":862,"end":867},"obj":"PR:P33434"},{"id":"T505","span":{"begin":862,"end":867},"obj":"P33434"},{"id":"T506","span":{"begin":862,"end":867},"obj":"P50757"},{"id":"T498","span":{"begin":862,"end":867},"obj":"GO:0004228"},{"id":"T507","span":{"begin":902,"end":909},"obj":"4716"},{"id":"T508","span":{"begin":902,"end":909},"obj":"D005780"},{"id":"T509","span":{"begin":902,"end":909},"obj":"CHEBI:5291"},{"id":"T532","span":{"begin":929,"end":932},"obj":"CVCL_2501"},{"id":"T517","span":{"begin":929,"end":932},"obj":"GO:0047152"},{"id":"T526","span":{"begin":929,"end":932},"obj":"GO:0043791"},{"id":"T535","span":{"begin":929,"end":932},"obj":"GO:0043834"},{"id":"T551","span":{"begin":929,"end":936},"obj":"Q9XT90"},{"id":"T552","span":{"begin":929,"end":936},"obj":"P50281"},{"id":"T553","span":{"begin":929,"end":936},"obj":"Q9GLE4"},{"id":"T554","span":{"begin":929,"end":936},"obj":"PR:000010474"},{"id":"T555","span":{"begin":929,"end":936},"obj":"Q10739"},{"id":"T556","span":{"begin":929,"end":936},"obj":"Q95220"},{"id":"T558","span":{"begin":929,"end":936},"obj":"P53690"},{"id":"T557","span":{"begin":929,"end":936},"obj":"D053511"},{"id":"T561","span":{"begin":933,"end":936},"obj":"GO:0004235"},{"id":"T564","span":{"begin":977,"end":981},"obj":"C083283"},{"id":"T565","span":{"begin":977,"end":981},"obj":"C083283"},{"id":"T588","span":{"begin":1016,"end":1019},"obj":"CVCL_2501"},{"id":"T573","span":{"begin":1016,"end":1019},"obj":"GO:0047152"},{"id":"T582","span":{"begin":1016,"end":1019},"obj":"GO:0043791"},{"id":"T591","span":{"begin":1016,"end":1019},"obj":"GO:0043834"},{"id":"T607","span":{"begin":1016,"end":1023},"obj":"Q9XT90"},{"id":"T608","span":{"begin":1016,"end":1023},"obj":"P50281"},{"id":"T609","span":{"begin":1016,"end":1023},"obj":"Q9GLE4"},{"id":"T610","span":{"begin":1016,"end":1023},"obj":"PR:000010474"},{"id":"T611","span":{"begin":1016,"end":1023},"obj":"Q10739"},{"id":"T612","span":{"begin":1016,"end":1023},"obj":"Q95220"},{"id":"T614","span":{"begin":1016,"end":1023},"obj":"P53690"},{"id":"T613","span":{"begin":1016,"end":1023},"obj":"D053511"},{"id":"T617","span":{"begin":1020,"end":1023},"obj":"GO:0004235"},{"id":"T620","span":{"begin":1025,"end":1028},"obj":"CHEBI:340824"},{"id":"T623","span":{"begin":1025,"end":1028},"obj":"CHEBI:59761"},{"id":"T624","span":{"begin":1025,"end":1030},"obj":"PR:P08253"},{"id":"T625","span":{"begin":1025,"end":1030},"obj":"Q9GLE5"},{"id":"T626","span":{"begin":1025,"end":1030},"obj":"P08253"},{"id":"T627","span":{"begin":1025,"end":1030},"obj":"Q90611"},{"id":"T629","span":{"begin":1025,"end":1030},"obj":"PR:Q8MPP3"},{"id":"T630","span":{"begin":1025,"end":1030},"obj":"P33436"},{"id":"T631","span":{"begin":1025,"end":1030},"obj":"PR:Q90611"},{"id":"T632","span":{"begin":1025,"end":1030},"obj":"PR:P33436"},{"id":"T633","span":{"begin":1025,"end":1030},"obj":"PR:000010479"},{"id":"T634","span":{"begin":1025,"end":1030},"obj":"PR:P33434"},{"id":"T635","span":{"begin":1025,"end":1030},"obj":"P33434"},{"id":"T636","span":{"begin":1025,"end":1030},"obj":"P50757"},{"id":"T628","span":{"begin":1025,"end":1030},"obj":"GO:0004228"},{"id":"T637","span":{"begin":1029,"end":1035},"obj":"PR:O04529"},{"id":"T638","span":{"begin":1032,"end":1035},"obj":"CHEBI:340824"},{"id":"T641","span":{"begin":1032,"end":1035},"obj":"CHEBI:59761"},{"id":"T642","span":{"begin":1032,"end":1037},"obj":"PR:P50282"},{"id":"T643","span":{"begin":1032,"end":1037},"obj":"PR:P14780"},{"id":"T644","span":{"begin":1032,"end":1037},"obj":"P14780"},{"id":"T645","span":{"begin":1032,"end":1037},"obj":"PR:P41245"},{"id":"T646","span":{"begin":1032,"end":1037},"obj":"P41246"},{"id":"T647","span":{"begin":1032,"end":1037},"obj":"P41245"},{"id":"T648","span":{"begin":1032,"end":1037},"obj":"PR:P52176"},{"id":"T649","span":{"begin":1032,"end":1037},"obj":"P50282"},{"id":"T651","span":{"begin":1032,"end":1037},"obj":"PR:000010491"},{"id":"T652","span":{"begin":1032,"end":1037},"obj":"P52176"},{"id":"T653","span":{"begin":1032,"end":1037},"obj":"O18733"},{"id":"T650","span":{"begin":1032,"end":1037},"obj":"GO:0004229"},{"id":"T658","span":{"begin":1043,"end":1049},"obj":"PR:P16035"},{"id":"T659","span":{"begin":1043,"end":1049},"obj":"PR:000016353"},{"id":"T660","span":{"begin":1043,"end":1049},"obj":"O42146"},{"id":"T661","span":{"begin":1043,"end":1049},"obj":"Q9TRZ7"},{"id":"T662","span":{"begin":1043,"end":1049},"obj":"Q9TTY1"},{"id":"T663","span":{"begin":1043,"end":1049},"obj":"Q60453"},{"id":"T664","span":{"begin":1043,"end":1049},"obj":"P16035"},{"id":"T666","span":{"begin":1043,"end":1049},"obj":"P25785"},{"id":"T667","span":{"begin":1043,"end":1049},"obj":"P16368"},{"id":"T668","span":{"begin":1043,"end":1049},"obj":"O77717"},{"id":"T669","span":{"begin":1043,"end":1049},"obj":"PR:P25785"},{"id":"T670","span":{"begin":1043,"end":1049},"obj":"P30121"},{"id":"T671","span":{"begin":1043,"end":1049},"obj":"Q9WUC6"},{"id":"T672","span":{"begin":1043,"end":1049},"obj":"PR:P30121"},{"id":"T673","span":{"begin":1043,"end":1049},"obj":"PR:O42146"},{"id":"T665","span":{"begin":1043,"end":1049},"obj":"D019716"},{"id":"T676","span":{"begin":1050,"end":1054},"obj":"SO:0000234"},{"id":"T674","span":{"begin":1050,"end":1054},"obj":"D012333"},{"id":"T675","span":{"begin":1050,"end":1054},"obj":"CHEBI:33699"},{"id":"T699","span":{"begin":1096,"end":1099},"obj":"CVCL_2501"},{"id":"T684","span":{"begin":1096,"end":1099},"obj":"GO:0047152"},{"id":"T693","span":{"begin":1096,"end":1099},"obj":"GO:0043791"},{"id":"T702","span":{"begin":1096,"end":1099},"obj":"GO:0043834"},{"id":"T718","span":{"begin":1096,"end":1103},"obj":"Q9XT90"},{"id":"T719","span":{"begin":1096,"end":1103},"obj":"P50281"},{"id":"T720","span":{"begin":1096,"end":1103},"obj":"Q9GLE4"},{"id":"T721","span":{"begin":1096,"end":1103},"obj":"PR:000010474"},{"id":"T722","span":{"begin":1096,"end":1103},"obj":"Q10739"},{"id":"T723","span":{"begin":1096,"end":1103},"obj":"Q95220"},{"id":"T725","span":{"begin":1096,"end":1103},"obj":"P53690"},{"id":"T724","span":{"begin":1096,"end":1103},"obj":"D053511"},{"id":"T728","span":{"begin":1100,"end":1103},"obj":"GO:0004235"},{"id":"T731","span":{"begin":1104,"end":1111},"obj":"GO:0003675"},{"id":"T735","span":{"begin":1104,"end":1111},"obj":"SO:0000104"},{"id":"T734","span":{"begin":1104,"end":1111},"obj":"PR:000000001"},{"id":"T732","span":{"begin":1104,"end":1111},"obj":"CHEBI:36080"},{"id":"T733","span":{"begin":1104,"end":1111},"obj":"CHEBI:11122"},{"id":"T740","span":{"begin":1144,"end":1150},"obj":"PR:P16035"},{"id":"T741","span":{"begin":1144,"end":1150},"obj":"PR:000016353"},{"id":"T742","span":{"begin":1144,"end":1150},"obj":"O42146"},{"id":"T743","span":{"begin":1144,"end":1150},"obj":"Q9TRZ7"},{"id":"T744","span":{"begin":1144,"end":1150},"obj":"Q9TTY1"},{"id":"T745","span":{"begin":1144,"end":1150},"obj":"Q60453"},{"id":"T746","span":{"begin":1144,"end":1150},"obj":"P16035"},{"id":"T748","span":{"begin":1144,"end":1150},"obj":"P25785"},{"id":"T749","span":{"begin":1144,"end":1150},"obj":"P16368"},{"id":"T750","span":{"begin":1144,"end":1150},"obj":"O77717"},{"id":"T751","span":{"begin":1144,"end":1150},"obj":"PR:P25785"},{"id":"T752","span":{"begin":1144,"end":1150},"obj":"P30121"},{"id":"T753","span":{"begin":1144,"end":1150},"obj":"Q9WUC6"},{"id":"T754","span":{"begin":1144,"end":1150},"obj":"PR:P30121"},{"id":"T755","span":{"begin":1144,"end":1150},"obj":"PR:O42146"},{"id":"T747","span":{"begin":1144,"end":1150},"obj":"D019716"},{"id":"T756","span":{"begin":1151,"end":1158},"obj":"GO:0003675"},{"id":"T760","span":{"begin":1151,"end":1158},"obj":"SO:0000104"},{"id":"T759","span":{"begin":1151,"end":1158},"obj":"PR:000000001"},{"id":"T757","span":{"begin":1151,"end":1158},"obj":"CHEBI:36080"},{"id":"T758","span":{"begin":1151,"end":1158},"obj":"CHEBI:11122"},{"id":"T762","span":{"begin":1182,"end":1185},"obj":"PR:Q6RIA2"},{"id":"T763","span":{"begin":1182,"end":1185},"obj":"PR:Q15004"},{"id":"T766","span":{"begin":1182,"end":1185},"obj":"PR:000012225"},{"id":"T768","span":{"begin":1182,"end":1185},"obj":"PR:Q9CQX4"},{"id":"T767","span":{"begin":1182,"end":1185},"obj":"CVCL_XY57"},{"id":"T764","span":{"begin":1182,"end":1185},"obj":"CHEBI:52450"},{"id":"T765","span":{"begin":1182,"end":1185},"obj":"CHEBI:44811"},{"id":"T769","span":{"begin":1199,"end":1204},"obj":"P09958"},{"id":"T770","span":{"begin":1199,"end":1204},"obj":"P23188"},{"id":"T771","span":{"begin":1199,"end":1204},"obj":"PR:000003137"},{"id":"T773","span":{"begin":1199,"end":1204},"obj":"PR:P09958"},{"id":"T774","span":{"begin":1199,"end":1204},"obj":"Q28193"},{"id":"T775","span":{"begin":1199,"end":1204},"obj":"PR:P23188"},{"id":"T776","span":{"begin":1199,"end":1204},"obj":"P23377"},{"id":"T777","span":{"begin":1199,"end":1204},"obj":"PR:P23377"},{"id":"T772","span":{"begin":1199,"end":1204},"obj":"D045683"},{"id":"T778","span":{"begin":1205,"end":1209},"obj":"SO:0000704"},{"id":"T779","span":{"begin":1205,"end":1220},"obj":"GO:0010467"},{"id":"T780","span":{"begin":1244,"end":1251},"obj":"GO:0003675"},{"id":"T784","span":{"begin":1244,"end":1251},"obj":"SO:0000104"},{"id":"T783","span":{"begin":1244,"end":1251},"obj":"PR:000000001"},{"id":"T781","span":{"begin":1244,"end":1251},"obj":"CHEBI:36080"},{"id":"T782","span":{"begin":1244,"end":1251},"obj":"CHEBI:11122"},{"id":"T785","span":{"begin":1264,"end":1268},"obj":"PR:Q04047"},{"id":"T786","span":{"begin":1269,"end":1274},"obj":"CHEBI:32693"},{"id":"T787","span":{"begin":1269,"end":1274},"obj":"CHEBI:32691"},{"id":"T788","span":{"begin":1269,"end":1274},"obj":"CHEBI:29953"},{"id":"T790","span":{"begin":1271,"end":1274},"obj":"PR:000013890"},{"id":"T792","span":{"begin":1271,"end":1274},"obj":"PR:P42684"},{"id":"T793","span":{"begin":1271,"end":1274},"obj":"PR:Q9P2R6"},{"id":"T795","span":{"begin":1271,"end":1274},"obj":"PR:Q4JIM5"},{"id":"T799","span":{"begin":1271,"end":1274},"obj":"PR:000003583"},{"id":"T789","span":{"begin":1271,"end":1274},"obj":"SO:0001451"},{"id":"T800","span":{"begin":1271,"end":1279},"obj":"C069339"},{"id":"T801","span":{"begin":1271,"end":1279},"obj":"C069339"},{"id":"T809","span":{"begin":1289,"end":1293},"obj":"C083283"},{"id":"T810","span":{"begin":1289,"end":1293},"obj":"C083283"},{"id":"T818","span":{"begin":1307,"end":1310},"obj":"GO:0047152"},{"id":"T827","span":{"begin":1307,"end":1310},"obj":"GO:0043791"},{"id":"T836","span":{"begin":1307,"end":1310},"obj":"GO:0043834"},{"id":"T833","span":{"begin":1307,"end":1310},"obj":"CVCL_2501"},{"id":"T852","span":{"begin":1307,"end":1314},"obj":"Q9XT90"},{"id":"T853","span":{"begin":1307,"end":1314},"obj":"P50281"},{"id":"T854","span":{"begin":1307,"end":1314},"obj":"Q9GLE4"},{"id":"T855","span":{"begin":1307,"end":1314},"obj":"PR:000010474"},{"id":"T856","span":{"begin":1307,"end":1314},"obj":"Q10739"},{"id":"T857","span":{"begin":1307,"end":1314},"obj":"Q95220"},{"id":"T859","span":{"begin":1307,"end":1314},"obj":"P53690"},{"id":"T858","span":{"begin":1307,"end":1314},"obj":"D053511"},{"id":"T862","span":{"begin":1311,"end":1314},"obj":"GO:0004235"},{"id":"T867","span":{"begin":1325,"end":1328},"obj":"CHEBI:52450"},{"id":"T868","span":{"begin":1325,"end":1328},"obj":"CHEBI:44811"},{"id":"T865","span":{"begin":1325,"end":1328},"obj":"PR:Q6RIA2"},{"id":"T866","span":{"begin":1325,"end":1328},"obj":"PR:Q15004"},{"id":"T869","span":{"begin":1325,"end":1328},"obj":"PR:000012225"},{"id":"T871","span":{"begin":1325,"end":1328},"obj":"PR:Q9CQX4"},{"id":"T870","span":{"begin":1325,"end":1328},"obj":"CVCL_XY57"},{"id":"T872","span":{"begin":1376,"end":1379},"obj":"CHEBI:340824"},{"id":"T875","span":{"begin":1376,"end":1379},"obj":"CHEBI:59761"},{"id":"T876","span":{"begin":1376,"end":1381},"obj":"PR:P50282"},{"id":"T877","span":{"begin":1376,"end":1381},"obj":"PR:P14780"},{"id":"T878","span":{"begin":1376,"end":1381},"obj":"P14780"},{"id":"T879","span":{"begin":1376,"end":1381},"obj":"PR:P41245"},{"id":"T880","span":{"begin":1376,"end":1381},"obj":"P41246"},{"id":"T881","span":{"begin":1376,"end":1381},"obj":"P41245"},{"id":"T882","span":{"begin":1376,"end":1381},"obj":"PR:P52176"},{"id":"T883","span":{"begin":1376,"end":1381},"obj":"P50282"},{"id":"T885","span":{"begin":1376,"end":1381},"obj":"PR:000010491"},{"id":"T886","span":{"begin":1376,"end":1381},"obj":"P52176"},{"id":"T887","span":{"begin":1376,"end":1381},"obj":"O18733"},{"id":"T884","span":{"begin":1376,"end":1381},"obj":"GO:0004229"},{"id":"T892","span":{"begin":1382,"end":1389},"obj":"SO:0000104"},{"id":"T889","span":{"begin":1382,"end":1389},"obj":"CHEBI:36080"},{"id":"T890","span":{"begin":1382,"end":1389},"obj":"CHEBI:11122"},{"id":"T891","span":{"begin":1382,"end":1389},"obj":"PR:000000001"},{"id":"T888","span":{"begin":1382,"end":1389},"obj":"GO:0003675"},{"id":"T893","span":{"begin":1405,"end":1408},"obj":"CHEBI:340824"},{"id":"T896","span":{"begin":1405,"end":1408},"obj":"CHEBI:59761"},{"id":"T897","span":{"begin":1405,"end":1410},"obj":"PR:P08253"},{"id":"T898","span":{"begin":1405,"end":1410},"obj":"Q9GLE5"},{"id":"T899","span":{"begin":1405,"end":1410},"obj":"P08253"},{"id":"T900","span":{"begin":1405,"end":1410},"obj":"Q90611"},{"id":"T902","span":{"begin":1405,"end":1410},"obj":"PR:Q8MPP3"},{"id":"T903","span":{"begin":1405,"end":1410},"obj":"P33436"},{"id":"T904","span":{"begin":1405,"end":1410},"obj":"PR:Q90611"},{"id":"T905","span":{"begin":1405,"end":1410},"obj":"PR:P33436"},{"id":"T906","span":{"begin":1405,"end":1410},"obj":"PR:000010479"},{"id":"T907","span":{"begin":1405,"end":1410},"obj":"PR:P33434"},{"id":"T908","span":{"begin":1405,"end":1410},"obj":"P33434"},{"id":"T909","span":{"begin":1405,"end":1410},"obj":"P50757"},{"id":"T901","span":{"begin":1405,"end":1410},"obj":"GO:0004228"},{"id":"T910","span":{"begin":1439,"end":1447},"obj":"C066686"},{"id":"T911","span":{"begin":1439,"end":1447},"obj":"C066686"},{"id":"T912","span":{"begin":1456,"end":1459},"obj":"PR:Q6RIA2"},{"id":"T913","span":{"begin":1456,"end":1459},"obj":"PR:Q15004"},{"id":"T916","span":{"begin":1456,"end":1459},"obj":"PR:000012225"},{"id":"T918","span":{"begin":1456,"end":1459},"obj":"PR:Q9CQX4"},{"id":"T917","span":{"begin":1456,"end":1459},"obj":"CVCL_XY57"},{"id":"T914","span":{"begin":1456,"end":1459},"obj":"CHEBI:52450"},{"id":"T915","span":{"begin":1456,"end":1459},"obj":"CHEBI:44811"},{"id":"T919","span":{"begin":1468,"end":1481},"obj":"GO:0006351"},{"id":"T920","span":{"begin":1486,"end":1497},"obj":"GO:0006412"},{"id":"T921","span":{"begin":1507,"end":1515},"obj":"CHEBI:36080"},{"id":"T922","span":{"begin":1530,"end":1533},"obj":"PR:Q6RIA2"},{"id":"T923","span":{"begin":1530,"end":1533},"obj":"PR:Q15004"},{"id":"T926","span":{"begin":1530,"end":1533},"obj":"PR:000012225"},{"id":"T928","span":{"begin":1530,"end":1533},"obj":"PR:Q9CQX4"},{"id":"T927","span":{"begin":1530,"end":1533},"obj":"CVCL_XY57"},{"id":"T924","span":{"begin":1530,"end":1533},"obj":"CHEBI:52450"},{"id":"T925","span":{"begin":1530,"end":1533},"obj":"CHEBI:44811"},{"id":"T929","span":{"begin":1604,"end":1609},"obj":"P09958"},{"id":"T930","span":{"begin":1604,"end":1609},"obj":"P23188"},{"id":"T931","span":{"begin":1604,"end":1609},"obj":"PR:000003137"},{"id":"T933","span":{"begin":1604,"end":1609},"obj":"PR:P09958"},{"id":"T934","span":{"begin":1604,"end":1609},"obj":"Q28193"},{"id":"T935","span":{"begin":1604,"end":1609},"obj":"PR:P23188"},{"id":"T936","span":{"begin":1604,"end":1609},"obj":"P23377"},{"id":"T937","span":{"begin":1604,"end":1609},"obj":"PR:P23377"},{"id":"T932","span":{"begin":1604,"end":1609},"obj":"D045683"},{"id":"T940","span":{"begin":1611,"end":1614},"obj":"PR:O04529"},{"id":"T938","span":{"begin":1611,"end":1614},"obj":"CHEBI:340824"},{"id":"T941","span":{"begin":1611,"end":1614},"obj":"CHEBI:59761"},{"id":"T939","span":{"begin":1611,"end":1614},"obj":"GO:0004235"},{"id":"T946","span":{"begin":1620,"end":1626},"obj":"PR:P16035"},{"id":"T947","span":{"begin":1620,"end":1626},"obj":"PR:000016353"},{"id":"T948","span":{"begin":1620,"end":1626},"obj":"O42146"},{"id":"T949","span":{"begin":1620,"end":1626},"obj":"Q9TRZ7"},{"id":"T950","span":{"begin":1620,"end":1626},"obj":"Q9TTY1"},{"id":"T951","span":{"begin":1620,"end":1626},"obj":"Q60453"},{"id":"T952","span":{"begin":1620,"end":1626},"obj":"P16035"},{"id":"T954","span":{"begin":1620,"end":1626},"obj":"P25785"},{"id":"T955","span":{"begin":1620,"end":1626},"obj":"P16368"},{"id":"T956","span":{"begin":1620,"end":1626},"obj":"O77717"},{"id":"T957","span":{"begin":1620,"end":1626},"obj":"PR:P25785"},{"id":"T958","span":{"begin":1620,"end":1626},"obj":"P30121"},{"id":"T959","span":{"begin":1620,"end":1626},"obj":"Q9WUC6"},{"id":"T960","span":{"begin":1620,"end":1626},"obj":"PR:P30121"},{"id":"T961","span":{"begin":1620,"end":1626},"obj":"PR:O42146"},{"id":"T953","span":{"begin":1620,"end":1626},"obj":"D019716"},{"id":"T962","span":{"begin":1665,"end":1668},"obj":"CHEBI:340824"},{"id":"T965","span":{"begin":1665,"end":1668},"obj":"CHEBI:59761"},{"id":"T966","span":{"begin":1665,"end":1670},"obj":"PR:P08253"},{"id":"T967","span":{"begin":1665,"end":1670},"obj":"Q9GLE5"},{"id":"T968","span":{"begin":1665,"end":1670},"obj":"P08253"},{"id":"T969","span":{"begin":1665,"end":1670},"obj":"Q90611"},{"id":"T971","span":{"begin":1665,"end":1670},"obj":"PR:Q8MPP3"},{"id":"T972","span":{"begin":1665,"end":1670},"obj":"P33436"},{"id":"T973","span":{"begin":1665,"end":1670},"obj":"PR:Q90611"},{"id":"T974","span":{"begin":1665,"end":1670},"obj":"PR:P33436"},{"id":"T975","span":{"begin":1665,"end":1670},"obj":"PR:000010479"},{"id":"T976","span":{"begin":1665,"end":1670},"obj":"PR:P33434"},{"id":"T977","span":{"begin":1665,"end":1670},"obj":"P33434"},{"id":"T978","span":{"begin":1665,"end":1670},"obj":"P50757"},{"id":"T970","span":{"begin":1665,"end":1670},"obj":"GO:0004228"},{"id":"T979","span":{"begin":1697,"end":1700},"obj":"PR:Q6RIA2"},{"id":"T980","span":{"begin":1697,"end":1700},"obj":"PR:Q15004"},{"id":"T983","span":{"begin":1697,"end":1700},"obj":"PR:000012225"},{"id":"T985","span":{"begin":1697,"end":1700},"obj":"PR:Q9CQX4"},{"id":"T984","span":{"begin":1697,"end":1700},"obj":"CVCL_XY57"},{"id":"T981","span":{"begin":1697,"end":1700},"obj":"CHEBI:52450"},{"id":"T982","span":{"begin":1697,"end":1700},"obj":"CHEBI:44811"},{"id":"T986","span":{"begin":1780,"end":1783},"obj":"PR:Q6RIA2"},{"id":"T987","span":{"begin":1780,"end":1783},"obj":"PR:Q15004"},{"id":"T990","span":{"begin":1780,"end":1783},"obj":"PR:000012225"},{"id":"T992","span":{"begin":1780,"end":1783},"obj":"PR:Q9CQX4"},{"id":"T991","span":{"begin":1780,"end":1783},"obj":"CVCL_XY57"},{"id":"T988","span":{"begin":1780,"end":1783},"obj":"CHEBI:52450"},{"id":"T989","span":{"begin":1780,"end":1783},"obj":"CHEBI:44811"},{"id":"T1015","span":{"begin":1798,"end":1801},"obj":"CVCL_2501"},{"id":"T1000","span":{"begin":1798,"end":1801},"obj":"GO:0047152"},{"id":"T1009","span":{"begin":1798,"end":1801},"obj":"GO:0043791"},{"id":"T1018","span":{"begin":1798,"end":1801},"obj":"GO:0043834"},{"id":"T1034","span":{"begin":1798,"end":1805},"obj":"Q9XT90"},{"id":"T1035","span":{"begin":1798,"end":1805},"obj":"P50281"},{"id":"T1036","span":{"begin":1798,"end":1805},"obj":"Q9GLE4"},{"id":"T1037","span":{"begin":1798,"end":1805},"obj":"PR:000010474"},{"id":"T1038","span":{"begin":1798,"end":1805},"obj":"Q10739"},{"id":"T1039","span":{"begin":1798,"end":1805},"obj":"Q95220"},{"id":"T1041","span":{"begin":1798,"end":1805},"obj":"P53690"},{"id":"T1040","span":{"begin":1798,"end":1805},"obj":"D053511"},{"id":"T1044","span":{"begin":1802,"end":1805},"obj":"GO:0004235"},{"id":"T1047","span":{"begin":1824,"end":1827},"obj":"CHEBI:340824"},{"id":"T1050","span":{"begin":1824,"end":1827},"obj":"CHEBI:59761"},{"id":"T1051","span":{"begin":1824,"end":1829},"obj":"PR:P08253"},{"id":"T1052","span":{"begin":1824,"end":1829},"obj":"Q9GLE5"},{"id":"T1053","span":{"begin":1824,"end":1829},"obj":"P08253"},{"id":"T1054","span":{"begin":1824,"end":1829},"obj":"Q90611"},{"id":"T1056","span":{"begin":1824,"end":1829},"obj":"PR:Q8MPP3"},{"id":"T1057","span":{"begin":1824,"end":1829},"obj":"P33436"},{"id":"T1058","span":{"begin":1824,"end":1829},"obj":"PR:Q90611"},{"id":"T1059","span":{"begin":1824,"end":1829},"obj":"PR:P33436"},{"id":"T1060","span":{"begin":1824,"end":1829},"obj":"PR:000010479"},{"id":"T1061","span":{"begin":1824,"end":1829},"obj":"PR:P33434"},{"id":"T1062","span":{"begin":1824,"end":1829},"obj":"P33434"},{"id":"T1063","span":{"begin":1824,"end":1829},"obj":"P50757"},{"id":"T1055","span":{"begin":1824,"end":1829},"obj":"GO:0004228"},{"id":"T1066","span":{"begin":1872,"end":1875},"obj":"CHEBI:52450"},{"id":"T1067","span":{"begin":1872,"end":1875},"obj":"CHEBI:44811"},{"id":"T1064","span":{"begin":1872,"end":1875},"obj":"PR:Q6RIA2"},{"id":"T1065","span":{"begin":1872,"end":1875},"obj":"PR:Q15004"},{"id":"T1068","span":{"begin":1872,"end":1875},"obj":"PR:000012225"},{"id":"T1070","span":{"begin":1872,"end":1875},"obj":"PR:Q9CQX4"},{"id":"T1069","span":{"begin":1872,"end":1875},"obj":"CVCL_XY57"},{"id":"T1072","span":{"begin":1896,"end":1916},"obj":"GO:0031012"},{"id":"T1073","span":{"begin":1910,"end":1916},"obj":"UBERON:0027368"},{"id":"T1074","span":{"begin":2005,"end":2013},"obj":"D002921"},{"id":"T1075","span":{"begin":2005,"end":2013},"obj":"D002921"},{"id":"T1076","span":{"begin":2033,"end":2036},"obj":"PR:Q6RIA2"},{"id":"T1077","span":{"begin":2033,"end":2036},"obj":"PR:Q15004"},{"id":"T1080","span":{"begin":2033,"end":2036},"obj":"PR:000012225"},{"id":"T1082","span":{"begin":2033,"end":2036},"obj":"PR:Q9CQX4"},{"id":"T1081","span":{"begin":2033,"end":2036},"obj":"CVCL_XY57"},{"id":"T1083","span":{"begin":2033,"end":2048},"obj":"CHEBI:134182"}],"text":"PAF-induced furin and MT1-MMP expression is independent of MMP-2 activation in corneal myofibroblasts.\nPURPOSE: Corneal stromal myofibroblasts express the platelet-activating factor (PAF) receptor, but its role is unclear. In the present study, the effect of PAF on induction of metalloproteinases (MMPs) was investigated.\nMETHODS: Rabbit corneal myofibroblasts were identified by immunodetection of alpha-smooth muscle (alpha-SM)-actin. MT1-MMP, MMP-2, MMP-9, and tissue inhibitor of matrix metalloproteinase (TIMP)-2 were detected by immunofluorescence. Cells were treated with 100 nM cPAF, with or without the PAF antagonist BN 50730 or the furin inhibitor nona-D-arg-NH(2). Gene-expression levels for furin, urokinase plasminogen activator, MMP-2, MMP-9, MT1-MMP, and TIMP-2 were determined by real-time PCR. Protein expression was assessed by Western blot. MMP-2 and -9 activity was determined by gelatin zymography. Active MT1-MMP levels were measured by ELISA.\nRESULTS: cPAF triggered significantly increased MT1-MMP, MMP-2, MMP-9, and TIMP-2 mRNA expression, followed by increased active MT1-MMP protein expression at 12 hours, whereas TIMP-2 protein increased at 24 hours. PAF also induced furin gene expression, followed by increased protein expression. Nona-D-arg-NH(2) blocked cPAF induction of MT1-MMP activity. PAF-treated myofibroblasts showed increased active MMP-9 protein, but unchanged MMP-2 activity. Pretreatment with BN 50730 blocked PAF-induced transcription and translation of these proteins.\nCONCLUSIONS: PAF, through a receptor-mediated mechanism, induces a specific pattern of furin, MMP, and TIMP-2 expression in corneal myofibroblasts. MMP-2 activity was unchanged by PAF treatment. These results suggest that in response to the inflammatory mediator PAF, induction of MT1-MMP is independent of MMP-2 activity in corneal myofibroblasts. Thus, PAF-mediated changes in extracellular matrix composition surrounding the myofibroblasts could be important in regulating the corneal scarring process. Moreover, PAF antagonists could be useful in maintaining corneal transparency."}
UseCases_ArguminSci_Discourse
{"project":"UseCases_ArguminSci_Discourse","denotations":[{"id":"T1","span":{"begin":0,"end":102},"obj":"DRI_Approach"},{"id":"T2","span":{"begin":112,"end":222},"obj":"DRI_Outcome"},{"id":"T3","span":{"begin":223,"end":322},"obj":"DRI_Background"},{"id":"T4","span":{"begin":332,"end":437},"obj":"DRI_Background"},{"id":"T5","span":{"begin":438,"end":555},"obj":"DRI_Background"},{"id":"T6","span":{"begin":556,"end":677},"obj":"DRI_Approach"},{"id":"T7","span":{"begin":678,"end":812},"obj":"DRI_Background"},{"id":"T8","span":{"begin":813,"end":861},"obj":"DRI_Background"},{"id":"T9","span":{"begin":862,"end":921},"obj":"DRI_Unspecified"},{"id":"T10","span":{"begin":922,"end":967},"obj":"DRI_Background"},{"id":"T11","span":{"begin":977,"end":1181},"obj":"DRI_Background"},{"id":"T12","span":{"begin":1182,"end":1263},"obj":"DRI_Background"},{"id":"T13","span":{"begin":1264,"end":1324},"obj":"DRI_Unspecified"},{"id":"T14","span":{"begin":1325,"end":1336},"obj":"REPLACED"},{"id":"T15","span":{"begin":1337,"end":1351},"obj":"Token_Label.OUTSIDE"},{"id":"T16","span":{"begin":1352,"end":1420},"obj":"DRI_Unspecified"},{"id":"T17","span":{"begin":1421,"end":1516},"obj":"DRI_Background"},{"id":"T18","span":{"begin":1530,"end":1664},"obj":"DRI_Approach"},{"id":"T19","span":{"begin":1665,"end":1711},"obj":"DRI_Unspecified"},{"id":"T20","span":{"begin":1712,"end":1865},"obj":"DRI_Challenge"},{"id":"T21","span":{"begin":1866,"end":2022},"obj":"DRI_Approach"},{"id":"T22","span":{"begin":2023,"end":2101},"obj":"DRI_Outcome"}],"text":"PAF-induced furin and MT1-MMP expression is independent of MMP-2 activation in corneal myofibroblasts.\nPURPOSE: Corneal stromal myofibroblasts express the platelet-activating factor (PAF) receptor, but its role is unclear. In the present study, the effect of PAF on induction of metalloproteinases (MMPs) was investigated.\nMETHODS: Rabbit corneal myofibroblasts were identified by immunodetection of alpha-smooth muscle (alpha-SM)-actin. MT1-MMP, MMP-2, MMP-9, and tissue inhibitor of matrix metalloproteinase (TIMP)-2 were detected by immunofluorescence. Cells were treated with 100 nM cPAF, with or without the PAF antagonist BN 50730 or the furin inhibitor nona-D-arg-NH(2). Gene-expression levels for furin, urokinase plasminogen activator, MMP-2, MMP-9, MT1-MMP, and TIMP-2 were determined by real-time PCR. Protein expression was assessed by Western blot. MMP-2 and -9 activity was determined by gelatin zymography. Active MT1-MMP levels were measured by ELISA.\nRESULTS: cPAF triggered significantly increased MT1-MMP, MMP-2, MMP-9, and TIMP-2 mRNA expression, followed by increased active MT1-MMP protein expression at 12 hours, whereas TIMP-2 protein increased at 24 hours. PAF also induced furin gene expression, followed by increased protein expression. Nona-D-arg-NH(2) blocked cPAF induction of MT1-MMP activity. PAF-treated myofibroblasts showed increased active MMP-9 protein, but unchanged MMP-2 activity. Pretreatment with BN 50730 blocked PAF-induced transcription and translation of these proteins.\nCONCLUSIONS: PAF, through a receptor-mediated mechanism, induces a specific pattern of furin, MMP, and TIMP-2 expression in corneal myofibroblasts. MMP-2 activity was unchanged by PAF treatment. These results suggest that in response to the inflammatory mediator PAF, induction of MT1-MMP is independent of MMP-2 activity in corneal myofibroblasts. Thus, PAF-mediated changes in extracellular matrix composition surrounding the myofibroblasts could be important in regulating the corneal scarring process. Moreover, PAF antagonists could be useful in maintaining corneal transparency."}