PubMed:15471865 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/15471865","sourcedb":"PubMed","sourceid":"15471865","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/15471865","text":"A novel missense mutation in the sodium bicarbonate cotransporter (NBCe1/SLC4A4) causes proximal tubular acidosis and glaucoma through ion transport defects.\nIn humans and terrestrial vertebrates, the kidney controls systemic pH in part by absorbing filtered bicarbonate in the proximal tubule via an electrogenic Na+/HCO3- cotransporter (NBCe1/SLC4A4). Recently, human genetics revealed that NBCe1 is the major renal contributor to this process. Homozygous point mutations in NBCe1 cause proximal renal tubular acidosis (pRTA), glaucoma, and cataracts (Igarashi, T., Inatomi, J., Sekine, T., Cha, S. H., Kanai, Y., Kunimi, M., Tsukamoto, K., Satoh, H., Shimadzu, M., Tozawa, F., Mori, T., Shiobara, M., Seki, G., and Endou, H. (1999) Nat. Genet. 23, 264-266). We have identified and functionally characterized a novel, homozygous, missense mutation (S427L) in NBCe1, also resulting in pRTA and similar eye defects without mental retardation. To understand the pathophysiology of the syndrome, we expressed wild-type (WT) NBCe1 and S427L-NBCe1 in Xenopus oocytes. Function was evaluated by measuring intracellular pH (HCO3- transport) and membrane currents using microelectrodes. HCO3- -elicited currents for S427L were approximately 10% of WT NBCe1, and CO2-induced acidification was approximately 4-fold faster. Na+ -dependent HCO3- transport (currents and acidification) was also approximately 10% of WT. Current-voltage (I-V) analysis reveals that S427L has no reversal potential in HCO3-, indicating that under physiological ion gradient conditions, NaHCO3 could not move out of cells as is needed for renal HCO3- absorption and ocular pressure homeostasis. I-V analysis without Na+ further shows that the S427L-mediated NaHCO3 efflux mode is depressed or absent. These experiments reveal that voltage- and Na+ -dependent transport by S427L-hkNBCe1 is unfavorably altered, thereby causing both insufficient HCO3- absorption by the kidney (proximal RTA) and inappropriate anterior chamber fluid transport (glaucoma).","tracks":[{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":88,"end":96},"obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"T2","span":{"begin":184,"end":195},"obj":"http://purl.obolibrary.org/obo/MAT_0000373"},{"id":"T3","span":{"begin":201,"end":207},"obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"T4","span":{"begin":278,"end":286},"obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"T5","span":{"begin":489,"end":497},"obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"T6","span":{"begin":903,"end":906},"obj":"http://purl.obolibrary.org/obo/MAT_0000140"},{"id":"T7","span":{"begin":1936,"end":1942},"obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"T8","span":{"begin":1944,"end":1952},"obj":"http://purl.obolibrary.org/obo/MAT_0000491"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T2","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T3","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T4","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T5","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T6","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T7","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T8","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"15471865-0#67#72#gene8671","span":{"begin":67,"end":72},"obj":"gene8671"},{"id":"15471865-0#73#79#gene8671","span":{"begin":73,"end":79},"obj":"gene8671"},{"id":"15471865-0#88#113#diseaseC0268435","span":{"begin":88,"end":113},"obj":"diseaseC0268435"},{"id":"15471865-0#118#126#diseaseC0017601","span":{"begin":118,"end":126},"obj":"diseaseC0017601"},{"id":"15471865-0#88#113#diseaseC0268435","span":{"begin":88,"end":113},"obj":"diseaseC0268435"},{"id":"15471865-0#118#126#diseaseC0017601","span":{"begin":118,"end":126},"obj":"diseaseC0017601"},{"id":"15471865-3#30#35#gene8671","span":{"begin":477,"end":482},"obj":"gene8671"},{"id":"15471865-3#96#105#diseaseC0086543","span":{"begin":543,"end":552},"obj":"diseaseC0086543"},{"id":"15471865-3#96#105#diseaseC0521707","span":{"begin":543,"end":552},"obj":"diseaseC0521707"},{"id":"15471865-4#100#105#gene8671","span":{"begin":861,"end":866},"obj":"gene8671"},{"id":"15471865-4#162#180#diseaseC0025362","span":{"begin":923,"end":941},"obj":"diseaseC0025362"},{"id":"15471865-4#162#180#diseaseC3714756","span":{"begin":923,"end":941},"obj":"diseaseC3714756"},{"id":"15471865-5#79#84#gene8671","span":{"begin":1022,"end":1027},"obj":"gene8671"},{"id":"15471865-5#95#100#gene8671","span":{"begin":1038,"end":1043},"obj":"gene8671"},{"id":"15471865-5#37#49#diseaseC1857276","span":{"begin":980,"end":992},"obj":"diseaseC1857276"}],"relations":[{"id":"67#72#gene867188#113#diseaseC0268435","pred":"associated_with","subj":"15471865-0#67#72#gene8671","obj":"15471865-0#88#113#diseaseC0268435"},{"id":"67#72#gene8671118#126#diseaseC0017601","pred":"associated_with","subj":"15471865-0#67#72#gene8671","obj":"15471865-0#118#126#diseaseC0017601"},{"id":"67#72#gene867188#113#diseaseC0268435","pred":"associated_with","subj":"15471865-0#67#72#gene8671","obj":"15471865-0#88#113#diseaseC0268435"},{"id":"67#72#gene8671118#126#diseaseC0017601","pred":"associated_with","subj":"15471865-0#67#72#gene8671","obj":"15471865-0#118#126#diseaseC0017601"},{"id":"73#79#gene867188#113#diseaseC0268435","pred":"associated_with","subj":"15471865-0#73#79#gene8671","obj":"15471865-0#88#113#diseaseC0268435"},{"id":"73#79#gene8671118#126#diseaseC0017601","pred":"associated_with","subj":"15471865-0#73#79#gene8671","obj":"15471865-0#118#126#diseaseC0017601"},{"id":"73#79#gene867188#113#diseaseC0268435","pred":"associated_with","subj":"15471865-0#73#79#gene8671","obj":"15471865-0#88#113#diseaseC0268435"},{"id":"73#79#gene8671118#126#diseaseC0017601","pred":"associated_with","subj":"15471865-0#73#79#gene8671","obj":"15471865-0#118#126#diseaseC0017601"},{"id":"30#35#gene867196#105#diseaseC0086543","pred":"associated_with","subj":"15471865-3#30#35#gene8671","obj":"15471865-3#96#105#diseaseC0086543"},{"id":"30#35#gene867196#105#diseaseC0521707","pred":"associated_with","subj":"15471865-3#30#35#gene8671","obj":"15471865-3#96#105#diseaseC0521707"},{"id":"100#105#gene8671162#180#diseaseC0025362","pred":"associated_with","subj":"15471865-4#100#105#gene8671","obj":"15471865-4#162#180#diseaseC0025362"},{"id":"100#105#gene8671162#180#diseaseC3714756","pred":"associated_with","subj":"15471865-4#100#105#gene8671","obj":"15471865-4#162#180#diseaseC3714756"},{"id":"79#84#gene867137#49#diseaseC1857276","pred":"associated_with","subj":"15471865-5#79#84#gene8671","obj":"15471865-5#37#49#diseaseC1857276"},{"id":"95#100#gene867137#49#diseaseC1857276","pred":"associated_with","subj":"15471865-5#95#100#gene8671","obj":"15471865-5#37#49#diseaseC1857276"}],"attributes":[{"subj":"15471865-0#67#72#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-0#73#79#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-0#88#113#diseaseC0268435","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-0#118#126#diseaseC0017601","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-0#88#113#diseaseC0268435","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-0#118#126#diseaseC0017601","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-3#30#35#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-3#96#105#diseaseC0086543","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-3#96#105#diseaseC0521707","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-4#100#105#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-4#162#180#diseaseC0025362","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-4#162#180#diseaseC3714756","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-5#79#84#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-5#95#100#gene8671","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"15471865-5#37#49#diseaseC1857276","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"PubCasesHPO","denotations":[{"id":"TI1","span":{"begin":105,"end":113},"obj":"HP:0001941"},{"id":"TI2","span":{"begin":118,"end":126},"obj":"HP:0000501"},{"id":"AB1","span":{"begin":489,"end":520},"obj":"HP:0002049"},{"id":"AB2","span":{"begin":529,"end":537},"obj":"HP:0000501"},{"id":"AB3","span":{"begin":543,"end":552},"obj":"HP:0000518"},{"id":"AB4","span":{"begin":2010,"end":2018},"obj":"HP:0000501"}],"attributes":[{"subj":"TI1","pred":"source","obj":"PubCasesHPO"},{"subj":"TI2","pred":"source","obj":"PubCasesHPO"},{"subj":"AB1","pred":"source","obj":"PubCasesHPO"},{"subj":"AB2","pred":"source","obj":"PubCasesHPO"},{"subj":"AB3","pred":"source","obj":"PubCasesHPO"},{"subj":"AB4","pred":"source","obj":"PubCasesHPO"}]},{"project":"PubCasesORDO","denotations":[{"id":"AB1","span":{"begin":489,"end":520},"obj":"ORDO:47159"},{"id":"AB2","span":{"begin":522,"end":526},"obj":"ORDO:47159"},{"id":"AB3","span":{"begin":886,"end":890},"obj":"ORDO:47159"}],"namespaces":[{"prefix":"ORDO","uri":"http://www.orpha.net/ORDO/Orphanet_"}],"attributes":[{"subj":"AB1","pred":"source","obj":"PubCasesORDO"},{"subj":"AB2","pred":"source","obj":"PubCasesORDO"},{"subj":"AB3","pred":"source","obj":"PubCasesORDO"}]},{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":157},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":158,"end":353},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":354,"end":446},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":447,"end":600},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":601,"end":739},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":740,"end":746},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":747,"end":760},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":761,"end":942},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":943,"end":1063},"obj":"Sentence"},{"id":"TextSentencer_T10","span":{"begin":1064,"end":1179},"obj":"Sentence"},{"id":"TextSentencer_T11","span":{"begin":1180,"end":1313},"obj":"Sentence"},{"id":"TextSentencer_T12","span":{"begin":1314,"end":1407},"obj":"Sentence"},{"id":"TextSentencer_T13","span":{"begin":1408,"end":1662},"obj":"Sentence"},{"id":"TextSentencer_T14","span":{"begin":1663,"end":1768},"obj":"Sentence"},{"id":"TextSentencer_T15","span":{"begin":1769,"end":2020},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":157},"obj":"Sentence"},{"id":"T2","span":{"begin":158,"end":353},"obj":"Sentence"},{"id":"T3","span":{"begin":354,"end":446},"obj":"Sentence"},{"id":"T4","span":{"begin":447,"end":600},"obj":"Sentence"},{"id":"T5","span":{"begin":601,"end":739},"obj":"Sentence"},{"id":"T6","span":{"begin":740,"end":746},"obj":"Sentence"},{"id":"T7","span":{"begin":747,"end":760},"obj":"Sentence"},{"id":"T8","span":{"begin":761,"end":942},"obj":"Sentence"},{"id":"T9","span":{"begin":943,"end":1063},"obj":"Sentence"},{"id":"T10","span":{"begin":1064,"end":1179},"obj":"Sentence"},{"id":"T11","span":{"begin":1180,"end":1313},"obj":"Sentence"},{"id":"T12","span":{"begin":1314,"end":1407},"obj":"Sentence"},{"id":"T13","span":{"begin":1408,"end":1662},"obj":"Sentence"},{"id":"T14","span":{"begin":1663,"end":1768},"obj":"Sentence"},{"id":"T15","span":{"begin":1769,"end":2020},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T8","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T9","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T10","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T11","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T12","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T13","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T14","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T15","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"},{"subj":"T13","pred":"source","obj":"sentences"},{"subj":"T14","pred":"source","obj":"sentences"},{"subj":"T15","pred":"source","obj":"sentences"}]},{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":201,"end":207},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":1936,"end":1942},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":903,"end":906},"obj":"http://purl.obolibrary.org/obo/UBERON_0000970"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":184,"end":195},"obj":"http://purl.obolibrary.org/obo/UBERON_3010224"},{"id":"PD-UBERON-AE-B_T5","span":{"begin":278,"end":293},"obj":"http://purl.obolibrary.org/obo/UBERON_0004134"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T5","pred":"source","obj":"performance-test"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":73,"end":79},"obj":"gene:8671"},{"id":"T1","span":{"begin":118,"end":126},"obj":"disease:C0017601"},{"id":"T2","span":{"begin":67,"end":72},"obj":"gene:8671"},{"id":"T3","span":{"begin":118,"end":126},"obj":"disease:C0017601"},{"id":"T4","span":{"begin":477,"end":482},"obj":"gene:8671"},{"id":"T5","span":{"begin":543,"end":552},"obj":"disease:C0521707"},{"id":"T6","span":{"begin":477,"end":482},"obj":"gene:8671"},{"id":"T7","span":{"begin":543,"end":552},"obj":"disease:C0086543"},{"id":"T8","span":{"begin":477,"end":482},"obj":"gene:8671"},{"id":"T9","span":{"begin":522,"end":526},"obj":"disease:C0268435"},{"id":"T10","span":{"begin":477,"end":482},"obj":"gene:8671"},{"id":"T11","span":{"begin":489,"end":520},"obj":"disease:C0268435"},{"id":"T12","span":{"begin":861,"end":866},"obj":"gene:8671"},{"id":"T13","span":{"begin":923,"end":941},"obj":"disease:C0025362"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"},{"id":"R5","pred":"associated_with","subj":"T8","obj":"T9"},{"id":"R6","pred":"associated_with","subj":"T10","obj":"T11"},{"id":"R7","pred":"associated_with","subj":"T12","obj":"T13"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"},{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"},{"subj":"T6","pred":"source","obj":"DisGeNET"},{"subj":"T7","pred":"source","obj":"DisGeNET"},{"subj":"T8","pred":"source","obj":"DisGeNET"},{"subj":"T9","pred":"source","obj":"DisGeNET"},{"subj":"T10","pred":"source","obj":"DisGeNET"},{"subj":"T11","pred":"source","obj":"DisGeNET"},{"subj":"T12","pred":"source","obj":"DisGeNET"},{"subj":"T13","pred":"source","obj":"DisGeNET"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":88,"end":96},"obj":"Body_part"},{"id":"T2","span":{"begin":184,"end":195},"obj":"Body_part"},{"id":"T3","span":{"begin":201,"end":207},"obj":"Body_part"},{"id":"T4","span":{"begin":278,"end":286},"obj":"Body_part"},{"id":"T5","span":{"begin":489,"end":497},"obj":"Body_part"},{"id":"T6","span":{"begin":903,"end":906},"obj":"Body_part"},{"id":"T7","span":{"begin":1936,"end":1942},"obj":"Body_part"},{"id":"T8","span":{"begin":1944,"end":1952},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000373"},{"id":"A3","pred":"mat_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"A4","pred":"mat_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"A5","pred":"mat_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"id":"A6","pred":"mat_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MAT_0000140"},{"id":"A7","pred":"mat_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MAT_0000119"},{"id":"A8","pred":"mat_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MAT_0000491"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"},{"subj":"T2","pred":"source","obj":"Anatomy-MAT"},{"subj":"T3","pred":"source","obj":"Anatomy-MAT"},{"subj":"T4","pred":"source","obj":"Anatomy-MAT"},{"subj":"T5","pred":"source","obj":"Anatomy-MAT"},{"subj":"T6","pred":"source","obj":"Anatomy-MAT"},{"subj":"T7","pred":"source","obj":"Anatomy-MAT"},{"subj":"T8","pred":"source","obj":"Anatomy-MAT"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":105,"end":113},"obj":"Disease"},{"id":"T2","span":{"begin":118,"end":126},"obj":"Disease"},{"id":"T3","span":{"begin":489,"end":520},"obj":"Disease"},{"id":"T4","span":{"begin":522,"end":526},"obj":"Disease"},{"id":"T5","span":{"begin":529,"end":537},"obj":"Disease"},{"id":"T6","span":{"begin":543,"end":552},"obj":"Disease"},{"id":"T7","span":{"begin":886,"end":890},"obj":"Disease"},{"id":"T8","span":{"begin":923,"end":941},"obj":"Disease"},{"id":"T9","span":{"begin":2010,"end":2018},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0006022"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005041"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0008369"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0008369"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005041"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005129"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0008369"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0001071"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0005041"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"},{"subj":"T3","pred":"source","obj":"mondo_disease"},{"subj":"T4","pred":"source","obj":"mondo_disease"},{"subj":"T5","pred":"source","obj":"mondo_disease"},{"subj":"T6","pred":"source","obj":"mondo_disease"},{"subj":"T7","pred":"source","obj":"mondo_disease"},{"subj":"T8","pred":"source","obj":"mondo_disease"},{"subj":"T9","pred":"source","obj":"mondo_disease"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":118,"end":126},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":364,"end":369},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":529,"end":537},"obj":"OrganismTaxon"},{"id":"T4","span":{"begin":1047,"end":1054},"obj":"OrganismTaxon"},{"id":"T6","span":{"begin":2010,"end":2018},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"5882"},{"id":"A2","pred":"db_id","subj":"T2","obj":"9606"},{"id":"A3","pred":"db_id","subj":"T3","obj":"5882"},{"id":"A4","pred":"db_id","subj":"T4","obj":"262014"},{"id":"A5","pred":"db_id","subj":"T4","obj":"8353"},{"id":"A6","pred":"db_id","subj":"T6","obj":"5882"},{"subj":"T1","pred":"source","obj":"NCBITAXON"},{"subj":"T2","pred":"source","obj":"NCBITAXON"},{"subj":"T3","pred":"source","obj":"NCBITAXON"},{"subj":"T4","pred":"source","obj":"NCBITAXON"},{"subj":"T6","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":201,"end":207},"obj":"Body_part"},{"id":"T2","span":{"begin":278,"end":293},"obj":"Body_part"},{"id":"T3","span":{"begin":903,"end":906},"obj":"Body_part"},{"id":"T6","span":{"begin":1100,"end":1113},"obj":"Body_part"},{"id":"T7","span":{"begin":1139,"end":1147},"obj":"Body_part"},{"id":"T10","span":{"begin":1936,"end":1942},"obj":"Body_part"},{"id":"T11","span":{"begin":1976,"end":1992},"obj":"Body_part"},{"id":"T12","span":{"begin":1993,"end":1998},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0004134"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000019"},{"id":"A4","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000970"},{"id":"A5","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0010230"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/GO_0005622"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/GO_0016020"},{"id":"A8","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0000094"},{"id":"A9","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0001766"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0006314"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T6","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T7","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T10","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T11","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T12","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":88,"end":113},"obj":"Phenotype"},{"id":"T2","span":{"begin":118,"end":126},"obj":"Phenotype"},{"id":"T3","span":{"begin":489,"end":520},"obj":"Phenotype"},{"id":"T4","span":{"begin":522,"end":526},"obj":"Phenotype"},{"id":"T5","span":{"begin":529,"end":537},"obj":"Phenotype"},{"id":"T6","span":{"begin":543,"end":552},"obj":"Phenotype"},{"id":"T7","span":{"begin":886,"end":890},"obj":"Phenotype"},{"id":"T8","span":{"begin":923,"end":941},"obj":"Phenotype"},{"id":"T9","span":{"begin":2010,"end":2018},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0002049"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0000501"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0002049"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0002049"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"HP:0000501"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"HP:0000518"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"HP:0002049"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"HP:0001249"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"HP:0000501"},{"subj":"T1","pred":"source","obj":"HP-phenotype"},{"subj":"T2","pred":"source","obj":"HP-phenotype"},{"subj":"T3","pred":"source","obj":"HP-phenotype"},{"subj":"T4","pred":"source","obj":"HP-phenotype"},{"subj":"T5","pred":"source","obj":"HP-phenotype"},{"subj":"T6","pred":"source","obj":"HP-phenotype"},{"subj":"T7","pred":"source","obj":"HP-phenotype"},{"subj":"T8","pred":"source","obj":"HP-phenotype"},{"subj":"T9","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":1055,"end":1062},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0000023"},{"subj":"T1","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Glycosmos6-MAT","color":"#93ddec","default":true},{"id":"DisGeNET5_gene_disease","color":"#ece193"},{"id":"PubCasesHPO","color":"#c793ec"},{"id":"PubCasesORDO","color":"#93ecad"},{"id":"sentences","color":"#ec9393"},{"id":"performance-test","color":"#93acec"},{"id":"DisGeNET","color":"#c6ec93"},{"id":"Anatomy-MAT","color":"#ec93e0"},{"id":"mondo_disease","color":"#93ecdd"},{"id":"NCBITAXON","color":"#ecc393"},{"id":"Anatomy-UBERON","color":"#a993ec"},{"id":"HP-phenotype","color":"#96ec93"},{"id":"CL-cell","color":"#ec93b0"}]}]}}