> top > docs > PubMed:1541828 > annotations

PubMed:1541828 JSONTXT

Annnotations TAB JSON ListView MergeView

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 60-79 protein denotes human cytokine IL-4
T2 81-85 protein denotes IL-4
T3 98-115 cell_type denotes activated T cells
T4 121-141 protein denotes pleiotropic cytokine
T5 209-216 cell_type denotes T cells
T6 218-225 cell_type denotes B cells
T7 231-241 cell_type denotes mast cells
T8 263-291 DNA denotes upstream regulatory elements
T9 299-318 DNA denotes human IL-4 promoter
T10 322-371 DNA denotes novel T cell-specific negative regulatory element
T11 373-376 DNA denotes NRE
T12 461-470 DNA denotes IL-4 gene
T13 491-496 DNA denotes NRE-I
T14 526-532 DNA denotes NRE-II
T15 537-560 protein denotes T cell-specific protein
T16 561-566 protein denotes Neg-1
T17 573-591 protein denotes ubiquitous protein
T18 592-597 protein denotes Neg-2
T19 609-614 DNA denotes NRE-I
T20 619-625 DNA denotes NRE-II
T21 673-700 DNA denotes positive regulatory element
T22 711-727 DNA denotes 45 bp downstream
T23 735-738 DNA denotes NRE
T24 769-772 DNA denotes PRE
T25 808-811 DNA denotes NRE
T26 849-862 DNA denotes IL-4 promoter
T27 905-908 DNA denotes NRE
T28 931-967 DNA denotes enhancer positive regulatory element
T29 1031-1035 protein denotes IL-4
T30 1050-1057 cell_type denotes T cells

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 56-79 NP denotes the human cytokine IL-4
C2 81-85 NP denotes IL-4
C3 98-115 NP denotes activated T cells
C4 209-216 NP denotes T cells
C5 320-377 NP denotes A novel T cell-specific negative regulatory element (NRE)
C6 457-470 NP denotes the IL-4 gene
C7 490-497 NP denotes (NRE-I)
C8 525-533 NP denotes (NRE-II)
C9 609-614 NP denotes NRE-I
C10 619-625 NP denotes NRE-II
C11 671-700 NP denotes a positive regulatory element
C12 731-738 NP denotes the NRE
C13 765-772 NP denotes the PRE
C14 804-811 NP denotes the NRE
C15 902-908 NP denotes an NRE
C16 927-967 NP denotes the enhancer positive regulatory element
C17 1050-1057 NP denotes T cells
R1 C2 C1 coref-ident IL-4,the human cytokine IL-4
R2 C4 C3 coref-other T cells,activated T cells
R3 C6 C2 coref-ident the IL-4 gene,IL-4
R4 C9 C7 coref-ident NRE-I,(NRE-I)
R5 C10 C8 coref-ident NRE-II,(NRE-II)
R6 C12 C5 coref-ident the NRE,A novel T cell-specific negative regulatory element (NRE)
R7 C13 C11 coref-ident the PRE,a positive regulatory element
R8 C14 C12 coref-ident the NRE,the NRE
R9 C15 C14 coref-ident an NRE,the NRE
R10 C16 C13 coref-ident the enhancer positive regulatory element,the PRE
R11 C17 C4 coref-ident T cells,T cells

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-80 Sentence denotes T cell-specific negative regulation of transcription of the human cytokine IL-4.
S2 81-242 Sentence denotes IL-4 secreted by activated T cells is a pleiotropic cytokine affecting growth and differentiation of diverse cell types such as T cells, B cells, and mast cells.
S3 243-319 Sentence denotes We investigated the upstream regulatory elements of the human IL-4 promoter.
S4 320-534 Sentence denotes A novel T cell-specific negative regulatory element (NRE) composed of two protein-binding sites were mapped in the 5' flanking region of the IL-4 gene: -311CTCCCTTCT-303 (NRE-I) and -288CTTTTTGCTT-TGC-300 (NRE-II).
S5 535-657 Sentence denotes A T cell-specific protein Neg-1 and a ubiquitous protein Neg-2 binding to NRE-I and NRE-II, respectively, were identified.
S6 658-739 Sentence denotes Furthermore, a positive regulatory element was found 45 bp downstream of the NRE.
S7 740-824 Sentence denotes The enhancer activity of the PRE was completely suppressed when the NRE was present.
S8 825-968 Sentence denotes These data suggest that IL-4 promoter activity is normally down-regulated by an NRE via repression of the enhancer positive regulatory element.
S9 969-1058 Sentence denotes These data may have implications for the stringent control of IL-4 expression in T cells.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-35 other_name denotes T cell-specific negative regulation
T2 60-79 protein_molecule denotes human cytokine IL-4
T3 81-85 protein_molecule denotes IL-4
T4 98-115 cell_type denotes activated T cells
T5 121-141 protein_family_or_group denotes pleiotropic cytokine
T6 209-216 cell_type denotes T cells
T7 218-225 cell_type denotes B cells
T8 231-241 cell_type denotes mast cells
T9 263-291 DNA_domain_or_region denotes upstream regulatory elements
T10 299-318 DNA_domain_or_region denotes human IL-4 promoter
T11 322-371 DNA_domain_or_region denotes novel T cell-specific negative regulatory element
T12 373-376 DNA_domain_or_region denotes NRE
T13 461-470 DNA_domain_or_region denotes IL-4 gene
T14 472-489 polynucleotide denotes -311CTCCCTTCT-303
T15 491-496 DNA_domain_or_region denotes NRE-I
T16 502-524 polynucleotide denotes -288CTTTTTGCTT-TGC-300
T17 526-532 DNA_domain_or_region denotes NRE-II
T18 537-560 protein_family_or_group denotes T cell-specific protein
T19 561-566 protein_molecule denotes Neg-1
T20 573-591 protein_family_or_group denotes ubiquitous protein
T21 592-597 protein_molecule denotes Neg-2
T22 609-614 DNA_domain_or_region denotes NRE-I
T23 619-625 DNA_domain_or_region denotes NRE-II
T24 673-700 DNA_domain_or_region denotes positive regulatory element
T25 711-727 DNA_domain_or_region denotes 45 bp downstream
T26 735-738 DNA_domain_or_region denotes NRE
T27 769-772 DNA_domain_or_region denotes PRE
T28 808-811 DNA_domain_or_region denotes NRE
T29 849-862 DNA_domain_or_region denotes IL-4 promoter
T30 905-908 DNA_domain_or_region denotes NRE
T31 931-967 DNA_domain_or_region denotes enhancer positive regulatory element
T32 1031-1035 protein_molecule denotes IL-4
T33 1050-1057 cell_type denotes T cells