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PubMed:1533441 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-14 protein denotes Nuclear factor
T2 18-35 cell_type denotes activated T cells
T3 45-48 protein denotes Fos
T4 53-56 protein denotes Jun
T5 62-82 protein denotes nuclear factor NF-AT
T6 106-113 cell_type denotes T cells
T7 137-164 protein denotes T-cell receptor/CD3 complex
T8 186-211 DNA denotes interleukin-2 (IL-2) gene
T9 232-237 protein denotes NF-AT
T10 382-387 protein denotes NF-AT
T11 540-557 protein denotes nuclear component
T12 601-618 protein denotes nuclear component
T13 622-627 protein denotes NF-AT
T14 635-655 protein denotes transcription factor
T15 656-660 protein denotes AP-1
T16 705-710 protein denotes NF-AT
T17 720-723 protein denotes Fos
T18 728-731 protein denotes Jun
T19 769-802 protein denotes pre-existing NF-AT-binding factor
T20 844-864 cell_type denotes unstimulated T cells
T21 968-973 protein denotes NF-AT
T22 1091-1104 protein denotes NF-AT complex
T23 1178-1181 protein denotes Fos
T24 1185-1201 protein denotes Fos/Jun proteins
T25 1209-1229 protein denotes pre-existing complex

genia-medco-coref

Id Subject Object Predicate Lexical cue
C2 18-35 NP denotes activated T cells
C1 0-35 NP denotes Nuclear factor of activated T cells
C3 45-56 NP denotes Fos and Jun
C4 58-82 NP denotes The nuclear factor NF-AT
C5 106-164 NP denotes T cells stimulated through the T-cell receptor/CD3 complex
C6 232-237 NP denotes NF-AT
C7 294-296 NP denotes it
C8 340-359 NP denotes cyclosporin A (CsA)
C9 382-387 NP denotes NF-AT
C10 447-450 NP denotes CsA
C11 511-514 NP denotes CsA
C12 538-557 NP denotes a nuclear component
C14 622-627 NP denotes NF-AT
C13 579-627 NP denotes the newly synthesized nuclear component of NF-AT
C15 631-660 NP denotes the transcription factor AP-1
C16 705-710 NP denotes NF-AT
C17 720-740 NP denotes Fos and Jun proteins
C18 767-802 NP denotes a pre-existing NF-AT-binding factor
C19 803-807 NP denotes that
C20 968-973 NP denotes NF-AT
C21 1007-1010 NP denotes CsA
C22 1074-1104 NP denotes the pre-existing NF-AT complex
C23 1112-1115 NP denotes CsA
C24 1205-1229 NP denotes the pre-existing complex
R1 C4 C1 coref-other The nuclear factor NF-AT,Nuclear factor of activated T cells
R2 C5 C2 coref-other T cells stimulated through the T-cell receptor/CD3 complex,activated T cells
R3 C6 C4 coref-ident NF-AT,The nuclear factor NF-AT
R4 C7 C6 coref-pron it,NF-AT
R5 C9 C6 coref-ident NF-AT,NF-AT
R6 C10 C8 coref-ident CsA,cyclosporin A (CsA)
R7 C11 C10 coref-ident CsA,CsA
R8 C14 C9 coref-ident NF-AT,NF-AT
R9 C13 C12 coref-other the newly synthesized nuclear component of NF-AT,a nuclear component
R10 C15 C13 coref-ident the transcription factor AP-1,the newly synthesized nuclear component of NF-AT
R11 C16 C14 coref-ident NF-AT,NF-AT
R12 C17 C3 coref-ident Fos and Jun proteins,Fos and Jun
R13 C19 C18 coref-relat that,a pre-existing NF-AT-binding factor
R14 C20 C16 coref-ident NF-AT,NF-AT
R15 C21 C11 coref-ident CsA,CsA
R16 C23 C21 coref-ident CsA,CsA
R17 C24 C22 coref-ident the pre-existing complex,the pre-existing NF-AT complex

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-57 Sentence denotes Nuclear factor of activated T cells contains Fos and Jun.
S2 58-222 Sentence denotes The nuclear factor NF-AT (ref. 1) is induced in T cells stimulated through the T-cell receptor/CD3 complex, and is required for interleukin-2 (IL-2) gene induction.
S3 223-381 Sentence denotes Although NF-AT has not been cloned or purified, there is evidence that it is a major target for immunosuppression by cyclosporin A (CsA) and FK506 (refs 2-7).
S4 382-558 Sentence denotes NF-AT induction may require two activation-dependent events: the CsA-sensitive translocation of a pre-existing component and the CsA-resistant synthesis of a nuclear component.
S5 559-661 Sentence denotes Here we report that the newly synthesized nuclear component of NF-AT is the transcription factor AP-1.
S6 662-741 Sentence denotes We show that the inducible nuclear form of NF-AT contains Fos and Jun proteins.
S7 742-865 Sentence denotes Furthermore, we identify a pre-existing NF-AT-binding factor that is present in hypotonic extracts of unstimulated T cells.
S8 866-1230 Sentence denotes On the basis of binding, reconstitution and cotransfection experiments, we propose that activation of NF-AT occurs in at least two stages: a CsA-sensitive stage involving modification and/or translocation of the pre-existing NF-AT complex, and a CsA-insensitive stage involving the addition of newly synthesized Fos or Fos/Jun proteins to the pre-existing complex.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-14 protein_family_or_group denotes Nuclear factor
T2 18-35 cell_type denotes activated T cells
T3 45-48 protein_molecule denotes Fos
T4 53-56 protein_family_or_group denotes Jun
T5 62-82 protein_molecule denotes nuclear factor NF-AT
T6 106-113 cell_type denotes T cells
T7 137-164 protein_complex denotes T-cell receptor/CD3 complex
T8 186-199 protein_molecule denotes interleukin-2
T9 201-205 protein_molecule denotes IL-2
T10 232-237 protein_molecule denotes NF-AT
T11 340-353 other_organic_compound denotes cyclosporin A
T12 355-358 other_organic_compound denotes CsA
T13 364-369 other_organic_compound denotes FK506
T14 382-387 protein_molecule denotes NF-AT
T15 447-450 other_organic_compound denotes CsA
T16 511-514 other_organic_compound denotes CsA
T17 540-557 protein_family_or_group denotes nuclear component
T18 601-618 protein_molecule denotes nuclear component
T19 622-627 protein_molecule denotes NF-AT
T20 635-655 protein_family_or_group denotes transcription factor
T21 656-660 protein_molecule denotes AP-1
T22 705-710 protein_molecule denotes NF-AT
T23 720-723 protein_molecule denotes Fos
T24 728-731 protein_family_or_group denotes Jun
T25 769-781 protein_molecule denotes pre-existing
T26 782-787 protein_molecule denotes NF-AT
T27 844-856 cell_type denotes unstimulated
T28 857-864 cell_type denotes T cells
T29 968-973 protein_molecule denotes NF-AT
T30 1007-1010 other_organic_compound denotes CsA
T31 1091-1096 protein_molecule denotes NF-AT
T32 1112-1115 other_organic_compound denotes CsA
T33 1178-1181 protein_molecule denotes Fos
T34 1185-1201 protein_molecule denotes Fos/Jun proteins
T35 1209-1229 protein_complex denotes pre-existing complex