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PubMed:14514715 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 156-162 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 180-199 https://glytoucan.org/Structures/Glycans/G64581RP denotes N-acetylglucosamine

GGDB-2020

Id Subject Object Predicate Lexical cue
T1 124-128 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T2 421-425 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T3 581-585 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T4 878-882 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T5 1136-1140 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8

ggdb-test

Id Subject Object Predicate Lexical cue
T1 124-128 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T2 421-425 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T3 581-585 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T4 878-882 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
T5 1136-1140 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 156-162 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO
T2 180-199 Glycan_Motif denotes N-acetylglucosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G64581RP

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 156-162 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 180-199 https://glytoucan.org/Structures/Glycans/G64581RP denotes N-acetylglucosamine

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 324-330 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T2 373-378 http://purl.obolibrary.org/obo/MAT_0000399 denotes fetus
T3 399-405 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 13-19 FMAID:256050 denotes tissue
_T2 129-133 FMAID:198663 denotes gene
_T3 156-162 FMAID:196784 denotes fucose
_T4 156-162 FMAID:82790 denotes fucose
_T5 180-199 FMAID:196781 denotes N-acetylglucosamine
_T6 180-199 FMAID:82787 denotes N-acetylglucosamine
_T7 271-275 FMAID:214734 denotes main
_T8 324-330 FMAID:69068 denotes embryo
_T9 324-330 FMAID:169646 denotes embryo
_T10 373-378 FMAID:162386 denotes fetus
_T11 373-378 FMAID:63919 denotes fetus
_T12 399-405 FMAID:69068 denotes embryo
_T13 399-405 FMAID:169646 denotes embryo
_T14 446-451 FMAID:198073 denotes exons
_T15 446-451 FMAID:84120 denotes exons
_T16 486-491 FMAID:198073 denotes exons
_T17 486-491 FMAID:84120 denotes exons
_T18 525-527 FMAID:63516 denotes L1
_T19 525-527 FMAID:167744 denotes L1
_T20 532-534 FMAID:167745 denotes L2
_T21 532-534 FMAID:63517 denotes L2
_T22 553-560 FMAID:198062 denotes genomic
_T23 553-560 FMAID:84116 denotes genomic
_T24 561-573 FMAID:67498 denotes organization
_T25 561-573 FMAID:166081 denotes organization
_T26 586-590 FMAID:198663 denotes gene
_T27 650-654 FMAID:84120 denotes exon
_T28 650-654 FMAID:198073 denotes exon
_T29 684-689 FMAID:198073 denotes exons
_T30 684-689 FMAID:84120 denotes exons
_T31 699-703 FMAID:198073 denotes Exon
_T32 699-703 FMAID:84120 denotes Exon
_T33 760-764 FMAID:84120 denotes exon
_T34 760-764 FMAID:198073 denotes exon
_T35 788-792 FMAID:198073 denotes exon
_T36 788-792 FMAID:84120 denotes exon
_T37 836-840 FMAID:198073 denotes exon
_T38 836-840 FMAID:84120 denotes exon
_T39 949-954 FMAID:198073 denotes exons
_T40 949-954 FMAID:84120 denotes exons
_T41 1097-1102 FMAID:84120 denotes exons
_T42 1097-1102 FMAID:198073 denotes exons
_T43 1300-1304 FMAID:198073 denotes exon
_T44 1300-1304 FMAID:84120 denotes exon

uniprot-human

Id Subject Object Predicate Lexical cue
T1 124-128 http://www.uniprot.org/uniprot/Q9BYC5 denotes FUT8
T2 421-425 http://www.uniprot.org/uniprot/Q9BYC5 denotes FUT8
T3 581-585 http://www.uniprot.org/uniprot/Q9BYC5 denotes FUT8
T4 878-882 http://www.uniprot.org/uniprot/Q9BYC5 denotes FUT8
T5 1136-1140 http://www.uniprot.org/uniprot/Q9BYC5 denotes FUT8
T6 525-527 http://www.uniprot.org/uniprot/Q9NUQ9 denotes L1
T7 532-534 http://www.uniprot.org/uniprot/Q401N2 denotes L2

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 525-527 http://www.uniprot.org/uniprot/P11369 denotes L1

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 0-8 http://purl.bioontology.org/ontology/NCBITAXON/190658 denotes Activity
T2 0-8 http://purl.bioontology.org/ontology/STY/T052 denotes Activity
T3 13-19 http://purl.bioontology.org/ontology/STY/T024 denotes tissue

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-104 Sentence denotes Activity and tissue distribution of splice variants of alpha6-fucosyltransferase in human embryogenesis.
TextSentencer_T2 105-236 Sentence denotes The product of the FUT8 gene transfers an alpha1-6 fucose on the innermost N-acetylglucosamine of the chitobiose core of N-glycans.
TextSentencer_T3 237-331 Sentence denotes Northern blot analysis shows four main transcripts of 3.0, 3.3, 3.9, and 4.2 kb in the embryo.
TextSentencer_T4 332-389 Sentence denotes The larger forms around 4-kb decrease in fetus and adult.
TextSentencer_T5 390-438 Sentence denotes Fourteen embryo transcripts of FUT8 were cloned.
TextSentencer_T6 439-614 Sentence denotes Twelve exons comprising two new 5'untranslated-exons (A and B) and two new 3'UT-ends (L1 and L2) and the complete genomic organization of the FUT8 gene (330 kb) are described.
TextSentencer_T7 615-698 Sentence denotes Transcripts starting with the 5'UT-exon A are always associated with exons C and D.
TextSentencer_T8 699-795 Sentence denotes Exon B initiates another series of transcripts associated to exon C and D or directly to exon D.
TextSentencer_T9 796-843 Sentence denotes A third series of transcripts starts at exon C.
TextSentencer_T10 844-966 Sentence denotes The data suggest an expression of FUT8 regulated by three different promoters, starting transcription in exons A, B, or C.
TextSentencer_T11 967-1024 Sentence denotes The A or C series are better expressed than the B series.
TextSentencer_T12 1025-1349 Sentence denotes After transfection with these cDNA constructs the transcripts with 5'UT-exons A or C have higher expression of FUT8 transcripts and higher alpha6-fucosyltransferase activity, whereas the activity of the B series is about two-thirds lower for both parameters, suggesting that exon B reduces the expression of the transcripts.
T1 0-104 Sentence denotes Activity and tissue distribution of splice variants of alpha6-fucosyltransferase in human embryogenesis.
T2 105-236 Sentence denotes The product of the FUT8 gene transfers an alpha1-6 fucose on the innermost N-acetylglucosamine of the chitobiose core of N-glycans.
T3 237-331 Sentence denotes Northern blot analysis shows four main transcripts of 3.0, 3.3, 3.9, and 4.2 kb in the embryo.
T4 332-389 Sentence denotes The larger forms around 4-kb decrease in fetus and adult.
T5 390-438 Sentence denotes Fourteen embryo transcripts of FUT8 were cloned.
T6 439-614 Sentence denotes Twelve exons comprising two new 5'untranslated-exons (A and B) and two new 3'UT-ends (L1 and L2) and the complete genomic organization of the FUT8 gene (330 kb) are described.
T7 615-1024 Sentence denotes Transcripts starting with the 5'UT-exon A are always associated with exons C and D. Exon B initiates another series of transcripts associated to exon C and D or directly to exon D. A third series of transcripts starts at exon C. The data suggest an expression of FUT8 regulated by three different promoters, starting transcription in exons A, B, or C. The A or C series are better expressed than the B series.
T8 1025-1349 Sentence denotes After transfection with these cDNA constructs the transcripts with 5'UT-exons A or C have higher expression of FUT8 transcripts and higher alpha6-fucosyltransferase activity, whereas the activity of the B series is about two-thirds lower for both parameters, suggesting that exon B reduces the expression of the transcripts.
T1 0-104 Sentence denotes Activity and tissue distribution of splice variants of alpha6-fucosyltransferase in human embryogenesis.
T2 105-236 Sentence denotes The product of the FUT8 gene transfers an alpha1-6 fucose on the innermost N-acetylglucosamine of the chitobiose core of N-glycans.
T3 237-331 Sentence denotes Northern blot analysis shows four main transcripts of 3.0, 3.3, 3.9, and 4.2 kb in the embryo.
T4 332-389 Sentence denotes The larger forms around 4-kb decrease in fetus and adult.
T5 390-438 Sentence denotes Fourteen embryo transcripts of FUT8 were cloned.
T6 439-614 Sentence denotes Twelve exons comprising two new 5'untranslated-exons (A and B) and two new 3'UT-ends (L1 and L2) and the complete genomic organization of the FUT8 gene (330 kb) are described.
T7 615-698 Sentence denotes Transcripts starting with the 5'UT-exon A are always associated with exons C and D.
T8 699-795 Sentence denotes Exon B initiates another series of transcripts associated to exon C and D or directly to exon D.
T9 796-843 Sentence denotes A third series of transcripts starts at exon C.
T10 844-966 Sentence denotes The data suggest an expression of FUT8 regulated by three different promoters, starting transcription in exons A, B, or C.
T11 967-1024 Sentence denotes The A or C series are better expressed than the B series.
T12 1025-1349 Sentence denotes After transfection with these cDNA constructs the transcripts with 5'UT-exons A or C have higher expression of FUT8 transcripts and higher alpha6-fucosyltransferase activity, whereas the activity of the B series is about two-thirds lower for both parameters, suggesting that exon B reduces the expression of the transcripts.

GO-BP

Id Subject Object Predicate Lexical cue
T1 36-42 http://purl.obolibrary.org/obo/GO_0045292 denotes splice
T2 90-103 http://purl.obolibrary.org/obo/GO_0009790 denotes embryogenesis
T3 90-103 http://purl.obolibrary.org/obo/GO_0009792 denotes embryogenesis
T4 90-103 http://purl.obolibrary.org/obo/GO_0009793 denotes embryogenesis
T5 276-287 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T6 406-417 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T7 734-745 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T8 814-825 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T9 1075-1086 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T10 1141-1152 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts
T11 615-626 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcripts
T12 932-945 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T13 883-892 http://purl.obolibrary.org/obo/GO_0065007 denotes regulated
T14 1171-1198 http://purl.obolibrary.org/obo/GO_0008417 denotes fucosyltransferase activity
T15 1212-1229 http://purl.obolibrary.org/obo/GO_0004066 denotes activity of the B

GO-CC

Id Subject Object Predicate Lexical cue
T1 218-222 http://purl.obolibrary.org/obo/GO_0019013 denotes core

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 13-19 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T2 324-330 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryo
T3 399-405 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryo

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 84-89 http://edamontology.org/topic_2815 denotes human
T2 276-287 http://edamontology.org/topic_0203 denotes transcripts
T3 276-287 http://edamontology.org/topic_3308 denotes transcripts
T4 276-287 http://edamontology.org/topic_0110 denotes transcripts
T5 276-287 http://edamontology.org/topic_3512 denotes transcripts
T6 406-417 http://edamontology.org/topic_3512 denotes transcripts
T7 406-417 http://edamontology.org/topic_3308 denotes transcripts
T8 406-417 http://edamontology.org/topic_0203 denotes transcripts
T9 406-417 http://edamontology.org/topic_0110 denotes transcripts
T10 446-451 http://edamontology.org/topic_2397 denotes exons
T11 446-451 http://edamontology.org/topic_3512 denotes exons
T12 486-491 http://edamontology.org/topic_2397 denotes exons
T13 486-491 http://edamontology.org/topic_3512 denotes exons
T14 553-560 http://edamontology.org/topic_0622 denotes genomic
T15 615-626 http://edamontology.org/topic_3512 denotes Transcripts
T16 615-626 http://edamontology.org/topic_3308 denotes Transcripts
T17 615-626 http://edamontology.org/topic_0110 denotes Transcripts
T18 615-626 http://edamontology.org/topic_0203 denotes Transcripts
T19 650-654 http://edamontology.org/topic_2397 denotes exon
T20 650-654 http://edamontology.org/topic_3512 denotes exon
T21 684-689 http://edamontology.org/topic_3512 denotes exons
T22 684-689 http://edamontology.org/topic_2397 denotes exons
T23 699-703 http://edamontology.org/topic_2397 denotes Exon
T24 699-703 http://edamontology.org/topic_3512 denotes Exon
T25 734-745 http://edamontology.org/topic_0203 denotes transcripts
T26 734-745 http://edamontology.org/topic_0110 denotes transcripts
T27 734-745 http://edamontology.org/topic_3512 denotes transcripts
T28 734-745 http://edamontology.org/topic_3308 denotes transcripts
T29 760-764 http://edamontology.org/topic_2397 denotes exon
T30 760-764 http://edamontology.org/topic_3512 denotes exon
T31 788-792 http://edamontology.org/topic_3512 denotes exon
T32 788-792 http://edamontology.org/topic_2397 denotes exon
T33 814-825 http://edamontology.org/topic_3308 denotes transcripts
T34 814-825 http://edamontology.org/topic_0110 denotes transcripts
T35 814-825 http://edamontology.org/topic_0203 denotes transcripts
T36 814-825 http://edamontology.org/topic_3512 denotes transcripts
T37 836-840 http://edamontology.org/topic_3512 denotes exon
T38 836-840 http://edamontology.org/topic_2397 denotes exon
T39 912-921 http://edamontology.org/topic_0749 denotes promoters
T40 912-921 http://edamontology.org/topic_0111 denotes promoters
T41 912-921 http://edamontology.org/topic_1312 denotes promoters
T42 932-945 http://edamontology.org/topic_0110 denotes transcription
T43 932-945 http://edamontology.org/topic_3512 denotes transcription
T44 932-945 http://edamontology.org/topic_0203 denotes transcription
T45 932-945 http://edamontology.org/topic_3308 denotes transcription
T46 949-954 http://edamontology.org/topic_2397 denotes exons
T47 949-954 http://edamontology.org/topic_3512 denotes exons
T48 1055-1059 http://edamontology.org/topic_3512 denotes cDNA
T49 1075-1086 http://edamontology.org/topic_3308 denotes transcripts
T50 1075-1086 http://edamontology.org/topic_0203 denotes transcripts
T51 1075-1086 http://edamontology.org/topic_3512 denotes transcripts
T52 1075-1086 http://edamontology.org/topic_0110 denotes transcripts
T53 1097-1102 http://edamontology.org/topic_2397 denotes exons
T54 1097-1102 http://edamontology.org/topic_3512 denotes exons
T55 1141-1152 http://edamontology.org/topic_3308 denotes transcripts
T56 1141-1152 http://edamontology.org/topic_3512 denotes transcripts
T57 1141-1152 http://edamontology.org/topic_0203 denotes transcripts
T58 1141-1152 http://edamontology.org/topic_0110 denotes transcripts
T59 1300-1304 http://edamontology.org/topic_2397 denotes exon
T60 1300-1304 http://edamontology.org/topic_3512 denotes exon
T61 1337-1348 http://edamontology.org/topic_0203 denotes transcripts
T62 1337-1348 http://edamontology.org/topic_0110 denotes transcripts
T63 1337-1348 http://edamontology.org/topic_3512 denotes transcripts
T64 1337-1348 http://edamontology.org/topic_3308 denotes transcripts

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 237-250 http://edamontology.org/data_2866 denotes Northern blot
T2 251-259 http://edamontology.org/operation_2945 denotes analysis
T3 604-626 http://edamontology.org/operation_0372 denotes described. Transcripts
T4 848-852 http://edamontology.org/data_0006 denotes data
T5 932-948 http://edamontology.org/data_2769 denotes transcription in
T6 1060-1070 http://edamontology.org/operation_3429 denotes constructs
T7 1141-1156 http://edamontology.org/data_2769 denotes transcripts and
T8 1272-1282 http://edamontology.org/data_2527 denotes parameters

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 124-128 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
PD-GlycoGenes20190927-B_T2 421-425 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
PD-GlycoGenes20190927-B_T3 581-585 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
PD-GlycoGenes20190927-B_T4 878-882 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8
PD-GlycoGenes20190927-B_T5 1136-1140 https://acgg.asia/db/ggdb/info/gg009 denotes FUT8

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 324-330 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T2 373-378 http://purl.obolibrary.org/obo/MAT_0000399 denotes fetus
T3 399-405 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 226-235 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 310-313 http://www.glycoepitope.jp/epitopes/AN0415 denotes 4.2

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 561-573 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organization
PD-UBERON-AE-B_T2 13-19 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 324-330 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryo
PD-UBERON-AE-B_T4 399-405 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryo

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 324-330 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T2 373-378 Body_part denotes fetus http://purl.obolibrary.org/obo/MAT_0000399
T3 399-405 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 84-89 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 13-19 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T2 324-330 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T3 373-378 Body_part denotes fetus http://purl.obolibrary.org/obo/UBERON_0000323
T4 399-405 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922