PubMed:12080076
Annnotations
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 175-217 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T2 | 229-261 | https://acgg.asia/db/ggdb/info/gg038 | denotes | chondroitin-4-sulfotransferase-3 |
| T3 | 263-269 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T4 | 263-267 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T5 | 332-354 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 sulfotransferase |
| T6 | 356-364 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| T7 | 597-603 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T8 | 597-601 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T9 | 704-710 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| T10 | 806-812 | https://acgg.asia/db/ggdb/info/gg037 | denotes | C4ST-2 |
| T11 | 806-810 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T12 | 860-868 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| T13 | 876-918 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T14 | 932-976 | https://acgg.asia/db/ggdb/info/gg046 | denotes | N-acetylgalactosamine-4-O-sulfotransferase 2 |
| T15 | 932-974 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T16 | 984-990 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T17 | 984-988 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T18 | 1156-1162 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T19 | 1156-1160 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T20 | 1290-1296 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T21 | 1290-1294 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T22 | 1409-1415 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T23 | 1409-1413 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T24 | 1420-1426 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| T25 | 1508-1514 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T26 | 1508-1512 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T27 | 1558-1564 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 175-217 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T2 | 229-261 | https://acgg.asia/db/ggdb/info/gg038 | denotes | chondroitin-4-sulfotransferase-3 |
| T3 | 263-269 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T4 | 263-267 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T5 | 332-354 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 sulfotransferase |
| T6 | 356-364 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| T7 | 597-603 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T8 | 597-601 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T9 | 704-710 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| T10 | 806-812 | https://acgg.asia/db/ggdb/info/gg037 | denotes | C4ST-2 |
| T11 | 806-810 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T12 | 860-868 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| T13 | 876-918 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T14 | 932-976 | https://acgg.asia/db/ggdb/info/gg046 | denotes | N-acetylgalactosamine-4-O-sulfotransferase 2 |
| T15 | 932-974 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| T16 | 984-990 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T17 | 984-988 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T18 | 1156-1162 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T19 | 1156-1160 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T20 | 1290-1296 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T21 | 1290-1294 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T22 | 1409-1415 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T23 | 1409-1413 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T24 | 1420-1426 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| T25 | 1508-1514 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| T26 | 1508-1512 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| T27 | 1558-1564 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 42-53 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T2 | 100-105 | Glycan_Motif | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54406UD |
| T3 | 175-196 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T4 | 229-240 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T5 | 332-337 | Glycan_Motif | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54406UD |
| T6 | 356-361 | Glycan_Motif | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54406UD |
| T7 | 668-679 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T8 | 770-781 | Glycan_Motif | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT |
| T9 | 860-865 | Glycan_Motif | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54406UD |
| T10 | 876-897 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
| T11 | 932-953 | Glycan_Motif | denotes | N-acetylgalactosamine | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-77 | Sentence | denotes | Molecular cloning and characterization of chondroitin-4-O-sulfotransferase-3. |
| T2 | 78-134 | Sentence | denotes | A novel member of the HNK-1 family of sulfotransferases. |
| T3 | 135-366 | Sentence | denotes | We have identified and characterized an N-acetylgalactosamine-4-O-sulfotransferase designated chondroitin-4-sulfotransferase-3 (C4ST-3) (GenBank accession number AY120869) based on its homology to HNK-1 sulfotransferase (HNK-1 ST). |
| T4 | 367-596 | Sentence | denotes | The cDNA predicts an open reading frame encoding a type II membrane protein of 341 amino acids with a 12-amino acid cytoplasmic domain and a 311-amino acid luminal domain containing a single potential N-linked glycosylation site. |
| T5 | 597-983 | Sentence | denotes | C4ST-3 has the greatest amino acid sequence identity when aligned with chondroitin-4-O-sulfotransferase 1 (C4ST-1) (45%) but also shows significant amino acid identity with chondroitin-4-O-sulfotransferase 2 (C4ST-2) (27%), dermatan-4-O-sulfotransferase 1 (29%), HNK-1 ST (26%), N-acetylgalactosamine-4-O-sulfotransferase 1 (26%), and N-acetylgalactosamine-4-O-sulfotransferase 2 (23%). |
| T6 | 984-1129 | Sentence | denotes | C4ST-3 transfers sulfate to the C-4 hydroxyl of beta1,4-linked GalNAc that is substituted with a beta-linked glucuronic acid at the C-3 hydroxyl. |
| T7 | 1130-1224 | Sentence | denotes | The open reading frame of C4ST-3 is encoded by three exons located on human chromosome 3q21.3. |
| T8 | 1225-1289 | Sentence | denotes | Northern blot analysis reveals a single 2.1-kilobase transcript. |
| T9 | 1290-1399 | Sentence | denotes | C4ST-3 message is expressed in adult liver and at lower levels in adult kidney, lymph nodes, and fetal liver. |
| T10 | 1400-1565 | Sentence | denotes | Although C4ST-3 and C4ST-1 have similar specificities, the highly restricted pattern of expression seen for C4ST-3 suggests that it has a different role than C4ST-1. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 42-53 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T2 | 100-105 | https://glytoucan.org/Structures/Glycans/G54406UD | denotes | HNK-1 |
| T3 | 175-196 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T4 | 229-240 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T5 | 332-337 | https://glytoucan.org/Structures/Glycans/G54406UD | denotes | HNK-1 |
| T6 | 356-361 | https://glytoucan.org/Structures/Glycans/G54406UD | denotes | HNK-1 |
| T7 | 668-679 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T8 | 770-781 | https://glytoucan.org/Structures/Glycans/G43702JT | denotes | chondroitin |
| T9 | 860-865 | https://glytoucan.org/Structures/Glycans/G54406UD | denotes | HNK-1 |
| T10 | 876-897 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
| T11 | 932-953 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetylgalactosamine |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 42-53 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T2 | 100-105 | http://www.glycoepitope.jp/epitopes/EP0001 | denotes | HNK-1 |
| T3 | 229-240 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T4 | 332-337 | http://www.glycoepitope.jp/epitopes/EP0001 | denotes | HNK-1 |
| T5 | 356-361 | http://www.glycoepitope.jp/epitopes/EP0001 | denotes | HNK-1 |
| T6 | 668-679 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T7 | 770-781 | http://www.glycoepitope.jp/epitopes/EP0081 | denotes | chondroitin |
| T8 | 860-865 | http://www.glycoepitope.jp/epitopes/EP0001 | denotes | HNK-1 |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1327-1332 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T2 | 1362-1368 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T3 | 1370-1381 | http://purl.obolibrary.org/obo/MAT_0000197 | denotes | lymph nodes |
| T4 | 1370-1381 | http://purl.obolibrary.org/obo/MAT_0000442 | denotes | lymph nodes |
| T5 | 1370-1375 | http://purl.obolibrary.org/obo/MAT_0000055 | denotes | lymph |
| T6 | 1393-1398 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 175-217 | https://acgg.asia/db/ggdb/info/gg046 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T2 | 175-217 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T3 | 218-228 | url | denotes | designated |
| PD-GlycoGenes20190927-B_T4 | 263-269 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T5 | 263-267 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T6 | 332-354 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 sulfotransferase |
| PD-GlycoGenes20190927-B_T7 | 356-364 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| PD-GlycoGenes20190927-B_T8 | 423-425 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
| PD-GlycoGenes20190927-B_T9 | 597-603 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T10 | 597-601 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T11 | 604-607 | https://acgg.asia/db/ggdb/info/gg135 | denotes | has |
| PD-GlycoGenes20190927-B_T12 | 704-710 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| PD-GlycoGenes20190927-B_T13 | 806-812 | https://acgg.asia/db/ggdb/info/gg037 | denotes | C4ST-2 |
| PD-GlycoGenes20190927-B_T14 | 806-810 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T15 | 860-868 | https://acgg.asia/db/ggdb/info/gg035 | denotes | HNK-1 ST |
| PD-GlycoGenes20190927-B_T16 | 876-918 | https://acgg.asia/db/ggdb/info/gg046 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T17 | 876-918 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T18 | 932-974 | https://acgg.asia/db/ggdb/info/gg046 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T19 | 932-974 | https://acgg.asia/db/ggdb/info/gg045 | denotes | N-acetylgalactosamine-4-O-sulfotransferase |
| PD-GlycoGenes20190927-B_T20 | 984-990 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T21 | 984-988 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T22 | 1156-1162 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T23 | 1156-1160 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T24 | 1290-1296 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T25 | 1290-1294 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T26 | 1409-1415 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T27 | 1409-1413 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T28 | 1420-1426 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
| PD-GlycoGenes20190927-B_T29 | 1508-1514 | https://acgg.asia/db/ggdb/info/gg038 | denotes | C4ST-3 |
| PD-GlycoGenes20190927-B_T30 | 1508-1512 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST |
| PD-GlycoGenes20190927-B_T31 | 1532-1535 | https://acgg.asia/db/ggdb/info/gg135 | denotes | has |
| PD-GlycoGenes20190927-B_T32 | 1558-1564 | https://acgg.asia/db/ggdb/info/gg036 | denotes | C4ST-1 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1327-1332 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T2 | 1362-1368 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T3 | 1370-1381 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/MAT_0000197|http://purl.obolibrary.org/obo/MAT_0000442 |
| T5 | 1393-1398 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 42-53 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 100-105 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T3 | 229-240 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T4 | 332-337 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T5 | 356-361 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T6 | 668-679 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T7 | 770-781 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 860-865 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T9 | 1047-1053 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 42-53 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 100-105 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T3 | 229-240 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T4 | 332-337 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T5 | 356-361 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T6 | 668-679 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T7 | 770-781 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T8 | 860-865 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 1200-1205 | OrganismTaxon | denotes | human | 9606 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 426-434 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 483-494 | Body_part | denotes | cytoplasmic | http://purl.obolibrary.org/obo/GO_0005737 |
| T5 | 1206-1216 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
| T6 | 1327-1332 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T7 | 1362-1381 | Body_part | denotes | kidney, lymph nodes | http://purl.obolibrary.org/obo/UBERON_0003425 |
| T8 | 1393-1398 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-77 | Sentence | denotes | Molecular cloning and characterization of chondroitin-4-O-sulfotransferase-3. |
| T2 | 78-134 | Sentence | denotes | A novel member of the HNK-1 family of sulfotransferases. |
| T3 | 135-366 | Sentence | denotes | We have identified and characterized an N-acetylgalactosamine-4-O-sulfotransferase designated chondroitin-4-sulfotransferase-3 (C4ST-3) (GenBank accession number AY120869) based on its homology to HNK-1 sulfotransferase (HNK-1 ST). |
| T4 | 367-596 | Sentence | denotes | The cDNA predicts an open reading frame encoding a type II membrane protein of 341 amino acids with a 12-amino acid cytoplasmic domain and a 311-amino acid luminal domain containing a single potential N-linked glycosylation site. |
| T5 | 597-983 | Sentence | denotes | C4ST-3 has the greatest amino acid sequence identity when aligned with chondroitin-4-O-sulfotransferase 1 (C4ST-1) (45%) but also shows significant amino acid identity with chondroitin-4-O-sulfotransferase 2 (C4ST-2) (27%), dermatan-4-O-sulfotransferase 1 (29%), HNK-1 ST (26%), N-acetylgalactosamine-4-O-sulfotransferase 1 (26%), and N-acetylgalactosamine-4-O-sulfotransferase 2 (23%). |
| T6 | 984-1129 | Sentence | denotes | C4ST-3 transfers sulfate to the C-4 hydroxyl of beta1,4-linked GalNAc that is substituted with a beta-linked glucuronic acid at the C-3 hydroxyl. |
| T7 | 1130-1224 | Sentence | denotes | The open reading frame of C4ST-3 is encoded by three exons located on human chromosome 3q21.3. |
| T8 | 1225-1289 | Sentence | denotes | Northern blot analysis reveals a single 2.1-kilobase transcript. |
| T9 | 1290-1399 | Sentence | denotes | C4ST-3 message is expressed in adult liver and at lower levels in adult kidney, lymph nodes, and fetal liver. |
| T10 | 1400-1565 | Sentence | denotes | Although C4ST-3 and C4ST-1 have similar specificities, the highly restricted pattern of expression seen for C4ST-3 suggests that it has a different role than C4ST-1. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-77 | Sentence | denotes | Molecular cloning and characterization of chondroitin-4-O-sulfotransferase-3. |
| T2 | 78-134 | Sentence | denotes | A novel member of the HNK-1 family of sulfotransferases. |
| T3 | 135-366 | Sentence | denotes | We have identified and characterized an N-acetylgalactosamine-4-O-sulfotransferase designated chondroitin-4-sulfotransferase-3 (C4ST-3) (GenBank accession number AY120869) based on its homology to HNK-1 sulfotransferase (HNK-1 ST). |
| T4 | 367-596 | Sentence | denotes | The cDNA predicts an open reading frame encoding a type II membrane protein of 341 amino acids with a 12-amino acid cytoplasmic domain and a 311-amino acid luminal domain containing a single potential N-linked glycosylation site. |
| T5 | 597-983 | Sentence | denotes | C4ST-3 has the greatest amino acid sequence identity when aligned with chondroitin-4-O-sulfotransferase 1 (C4ST-1) (45%) but also shows significant amino acid identity with chondroitin-4-O-sulfotransferase 2 (C4ST-2) (27%), dermatan-4-O-sulfotransferase 1 (29%), HNK-1 ST (26%), N-acetylgalactosamine-4-O-sulfotransferase 1 (26%), and N-acetylgalactosamine-4-O-sulfotransferase 2 (23%). |
| T6 | 984-1129 | Sentence | denotes | C4ST-3 transfers sulfate to the C-4 hydroxyl of beta1,4-linked GalNAc that is substituted with a beta-linked glucuronic acid at the C-3 hydroxyl. |
| T7 | 1130-1224 | Sentence | denotes | The open reading frame of C4ST-3 is encoded by three exons located on human chromosome 3q21.3. |
| T8 | 1225-1289 | Sentence | denotes | Northern blot analysis reveals a single 2.1-kilobase transcript. |
| T9 | 1290-1399 | Sentence | denotes | C4ST-3 message is expressed in adult liver and at lower levels in adult kidney, lymph nodes, and fetal liver. |
| T10 | 1400-1565 | Sentence | denotes | Although C4ST-3 and C4ST-1 have similar specificities, the highly restricted pattern of expression seen for C4ST-3 suggests that it has a different role than C4ST-1. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 42-53 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T2 | 100-105 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T3 | 229-240 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T4 | 332-337 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T5 | 356-361 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
| T6 | 668-679 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T7 | 770-781 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | chondroitin | http://www.glycoepitope.jp/epitopes/EP0081 |
| T8 | 860-865 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | HNK-1 | http://www.glycoepitope.jp/epitopes/EP0001 |
GlyCosmos15-FMA
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 483-494 | Body_part | denotes | cytoplasmic | FMA:66835 |
| T2 | 1206-1216 | Body_part | denotes | chromosome | FMA:67093 |
| T3 | 1327-1332 | Body_part | denotes | liver | FMA:7197 |
| T4 | 1362-1368 | Body_part | denotes | kidney | FMA:7203 |
| T5 | 1370-1381 | Body_part | denotes | lymph nodes | FMA:5034 |
| T6 | 1393-1398 | Body_part | denotes | liver | FMA:7197 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1327-1332 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T2 | 1362-1368 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T3 | 1370-1381 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/MAT_0000197|http://purl.obolibrary.org/obo/MAT_0000442 |
| T5 | 1393-1398 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 42-53 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T2 | 100-105 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T3 | 229-240 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T4 | 332-337 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T5 | 356-361 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T6 | 668-679 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T7 | 770-781 | Glycan | denotes | chondroitin | https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT |
| T8 | 860-865 | Glycan | denotes | HNK-1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54406UD |
| T9 | 1047-1053 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 1200-1205 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 426-434 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 483-494 | Body_part | denotes | cytoplasmic | http://purl.obolibrary.org/obo/GO_0005737 |
| T5 | 1206-1216 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
| T6 | 1327-1332 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T7 | 1362-1381 | Body_part | denotes | kidney, lymph nodes | http://purl.obolibrary.org/obo/UBERON_0003425 |
| T8 | 1393-1398 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |