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PubMed:11815617 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-119 Sentence denotes Two proteins essential for apolipoprotein B mRNA editing are expressed from a single gene through alternative splicing.
T2 120-275 Sentence denotes Apolipoprotein B (apoB) mRNA editing involves site-specific deamination of cytidine to form uridine, resulting in the production of an in-frame stop codon.
T3 276-452 Sentence denotes Protein translated from edited mRNA is associated with a reduced risk of atherosclerosis, and hence the protein factors that regulate hepatic apoB mRNA editing are of interest.
T4 453-587 Sentence denotes A human protein essential for apoB mRNA editing and an eight-amino acid-longer variant of no known function have been recently cloned.
T5 588-758 Sentence denotes We report that both proteins, henceforth referred to as ACF64 and ACF65, supported APOBEC-1 (the catalytic subunit of the editosome) equivalently in editing of apoB mRNA.
T6 759-816 Sentence denotes They are encoded by a single 82-kb gene on chromosome 10.
T7 817-961 Sentence denotes The transcripts are encoded by 15 exons that are expressed from a tissue-specific promoter minimally contained within the -0.33-kb DNA sequence.
T8 962-1061 Sentence denotes ACF64 and ACF65 mRNAs are expressed in both liver and intestinal cells in an approximate 1:4 ratio.
T9 1062-1191 Sentence denotes Exon 11 is alternatively spliced to include or exclude 24 nucleotides of exon 12, thereby encoding ACF65 and ACF64, respectively.
T10 1192-1349 Sentence denotes Recognition motifs for the serine/arginine-rich (SR) proteins SC35, SRp40, SRp55, and SF2/ASF involved in alternative RNA splicing were predicted in exon 12.
T11 1350-1519 Sentence denotes Overexpression of these SR proteins in liver cells demonstrated that alternative splicing of a minigene-derived transcript to express ACF65 was enhanced 6-fold by SRp40.
T12 1520-1655 Sentence denotes The data account for the expression of two editing factors and provide a possible explanation for their different levels of expression.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1006-1011 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T2 1016-1026 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T3 1389-1394 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

FSU-PRGE

Id Subject Object Predicate Lexical cue
T1 27-43 protein denotes apolipoprotein B
T2 120-136 protein denotes Apolipoprotein B
T3 138-142 protein denotes apoB
T4 418-422 protein denotes apoB
T5 483-487 protein denotes apoB
T6 644-649 protein denotes ACF64
T7 654-659 protein denotes ACF65
T8 671-679 protein denotes APOBEC-1
T9 748-752 protein denotes apoB
T10 962-967 protein denotes ACF64
T11 972-977 protein denotes ACF65
T12 1161-1166 protein denotes ACF65
T13 1171-1176 protein denotes ACF64
T14 1254-1258 protein denotes SC35
T15 1260-1265 protein denotes SRp40
T16 1267-1272 protein denotes SRp55
T17 1278-1281 protein denotes SF2
T18 1282-1285 protein denotes ASF
T19 1484-1489 protein denotes ACF65
T20 1513-1518 protein denotes SRp40

PIR-corpus2

Id Subject Object Predicate Lexical cue
T1 27-43 protein denotes apolipoprotein B
T2 121-143 protein denotes polipoprotein B (apoB)
T3 410-422 protein denotes hepatic apoB
T4 483-487 protein denotes apoB
T5 644-649 protein denotes ACF64
T6 654-659 protein denotes ACF65
T7 671-679 protein denotes APOBEC-1
T8 685-719 protein denotes catalytic subunit of the editosome
T9 748-752 protein denotes apoB
T10 962-967 protein denotes ACF64
T11 972-977 protein denotes ACF65
T12 1161-1166 protein denotes ACF65
T13 1171-1176 protein denotes ACF64
T14 1219-1258 protein denotes serine/arginine-rich (SR) proteins SC35
T15 1260-1265 protein denotes SRp40
T16 1267-1272 protein denotes SRp55
T17 1278-1281 protein denotes SF2
T18 1282-1285 protein denotes ASF
T19 1374-1385 protein denotes SR proteins
T20 1484-1489 protein denotes ACF65
T21 1513-1518 protein denotes SRp40

PIR-corpus1

Id Subject Object Predicate Lexical cue
T1 4-12 protein denotes proteins
T2 121-136 protein denotes polipoprotein B
T3 138-142 acronym denotes apoB
T4 276-283 protein denotes Protein
T5 380-395 protein denotes protein factors
T6 461-468 protein denotes protein
T7 608-616 protein denotes proteins
T8 644-649 protein denotes ACF64
T9 654-659 protein denotes ACF65
T10 671-679 protein denotes APOBEC-1
T11 685-719 protein denotes catalytic subunit of the editosome
T12 1161-1166 protein denotes ACF65
T13 1171-1176 protein denotes ACF64
T14 1219-1253 protein denotes serine/arginine-rich (SR) proteins
T15 1254-1258 protein denotes SC35
T16 1260-1265 protein denotes SRp40
T17 1267-1272 protein denotes SRp55
T18 1278-1285 protein denotes SF2/ASF
T19 1374-1385 protein denotes SR proteins
T20 1484-1489 protein denotes ACF65
T21 1513-1518 protein denotes SRp40
T22 1563-1578 protein denotes editing factors

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 349-364 Phenotype denotes atherosclerosis HP:0002621

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 349-364 Disease denotes atherosclerosis http://purl.obolibrary.org/obo/MONDO_0005311

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 455-460 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 802-812 Body_part denotes chromosome http://purl.obolibrary.org/obo/GO_0005694
T2 883-889 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T3 1006-1011 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T4 1389-1394 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1006-1011 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T2 1016-1026 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043
T3 1389-1394 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097