PubMed:11244106
Annnotations
Oryza-OGER
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 17-21 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T2 | 17-21 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T3 | 17-21 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T4 | 65-80 | KARMA | denotes | retrotransposon |
| T5 | 65-80 | http://id.nlm.nih.gov/mesh/D018626 | denotes | retrotransposon |
| T6 | 65-80 | http://purl.obolibrary.org/obo/SO_0000180 | denotes | retrotransposon |
| T7 | 65-86 | TOS17 | denotes | retrotransposon Tos17 |
| T8 | 81-84 | http://purl.obolibrary.org/obo/PR_P0A7I4 | denotes | Tos |
| T9 | 81-84 | http://purl.obolibrary.org/obo/PR_Q24558 | denotes | Tos |
| T10 | 81-84 | http://purl.obolibrary.org/obo/PR_000023590 | denotes | Tos |
| T11 | 81-84 | http://purl.obolibrary.org/obo/UBERON_0002612 | denotes | Tos |
| T12 | 81-86 | TOS17 | denotes | Tos17 |
| T13 | 87-96 | http://purl.obolibrary.org/obo/SO_0000667 | denotes | insertion |
| T14 | 111-121 | http://purl.obolibrary.org/obo/CHEBI_27547 | denotes | zeaxanthin |
| T15 | 111-121 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T16 | 111-121 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T17 | 111-121 | http://purl.bioontology.org/ontology/RXNORM/39918 | denotes | zeaxanthin |
| T18 | 111-131 | http://id.nlm.nih.gov/mesh/C097153 | denotes | zeaxanthin epoxidase |
| T19 | 111-131 | ABA1 | denotes | zeaxanthin epoxidase |
| T20 | 122-131 | http://id.nlm.nih.gov/mesh/C023111 | denotes | epoxidase |
| T21 | 132-136 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T22 | 137-140 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T23 | 137-140 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T24 | 149-155 | http://www.uniprot.org/uniprot/Q9AVE6 | denotes | ostatc |
| T25 | 149-155 | TATC | denotes | ostatc |
| T26 | 156-160 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T27 | 166-170 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T28 | 166-170 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T29 | 166-170 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T30 | 172-177 | http://id.nlm.nih.gov/mesh/D012275 | denotes | Oryza |
| T31 | 172-184 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | Oryza sativa |
| T32 | 172-184 | http://id.nlm.nih.gov/mesh/D012275 | denotes | Oryza sativa |
| T33 | 186-201 | KARMA | denotes | retrotransposon |
| T34 | 186-201 | http://id.nlm.nih.gov/mesh/D018626 | denotes | retrotransposon |
| T35 | 186-201 | http://purl.obolibrary.org/obo/SO_0000180 | denotes | retrotransposon |
| T36 | 186-207 | TOS17 | denotes | retrotransposon Tos17 |
| T37 | 202-205 | http://purl.obolibrary.org/obo/PR_P0A7I4 | denotes | Tos |
| T38 | 202-205 | http://purl.obolibrary.org/obo/PR_Q24558 | denotes | Tos |
| T39 | 202-205 | http://purl.obolibrary.org/obo/PR_000023590 | denotes | Tos |
| T40 | 202-205 | http://purl.obolibrary.org/obo/UBERON_0002612 | denotes | Tos |
| T41 | 202-207 | TOS17 | denotes | Tos17 |
| T42 | 211-214 | http://web.expasy.org/cellosaurus/CVCL_Z424 | denotes | one |
| T43 | 211-214 | http://purl.obolibrary.org/obo/CHEBI_58972 | denotes | one |
| T44 | 231-247 | http://id.nlm.nih.gov/mesh/D018626 | denotes | retrotransposons |
| T45 | 251-257 | http://id.nlm.nih.gov/mesh/D010944 | denotes | plants |
| T46 | 258-261 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T47 | 258-261 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T48 | 266-279 | http://purl.obolibrary.org/obo/GO_0032196 | denotes | transposition |
| T49 | 266-279 | http://purl.obolibrary.org/obo/SO_0000453 | denotes | transposition |
| T50 | 296-302 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T51 | 375-379 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T52 | 375-379 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T53 | 375-379 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
| T54 | 391-397 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T55 | 451-466 | KARMA | denotes | retrotransposon |
| T56 | 451-466 | http://id.nlm.nih.gov/mesh/D018626 | denotes | retrotransposon |
| T57 | 451-466 | http://purl.obolibrary.org/obo/SO_0000180 | denotes | retrotransposon |
| T58 | 451-472 | TOS17 | denotes | retrotransposon Tos17 |
| T59 | 467-470 | http://purl.obolibrary.org/obo/PR_P0A7I4 | denotes | Tos |
| T60 | 467-470 | http://purl.obolibrary.org/obo/PR_Q24558 | denotes | Tos |
| T61 | 467-470 | http://purl.obolibrary.org/obo/PR_000023590 | denotes | Tos |
| T62 | 467-470 | http://purl.obolibrary.org/obo/UBERON_0002612 | denotes | Tos |
| T63 | 467-472 | TOS17 | denotes | Tos17 |
| T64 | 490-501 | http://purl.obolibrary.org/obo/SO_0001522 | denotes | insertional |
| T65 | 502-509 | http://purl.obolibrary.org/obo/CHEBI_25435 | denotes | mutagen |
| T66 | 502-509 | http://purl.obolibrary.org/obo/SO_0001148 | denotes | mutagen |
| T67 | 510-513 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T68 | 510-513 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T69 | 536-540 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T70 | 541-544 | http://purl.obolibrary.org/obo/PR_Q9NZC7 | denotes | for |
| T71 | 541-544 | http://purl.obolibrary.org/obo/PR_000001036 | denotes | for |
| T72 | 545-552 | http://purl.obolibrary.org/obo/SO_0001030 | denotes | forward |
| T73 | 580-584 | http://purl.obolibrary.org/obo/SO_0000704 | denotes | gene |
| T74 | 638-647 | http://purl.obolibrary.org/obo/SO_0000667 | denotes | insertion |
| T75 | 651-654 | http://purl.obolibrary.org/obo/PR_P0A7I4 | denotes | Tos |
| T76 | 651-654 | http://purl.obolibrary.org/obo/PR_Q24558 | denotes | Tos |
| T77 | 651-654 | http://purl.obolibrary.org/obo/PR_000023590 | denotes | Tos |
| T78 | 651-654 | http://purl.obolibrary.org/obo/UBERON_0002612 | denotes | Tos |
| T79 | 651-656 | TOS17 | denotes | Tos17 |
| T80 | 658-664 | ABA1 | denotes | Osaba1 |
| T81 | 658-664 | http://www.uniprot.org/uniprot/Q0JCU7 | denotes | Osaba1 |
| T82 | 729-742 | http://purl.obolibrary.org/obo/CHEBI_28937 | denotes | abscisic acid |
| T83 | 729-742 | http://purl.obolibrary.org/obo/CHEBI_22152 | denotes | abscisic acid |
| T84 | 729-742 | ASR1 | denotes | abscisic acid |
| T85 | 729-742 | http://purl.obolibrary.org/obo/CHEBI_2365 | denotes | abscisic acid |
| T86 | 729-742 | http://purl.obolibrary.org/obo/CHEBI_62431 | denotes | abscisic acid |
| T87 | 729-742 | ASR5 | denotes | abscisic acid |
| T88 | 729-742 | http://id.nlm.nih.gov/mesh/D000040 | denotes | abscisic acid |
| T89 | 729-742 | http://id.nlm.nih.gov/mesh/D000040 | denotes | abscisic acid |
| T90 | 738-742 | http://purl.obolibrary.org/obo/CHEBI_37527 | denotes | acid |
| T91 | 749-752 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T92 | 749-752 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T93 | 850-861 | http://purl.obolibrary.org/obo/MOP_0000671 | denotes | epoxidation |
| T94 | 865-875 | http://purl.obolibrary.org/obo/CHEBI_27547 | denotes | zeaxanthin |
| T95 | 865-875 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T96 | 865-875 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T97 | 865-875 | http://purl.bioontology.org/ontology/RXNORM/39918 | denotes | zeaxanthin |
| T98 | 884-889 | http://www.ncbi.nlm.nih.gov/taxonomy/32644 | denotes | other |
| T99 | 890-894 | http://purl.obolibrary.org/obo/UBERON_0002398 | denotes | hand |
| T100 | 890-894 | http://purl.obolibrary.org/obo/PR_000027804 | denotes | hand |
| T101 | 896-902 | http://www.uniprot.org/uniprot/Q9AVE6 | denotes | Ostatc |
| T102 | 896-902 | TATC | denotes | Ostatc |
| T103 | 969-972 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T104 | 969-972 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T105 | 992-1005 | http://purl.obolibrary.org/obo/CHEBI_28937 | denotes | abscisic acid |
| T106 | 992-1005 | http://purl.obolibrary.org/obo/CHEBI_22152 | denotes | abscisic acid |
| T107 | 992-1005 | ASR1 | denotes | abscisic acid |
| T108 | 992-1005 | http://purl.obolibrary.org/obo/CHEBI_2365 | denotes | abscisic acid |
| T109 | 992-1005 | http://purl.obolibrary.org/obo/CHEBI_62431 | denotes | abscisic acid |
| T110 | 992-1005 | ASR5 | denotes | abscisic acid |
| T111 | 992-1005 | http://id.nlm.nih.gov/mesh/D000040 | denotes | abscisic acid |
| T112 | 992-1005 | http://id.nlm.nih.gov/mesh/D000040 | denotes | abscisic acid |
| T113 | 1001-1005 | http://purl.obolibrary.org/obo/CHEBI_37527 | denotes | acid |
| T114 | 1035-1040 | http://purl.obolibrary.org/obo/CHEBI_46882 | denotes | amino |
| T115 | 1035-1046 | http://purl.bioontology.org/ontology/RXNORM/1873122 | denotes | amino acids |
| T116 | 1035-1046 | http://id.nlm.nih.gov/mesh/D000596 | denotes | amino acids |
| T117 | 1035-1046 | http://id.nlm.nih.gov/mesh/D000596 | denotes | amino acids |
| T118 | 1035-1046 | http://purl.obolibrary.org/obo/CHEBI_33709 | denotes | amino acids |
| T119 | 1035-1046 | http://purl.obolibrary.org/obo/CHEBI_33704 | denotes | amino acids |
| T120 | 1041-1046 | http://id.nlm.nih.gov/mesh/D000143 | denotes | acids |
| T121 | 1041-1046 | http://purl.obolibrary.org/obo/CHEBI_37527 | denotes | acids |
| T122 | 1041-1046 | http://id.nlm.nih.gov/mesh/D000143 | denotes | acids |
| T123 | 1073-1079 | ABA1 | denotes | Osaba1 |
| T124 | 1073-1079 | http://www.uniprot.org/uniprot/Q0JCU7 | denotes | Osaba1 |
| T125 | 1080-1083 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T126 | 1080-1083 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T127 | 1084-1090 | http://www.uniprot.org/uniprot/Q9AVE6 | denotes | Ostatc |
| T128 | 1084-1090 | TATC | denotes | Ostatc |
| T129 | 1137-1147 | http://purl.obolibrary.org/obo/CHEBI_27547 | denotes | zeaxanthin |
| T130 | 1137-1147 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T131 | 1137-1147 | http://id.nlm.nih.gov/mesh/D065146 | denotes | zeaxanthin |
| T132 | 1137-1147 | http://purl.bioontology.org/ontology/RXNORM/39918 | denotes | zeaxanthin |
| T133 | 1137-1157 | http://id.nlm.nih.gov/mesh/C097153 | denotes | zeaxanthin epoxidase |
| T134 | 1137-1157 | ABA1 | denotes | zeaxanthin epoxidase |
| T135 | 1148-1157 | http://id.nlm.nih.gov/mesh/C023111 | denotes | epoxidase |
| T136 | 1172-1177 | http://www.ncbi.nlm.nih.gov/taxonomy/32644 | denotes | other |
| T137 | 1178-1183 | http://id.nlm.nih.gov/mesh/D010944 | denotes | plant |
| T138 | 1192-1195 | http://purl.obolibrary.org/obo/PR_P49258 | denotes | and |
| T139 | 1192-1195 | http://www.ncbi.nlm.nih.gov/taxonomy/1481724 | denotes | and |
| T140 | 1211-1214 | http://purl.obolibrary.org/obo/CHEBI_32745 | denotes | Sec |
| T141 | 1211-1214 | http://purl.obolibrary.org/obo/SO_0001455 | denotes | Sec |
| T142 | 1211-1214 | http://purl.obolibrary.org/obo/CHEBI_32746 | denotes | Sec |
| T143 | 1211-1214 | http://purl.obolibrary.org/obo/CHEBI_30000 | denotes | Sec |
| T144 | 1211-1214 | http://purl.obolibrary.org/obo/PR_P17257 | denotes | Sec |
| T145 | 1211-1214 | http://purl.obolibrary.org/obo/CHEBI_30003 | denotes | Sec |
| T146 | 1211-1214 | http://web.expasy.org/cellosaurus/CVCL_E825 | denotes | Sec |
| T147 | 1211-1214 | http://purl.obolibrary.org/obo/PR_Q9M8Y0 | denotes | Sec |
| T148 | 1239-1243 | http://purl.obolibrary.org/obo/PR_P69423 | denotes | TATC |
| T149 | 1239-1243 | http://purl.obolibrary.org/obo/PR_000024030 | denotes | TATC |
| T150 | 1239-1243 | TATC | denotes | TATC |
| T151 | 1239-1243 | http://purl.obolibrary.org/obo/PR_Q9SJV5 | denotes | TATC |
| T152 | 1244-1251 | http://purl.obolibrary.org/obo/CHEBI_11122 | denotes | protein |
| T153 | 1244-1251 | http://purl.obolibrary.org/obo/SO_0000104 | denotes | protein |
| T154 | 1244-1251 | http://purl.obolibrary.org/obo/PR_000000001 | denotes | protein |
| T155 | 1244-1251 | http://purl.obolibrary.org/obo/CHEBI_16541 | denotes | protein |
| T156 | 1244-1251 | http://purl.obolibrary.org/obo/GO_0003675 | denotes | protein |
| T157 | 1244-1251 | http://purl.obolibrary.org/obo/CHEBI_36080 | denotes | protein |
| T158 | 1267-1271 | http://purl.obolibrary.org/obo/PR_000024065 | denotes | This |
| T159 | 1267-1271 | http://purl.obolibrary.org/obo/PR_O32583 | denotes | This |
| T160 | 1296-1306 | http://purl.obolibrary.org/obo/SO_0000101 | denotes | transposon |
| T161 | 1318-1322 | http://id.nlm.nih.gov/mesh/D012275 | denotes | rice |
| T162 | 1318-1322 | http://purl.bioontology.org/ontology/RXNORM/1311040 | denotes | rice |
| T163 | 1318-1322 | http://www.ncbi.nlm.nih.gov/taxonomy/4530 | denotes | rice |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_5 | 353-371 | xzyao:15097 | denotes | viviparous mutants |
| M_6 | 81-86 | hunflair:NA:Gene | denotes | Tos17 |
| M_7 | 202-207 | hunflair:NA:Gene | denotes | Tos17 |
| M_8 | 467-472 | hunflair:NA:Gene | denotes | Tos17 |
| M_9 | 651-656 | hunflair:NA:Gene | denotes | Tos17 |
| M_10 | 172-184 | hunflair:NA:Species | denotes | Oryza sativa |
| M_0 | 729-742 | funRiceGene:339, xzyao:8823 | denotes | abscisic acid |
| M_1 | 992-1005 | funRiceGene:339, xzyao:8823 | denotes | abscisic acid |
| M_2 | 959-968 | WTO:0000005 | denotes | phenotype |
| M_3 | 725-748 | xzyao:6508 | denotes | low abscisic acid level |
| M_4 | 729-748 | xzyao:10520 | denotes | abscisic acid level |
| M_11 | 729-742 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_12 | 992-1005 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_13 | 1211-1214 | hunflair:NA:Gene | denotes | Sec |
| M_14 | 111-131 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_15 | 1137-1157 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_16 | 17-21 | hunflair:NA:Species | denotes | rice |
| M_17 | 166-170 | hunflair:NA:Species | denotes | rice |
| M_18 | 375-379 | hunflair:NA:Species | denotes | rice |
| M_19 | 1318-1322 | hunflair:NA:Species | denotes | rice |
| M_20 | 1211-1214 | hunflair:NA:Chemical | denotes | Sec |
| M_21 | 1201-1210 | hunflair:NA:Species | denotes | bacterial |
| M_22 | 1227-1251 | hunflair:NA:Gene | denotes | translocase TATC protein |
| M_23 | 658-664 | hunflair:NA:Gene | denotes | Osaba1 |
| M_24 | 1073-1079 | hunflair:NA:Gene | denotes | Osaba1 |
| M_25 | 1035-1046 | hunflair:NA:Chemical | denotes | amino acids |
| M_26 | 896-902 | hunflair:NA:Gene | denotes | Ostatc |
| M_27 | 1084-1090 | hunflair:NA:Gene | denotes | Ostatc |
| M_28 | 111-121 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_29 | 865-875 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_30 | 1137-1147 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_31 | 149-155 | hunflair:NA:Gene | denotes | ostatc |
| M_32 | 172-184 | pubtator:4530:Species | denotes | Oryza sativa |
| M_33 | 729-742 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_34 | 992-1005 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_35 | 111-121 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_36 | 865-875 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_37 | 1137-1147 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_38 | 17-21 | pubtator:4530:Species | denotes | rice |
| M_39 | 166-170 | pubtator:4530:Species | denotes | rice |
| M_40 | 375-379 | pubtator:4530:Species | denotes | rice |
| M_41 | 1318-1322 | pubtator:4530:Species | denotes | rice |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 65-86 | http://identifiers.org/oryzabase.gene/2982 | denotes | retrotransposon Tos17 |
| T2 | 111-131 | http://identifiers.org/oryzabase.gene/6080 | denotes | zeaxanthin epoxidase |
| T3 | 149-155 | http://identifiers.org/oryzabase.gene/6298 | denotes | ostatc |
| T4 | 186-207 | http://identifiers.org/oryzabase.gene/2982 | denotes | retrotransposon Tos17 |
| T5 | 451-472 | http://identifiers.org/oryzabase.gene/2982 | denotes | retrotransposon Tos17 |
| T6 | 651-656 | http://identifiers.org/oryzabase.gene/2982 | denotes | Tos17 |
| T7 | 658-664 | http://identifiers.org/oryzabase.gene/6080 | denotes | Osaba1 |
| T8 | 729-742 | http://identifiers.org/oryzabase.gene/8408 | denotes | abscisic acid |
| T9 | 992-1005 | http://identifiers.org/oryzabase.gene/8408 | denotes | abscisic acid |
| T10 | 1073-1079 | http://identifiers.org/oryzabase.gene/6080 | denotes | Osaba1 |
| T11 | 1137-1157 | http://identifiers.org/oryzabase.gene/6080 | denotes | zeaxanthin epoxidase |
| T12 | 1239-1243 | http://identifiers.org/oryzabase.gene/6298 | denotes | TATC |
| T65726 | 111-131 | http://identifiers.org/ricegap/LOC_Os04g37619 | denotes | zeaxanthin epoxidase |
| T36174 | 149-155 | http://identifiers.org/ricegap/LOC_Os01g31680 | denotes | ostatc |
| T57807 | 658-664 | http://identifiers.org/ricegap/LOC_Os04g37619 | denotes | Osaba1 |
| T94051 | 729-742 | http://identifiers.org/ricegap/LOC_Os11g06720 | denotes | abscisic acid |
| T61842 | 896-902 | http://identifiers.org/ricegap/LOC_Os01g31680 | denotes | Ostatc |
| T31525 | 992-1005 | http://identifiers.org/ricegap/LOC_Os11g06720 | denotes | abscisic acid |
| T35844 | 1073-1079 | http://identifiers.org/ricegap/LOC_Os04g37619 | denotes | Osaba1 |
| T47215 | 1084-1090 | http://identifiers.org/ricegap/LOC_Os01g31680 | denotes | Ostatc |
| T63745 | 1137-1157 | http://identifiers.org/ricegap/LOC_Os04g37619 | denotes | zeaxanthin epoxidase |
| T6039 | 1239-1243 | http://identifiers.org/ricegap/LOC_Os01g31680 | denotes | TATC |
| T51863 | 111-131 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | zeaxanthin epoxidase |
| T44678 | 149-155 | http://identifiers.org/rapdb.locus/Os01g0501700 | denotes | ostatc |
| T85638 | 658-664 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | Osaba1 |
| T32944 | 729-742 | http://identifiers.org/rapdb.locus/Os11g0167800 | denotes | abscisic acid |
| T93277 | 896-902 | http://identifiers.org/rapdb.locus/Os01g0501700 | denotes | Ostatc |
| T15499 | 992-1005 | http://identifiers.org/rapdb.locus/Os11g0167800 | denotes | abscisic acid |
| T85582 | 1073-1079 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | Osaba1 |
| T49128 | 1084-1090 | http://identifiers.org/rapdb.locus/Os01g0501700 | denotes | Ostatc |
| T33911 | 1137-1157 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | zeaxanthin epoxidase |
| T38826 | 1239-1243 | http://identifiers.org/rapdb.locus/Os01g0501700 | denotes | TATC |
| T45284 | 111-131 | http://identifiers.org/uniprot/Q0JCU7 | denotes | zeaxanthin epoxidase |
| T23117 | 658-664 | http://identifiers.org/uniprot/Q0JCU7 | denotes | Osaba1 |
| T24298 | 729-742 | http://identifiers.org/uniprot/Q53JF7 | denotes | abscisic acid |
| T14596 | 992-1005 | http://identifiers.org/uniprot/Q53JF7 | denotes | abscisic acid |
| T2391 | 1073-1079 | http://identifiers.org/uniprot/Q0JCU7 | denotes | Osaba1 |
| T71629 | 1137-1157 | http://identifiers.org/uniprot/Q0JCU7 | denotes | zeaxanthin epoxidase |
| T86142 | 1239-1243 | http://identifiers.org/uniprot/Q94G17 | denotes | TATC |
| M_0 | 111-121 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_1 | 865-875 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_2 | 1137-1147 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_3 | 111-131 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_4 | 1137-1157 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_5 | 896-902 | hunflair:NA:Gene | denotes | Ostatc |
| M_6 | 1084-1090 | hunflair:NA:Gene | denotes | Ostatc |
| M_7 | 149-155 | hunflair:NA:Gene | denotes | ostatc |
| M_8 | 172-184 | hunflair:NA:Species | denotes | Oryza sativa |
| M_9 | 1211-1214 | hunflair:NA:Chemical | denotes | Sec |
| M_10 | 1211-1214 | hunflair:NA:Gene | denotes | Sec |
| M_11 | 1201-1210 | hunflair:NA:Species | denotes | bacterial |
| M_12 | 1035-1046 | hunflair:NA:Chemical | denotes | amino acids |
| M_13 | 1227-1251 | hunflair:NA:Gene | denotes | translocase TATC protein |
| M_14 | 729-742 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_15 | 992-1005 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_16 | 17-21 | hunflair:NA:Species | denotes | rice |
| M_17 | 166-170 | hunflair:NA:Species | denotes | rice |
| M_18 | 375-379 | hunflair:NA:Species | denotes | rice |
| M_19 | 1318-1322 | hunflair:NA:Species | denotes | rice |
| M_20 | 81-86 | hunflair:NA:Gene | denotes | Tos17 |
| M_21 | 202-207 | hunflair:NA:Gene | denotes | Tos17 |
| M_22 | 467-472 | hunflair:NA:Gene | denotes | Tos17 |
| M_23 | 651-656 | hunflair:NA:Gene | denotes | Tos17 |
| M_24 | 658-664 | hunflair:NA:Gene | denotes | Osaba1 |
| M_25 | 1073-1079 | hunflair:NA:Gene | denotes | Osaba1 |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 65-80 | http://identifiers.org/oryzabase.gene/2983 | denotes | retrotransposon |
| T2 | 186-201 | http://identifiers.org/oryzabase.gene/2983 | denotes | retrotransposon |
| T3 | 451-466 | http://identifiers.org/oryzabase.gene/2983 | denotes | retrotransposon |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 81-86 | http://identifiers.org/oryzabase.gene/2982 | denotes | Tos17 |
| T2 | 202-207 | http://identifiers.org/oryzabase.gene/2982 | denotes | Tos17 |
| T3 | 467-472 | http://identifiers.org/oryzabase.gene/2982 | denotes | Tos17 |
| T4 | 651-656 | http://identifiers.org/oryzabase.gene/2982 | denotes | Tos17 |
| T5 | 658-664 | http://identifiers.org/oryzabase.gene/6080 | denotes | Osaba1 |
| T6 | 1073-1079 | http://identifiers.org/oryzabase.gene/6080 | denotes | Osaba1 |
| T7 | 1239-1243 | http://identifiers.org/oryzabase.gene/6298 | denotes | TATC |
| T83369 | 658-664 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | Osaba1 |
| T85032 | 1073-1079 | http://identifiers.org/rapdb.locus/Os04g0448900 | denotes | Osaba1 |
| T76503 | 1239-1243 | http://identifiers.org/rapdb.locus/Os01g0501700 | denotes | TATC |
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 725-748 | cand:PECO:0007105-abscisic acid exposure | denotes | low abscisic acid level |
| M_1 | 725-748 | cand:TO:0000615-abscisic acid sensitivity | denotes | low abscisic acid level |
| M_2 | 725-748 | cand:TO:0000166-gibberellic acid sensitivity | denotes | low abscisic acid level |
| M_3 | 725-748 | cand:PECO:0007069-gibberellic acid exposure | denotes | low abscisic acid level |
| M_4 | 725-748 | cand:PECO:0007204-1-naphthaleneacetic acid exposure | denotes | low abscisic acid level |
| M_5 | 725-748 | cand:PECO:0007187-salicylic acid exposure | denotes | low abscisic acid level |
| M_6 | 725-748 | cand:funRiceGene:122-abscisic acid | denotes | low abscisic acid level |
| M_7 | 725-748 | cand:PO:0006501-leaf abscission zone | denotes | low abscisic acid level |
| M_8 | 725-748 | cand:TO:0002667-abscisic acid content | denotes | low abscisic acid level |
| M_9 | 948-968 | cand:WTO:0000370-yellow pigment content of seed | denotes | pale green phenotype |
| M_10 | 948-968 | cand:WTO:0000368-yellow mosaic | denotes | pale green phenotype |
| M_11 | 948-968 | cand:TO:0000292-yellow dwarf disease resistance | denotes | pale green phenotype |
| M_12 | 948-968 | cand:TO:0000885-petiolule color | denotes | pale green phenotype |
| M_13 | 948-968 | cand:TO:0000494-pigment content trait | denotes | pale green phenotype |
| M_14 | 948-968 | cand:TO:0011001-leaf lamina color distribution | denotes | pale green phenotype |
| M_15 | 948-968 | cand:PECO:0007548-Janus green B exposure | denotes | pale green phenotype |
| M_16 | 948-968 | cand:WTO:0000231-hard grain texture | denotes | pale green phenotype |
| M_17 | 948-968 | cand:WTO:0000005-phenotype | denotes | pale green phenotype |
| M_18 | 948-968 | cand:TO:0000106-male sterility type | denotes | pale green phenotype |
| M_19 | 948-968 | cand:TO:0000778-peduncle type | denotes | pale green phenotype |
| M_20 | 658-664 | GeneID:RAPID:Os04g0448900MSUID:LOC_Os04g37619GraID:GR:0101186 | denotes | Osaba1 |
| M_21 | 896-902 | GeneID:NA | denotes | Ostatc |
| T2503 | 172-184 | xzyao:1553 | denotes | Oryza sativa |
| T71853 | 1178-1191 | xzyao:45052 | denotes | plant species |
| T82166 | 576-584 | xzyao:38844 | denotes | the gene |
| T63618 | 704-713 | WTO:0000005 | denotes | phenotype |
| T98731 | 923-932 | WTO:0000005 | denotes | phenotype |
| T23394 | 959-968 | WTO:0000005 | denotes | phenotype |
| T69116 | 1035-1046 | xzyao:8656 | denotes | amino acids |
| T56073 | 729-742 | funRiceGene:339, xzyao:16388 | denotes | abscisic acid |
| T91370 | 992-1005 | funRiceGene:339, xzyao:16388 | denotes | abscisic acid |
| T24183 | 948-958 | xzyao:37609 | denotes | pale green |
| T10207 | 725-748 | xzyao:30207 | denotes | low abscisic acid level |
| T58186 | 799-806 | WTO:0000218, funRiceGene:356 | denotes | drought |
| T39520 | 1018-1025 | WTO:0000218, funRiceGene:356 | denotes | drought |
| T44993 | 111-131 | xzyao:17589 | denotes | zeaxanthin epoxidase |
| T85836 | 1137-1157 | xzyao:17589 | denotes | zeaxanthin epoxidase |
| T28678 | 296-310 | xzyao:27138 | denotes | tissue culture |
| T84367 | 391-405 | xzyao:27138 | denotes | tissue culture |
| T76935 | 973-988 | xzyao:41126 | denotes | slight increase |
| T27759 | 111-121 | hunflair:NA:Chemical | denotes | zeaxanthin |
| T24804 | 865-875 | hunflair:NA:Chemical | denotes | zeaxanthin |
| T6703 | 1137-1147 | hunflair:NA:Chemical | denotes | zeaxanthin |
| T95998 | 149-155 | hunflair:NA:Gene | denotes | ostatc |
| M_22 | 81-86 | hunflair:NA:Gene | denotes | Tos17 |
| M_23 | 202-207 | hunflair:NA:Gene | denotes | Tos17 |
| M_24 | 467-472 | hunflair:NA:Gene | denotes | Tos17 |
| M_25 | 651-656 | hunflair:NA:Gene | denotes | Tos17 |
| M_26 | 1035-1046 | hunflair:NA:Chemical | denotes | amino acids |
| M_27 | 896-902 | hunflair:NA:Gene | denotes | Ostatc |
| M_28 | 1084-1090 | hunflair:NA:Gene | denotes | Ostatc |
| M_29 | 172-184 | hunflair:NA:Species | denotes | Oryza sativa |
| M_30 | 111-131 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_31 | 1137-1157 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_32 | 1201-1210 | hunflair:NA:Species | denotes | bacterial |
| M_33 | 729-742 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_34 | 992-1005 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_35 | 1227-1251 | hunflair:NA:Gene | denotes | translocase TATC protein |
| M_36 | 17-21 | hunflair:NA:Species | denotes | rice |
| M_37 | 166-170 | hunflair:NA:Species | denotes | rice |
| M_38 | 375-379 | hunflair:NA:Species | denotes | rice |
| M_39 | 1318-1322 | hunflair:NA:Species | denotes | rice |
| M_40 | 658-664 | hunflair:NA:Gene | denotes | Osaba1 |
| M_41 | 1073-1079 | hunflair:NA:Gene | denotes | Osaba1 |
| M_42 | 1211-1214 | hunflair:NA:Gene | denotes | Sec |
| M_43 | 1211-1214 | hunflair:NA:Chemical | denotes | Sec |
| M_44 | 111-121 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_45 | 865-875 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_46 | 1137-1147 | pubtator:MESH:D065146:Chemical | denotes | zeaxanthin |
| M_47 | 729-742 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_48 | 992-1005 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_49 | 172-184 | pubtator:4530:Species | denotes | Oryza sativa |
| M_50 | 17-21 | pubtator:4530:Species | denotes | rice |
| M_51 | 166-170 | pubtator:4530:Species | denotes | rice |
| M_52 | 375-379 | pubtator:4530:Species | denotes | rice |
| M_53 | 1318-1322 | pubtator:4530:Species | denotes | rice |
PMID_GLOBAL
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 948-952 | DiseaseOrPhenotypicFeature | denotes | pale | 0015595 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 111-121 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_1 | 865-875 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_2 | 1137-1147 | hunflair:NA:Chemical | denotes | zeaxanthin |
| M_3 | 111-131 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_4 | 1137-1157 | hunflair:NA:Gene | denotes | zeaxanthin epoxidase |
| M_5 | 896-902 | hunflair:NA:Gene | denotes | Ostatc |
| M_6 | 1084-1090 | hunflair:NA:Gene | denotes | Ostatc |
| M_7 | 149-155 | hunflair:NA:Gene | denotes | ostatc |
| M_8 | 172-184 | hunflair:NA:Species | denotes | Oryza sativa |
| M_9 | 1211-1214 | hunflair:NA:Chemical | denotes | Sec |
| M_10 | 1211-1214 | hunflair:NA:Gene | denotes | Sec |
| M_11 | 1201-1210 | hunflair:NA:Species | denotes | bacterial |
| M_12 | 1035-1046 | hunflair:NA:Chemical | denotes | amino acids |
| M_13 | 1227-1251 | hunflair:NA:Gene | denotes | translocase TATC protein |
| M_14 | 729-742 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_15 | 992-1005 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_16 | 17-21 | hunflair:NA:Species | denotes | rice |
| M_17 | 166-170 | hunflair:NA:Species | denotes | rice |
| M_18 | 375-379 | hunflair:NA:Species | denotes | rice |
| M_19 | 1318-1322 | hunflair:NA:Species | denotes | rice |
| M_20 | 81-86 | hunflair:NA:Gene | denotes | Tos17 |
| M_21 | 202-207 | hunflair:NA:Gene | denotes | Tos17 |
| M_22 | 467-472 | hunflair:NA:Gene | denotes | Tos17 |
| M_23 | 651-656 | hunflair:NA:Gene | denotes | Tos17 |
| M_24 | 658-664 | hunflair:NA:Gene | denotes | Osaba1 |
| M_25 | 1073-1079 | hunflair:NA:Gene | denotes | Osaba1 |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 65-80 | gene | denotes | retrotransposon |
| T2 | 186-201 | gene | denotes | retrotransposon |
| T3 | 451-466 | gene | denotes | retrotransposon |
| T4 | 658-664 | gene | denotes | Osaba1 |
| T5 | 896-903 | gene | denotes | Ostatc, |
| T6 | 1073-1079 | gene | denotes | Osaba1 |
| T7 | 1084-1090 | gene | denotes | Ostatc |
| T8 | 1137-1157 | gene | denotes | zeaxanthin epoxidase |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-97 | Sentence | denotes | Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. |
| T2 | 98-161 | Sentence | denotes | Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. |
| T3 | 162-311 | Sentence | denotes | The rice (Oryza sativa) retrotransposon Tos17 is one of a few active retrotransposons in plants and its transposition is activated by tissue culture. |
| T4 | 312-594 | Sentence | denotes | Here, we present the characterization of viviparous mutants of rice induced by tissue culture to demonstrate the feasibility of the use of retrotransposon Tos17 as an endogenous insertional mutagen and cloning of the tagged gene for forward genetics in unraveling the gene function. |
| T5 | 595-657 | Sentence | denotes | Two mutants were shown to be caused by the insertion of Tos17. |
| T6 | 658-807 | Sentence | denotes | Osaba1, a strong viviparous mutant with wilty phenotype, displayed low abscisic acid level and almost no further increase in its levels upon drought. |
| T7 | 808-876 | Sentence | denotes | The mutant is shown to be impaired in the epoxidation of zeaxanthin. |
| T8 | 877-1026 | Sentence | denotes | On the other hand, Ostatc, a mutant with weak phenotype, exhibited the pale green phenotype and slight increase in abscisic acid levels upon drought. |
| T9 | 1027-1266 | Sentence | denotes | Deduced amino acids of the causative genes of Osaba1 and Ostatc manifested a significantly high homology with zeaxanthin epoxidase isolated from other plant species and with bacterial Sec-independent translocase TATC protein, respectively. |
| T10 | 1267-1323 | Sentence | denotes | This is the first example of transposon tagging in rice. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-97 | Sentence | denotes | Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. |
| T2 | 98-161 | Sentence | denotes | Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. |
| T3 | 162-311 | Sentence | denotes | The rice (Oryza sativa) retrotransposon Tos17 is one of a few active retrotransposons in plants and its transposition is activated by tissue culture. |
| T4 | 312-594 | Sentence | denotes | Here, we present the characterization of viviparous mutants of rice induced by tissue culture to demonstrate the feasibility of the use of retrotransposon Tos17 as an endogenous insertional mutagen and cloning of the tagged gene for forward genetics in unraveling the gene function. |
| T5 | 595-657 | Sentence | denotes | Two mutants were shown to be caused by the insertion of Tos17. |
| T6 | 658-807 | Sentence | denotes | Osaba1, a strong viviparous mutant with wilty phenotype, displayed low abscisic acid level and almost no further increase in its levels upon drought. |
| T7 | 808-876 | Sentence | denotes | The mutant is shown to be impaired in the epoxidation of zeaxanthin. |
| T8 | 877-1026 | Sentence | denotes | On the other hand, Ostatc, a mutant with weak phenotype, exhibited the pale green phenotype and slight increase in abscisic acid levels upon drought. |
| T9 | 1027-1266 | Sentence | denotes | Deduced amino acids of the causative genes of Osaba1 and Ostatc manifested a significantly high homology with zeaxanthin epoxidase isolated from other plant species and with bacterial Sec-independent translocase TATC protein, respectively. |
| T10 | 1267-1323 | Sentence | denotes | This is the first example of transposon tagging in rice. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-97 | Sentence | denotes | Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. |
| T2 | 98-161 | Sentence | denotes | Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. |
| T3 | 162-311 | Sentence | denotes | The rice (Oryza sativa) retrotransposon Tos17 is one of a few active retrotransposons in plants and its transposition is activated by tissue culture. |
| T4 | 312-594 | Sentence | denotes | Here, we present the characterization of viviparous mutants of rice induced by tissue culture to demonstrate the feasibility of the use of retrotransposon Tos17 as an endogenous insertional mutagen and cloning of the tagged gene for forward genetics in unraveling the gene function. |
| T5 | 595-657 | Sentence | denotes | Two mutants were shown to be caused by the insertion of Tos17. |
| T6 | 658-807 | Sentence | denotes | Osaba1, a strong viviparous mutant with wilty phenotype, displayed low abscisic acid level and almost no further increase in its levels upon drought. |
| T7 | 808-876 | Sentence | denotes | The mutant is shown to be impaired in the epoxidation of zeaxanthin. |
| T8 | 877-1026 | Sentence | denotes | On the other hand, Ostatc, a mutant with weak phenotype, exhibited the pale green phenotype and slight increase in abscisic acid levels upon drought. |
| T9 | 1027-1266 | Sentence | denotes | Deduced amino acids of the causative genes of Osaba1 and Ostatc manifested a significantly high homology with zeaxanthin epoxidase isolated from other plant species and with bacterial Sec-independent translocase TATC protein, respectively. |
| T10 | 1267-1323 | Sentence | denotes | This is the first example of transposon tagging in rice. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-97 | Sentence | denotes | Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. |
| T2 | 98-161 | Sentence | denotes | Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene. |
| T3 | 162-311 | Sentence | denotes | The rice (Oryza sativa) retrotransposon Tos17 is one of a few active retrotransposons in plants and its transposition is activated by tissue culture. |
| T4 | 312-594 | Sentence | denotes | Here, we present the characterization of viviparous mutants of rice induced by tissue culture to demonstrate the feasibility of the use of retrotransposon Tos17 as an endogenous insertional mutagen and cloning of the tagged gene for forward genetics in unraveling the gene function. |
| T5 | 595-657 | Sentence | denotes | Two mutants were shown to be caused by the insertion of Tos17. |
| T6 | 658-807 | Sentence | denotes | Osaba1, a strong viviparous mutant with wilty phenotype, displayed low abscisic acid level and almost no further increase in its levels upon drought. |
| T7 | 808-876 | Sentence | denotes | The mutant is shown to be impaired in the epoxidation of zeaxanthin. |
| T8 | 877-1026 | Sentence | denotes | On the other hand, Ostatc, a mutant with weak phenotype, exhibited the pale green phenotype and slight increase in abscisic acid levels upon drought. |
| T9 | 1027-1266 | Sentence | denotes | Deduced amino acids of the causative genes of Osaba1 and Ostatc manifested a significantly high homology with zeaxanthin epoxidase isolated from other plant species and with bacterial Sec-independent translocase TATC protein, respectively. |
| T10 | 1267-1323 | Sentence | denotes | This is the first example of transposon tagging in rice. |