PubMed:11133985 / 1349-1606
Annnotations
Oryza-OGER
{"project":"Oryza-OGER","denotations":[{"id":"T196","span":{"begin":16,"end":24},"obj":"http://purl.obolibrary.org/obo/SO_0000167"},{"id":"T197","span":{"begin":25,"end":28},"obj":"http://purl.obolibrary.org/obo/PR_000017371"},{"id":"T198","span":{"begin":25,"end":28},"obj":"http://purl.obolibrary.org/obo/PR_P42768"},{"id":"T199","span":{"begin":25,"end":28},"obj":"http://purl.obolibrary.org/obo/PR_P70315"},{"id":"T200","span":{"begin":25,"end":28},"obj":"http://id.nlm.nih.gov/mesh/D014923"},{"id":"T201","span":{"begin":60,"end":64},"obj":"http://purl.obolibrary.org/obo/PR_000022207"},{"id":"T202","span":{"begin":60,"end":64},"obj":"http://purl.obolibrary.org/obo/PR_P17444"},{"id":"T203","span":{"begin":60,"end":64},"obj":"http://purl.obolibrary.org/obo/CHEBI_30225"},{"id":"T204","span":{"begin":60,"end":64},"obj":"http://purl.obolibrary.org/obo/CHEBI_10545"},{"id":"T205","span":{"begin":60,"end":64},"obj":"http://web.expasy.org/cellosaurus/CVCL_R799"},{"id":"T206","span":{"begin":60,"end":64},"obj":"http://purl.obolibrary.org/obo/PR_Q2FV11"},{"id":"T207","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/P08236"},{"id":"T208","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/O18835"},{"id":"T209","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/O77695"},{"id":"T210","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/T2KN75"},{"id":"T211","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/P12265"},{"id":"T212","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/Q4FAT7"},{"id":"T213","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/P05804"},{"id":"T214","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/O97524"},{"id":"T215","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/Q7SFB0"},{"id":"T216","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/P06760"},{"id":"T217","span":{"begin":60,"end":78},"obj":"http://id.nlm.nih.gov/mesh/D005966"},{"id":"T218","span":{"begin":60,"end":78},"obj":"http://purl.obolibrary.org/obo/PR_000008358"},{"id":"T219","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/Q5R5N6"},{"id":"T220","span":{"begin":60,"end":78},"obj":"http://www.uniprot.org/uniprot/A2QEQ6"},{"id":"T221","span":{"begin":65,"end":78},"obj":"http://id.nlm.nih.gov/mesh/D005966"},{"id":"T222","span":{"begin":88,"end":92},"obj":"http://purl.obolibrary.org/obo/SO_0000704"},{"id":"T223","span":{"begin":93,"end":96},"obj":"http://purl.obolibrary.org/obo/PR_P49258"},{"id":"T224","span":{"begin":93,"end":96},"obj":"http://www.ncbi.nlm.nih.gov/taxonomy/1481724"},{"id":"T225","span":{"begin":110,"end":114},"obj":"http://purl.obolibrary.org/obo/SO_0000704"},{"id":"T226","span":{"begin":115,"end":118},"obj":"http://purl.obolibrary.org/obo/PR_000017371"},{"id":"T227","span":{"begin":115,"end":118},"obj":"http://purl.obolibrary.org/obo/PR_P42768"},{"id":"T228","span":{"begin":115,"end":118},"obj":"http://purl.obolibrary.org/obo/PR_P70315"},{"id":"T229","span":{"begin":115,"end":118},"obj":"http://id.nlm.nih.gov/mesh/D014923"},{"id":"T230","span":{"begin":135,"end":139},"obj":"http://id.nlm.nih.gov/mesh/D012275"},{"id":"T231","span":{"begin":135,"end":139},"obj":"http://purl.bioontology.org/ontology/RXNORM/1311040"},{"id":"T232","span":{"begin":135,"end":139},"obj":"http://www.ncbi.nlm.nih.gov/taxonomy/4530"},{"id":"T233","span":{"begin":145,"end":149},"obj":"http://purl.obolibrary.org/obo/PR_000022207"},{"id":"T234","span":{"begin":145,"end":149},"obj":"http://purl.obolibrary.org/obo/PR_P17444"},{"id":"T235","span":{"begin":145,"end":149},"obj":"http://purl.obolibrary.org/obo/CHEBI_30225"},{"id":"T236","span":{"begin":145,"end":149},"obj":"http://purl.obolibrary.org/obo/CHEBI_10545"},{"id":"T237","span":{"begin":145,"end":149},"obj":"http://web.expasy.org/cellosaurus/CVCL_R799"},{"id":"T238","span":{"begin":145,"end":149},"obj":"http://purl.obolibrary.org/obo/PR_Q2FV11"},{"id":"T239","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/P08236"},{"id":"T240","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/O18835"},{"id":"T241","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/O77695"},{"id":"T242","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/T2KN75"},{"id":"T243","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/P12265"},{"id":"T244","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/Q4FAT7"},{"id":"T245","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/P05804"},{"id":"T246","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/O97524"},{"id":"T247","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/Q7SFB0"},{"id":"T248","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/P06760"},{"id":"T249","span":{"begin":145,"end":163},"obj":"http://id.nlm.nih.gov/mesh/D005966"},{"id":"T250","span":{"begin":145,"end":163},"obj":"http://purl.obolibrary.org/obo/PR_000008358"},{"id":"T251","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/Q5R5N6"},{"id":"T252","span":{"begin":145,"end":163},"obj":"http://www.uniprot.org/uniprot/A2QEQ6"},{"id":"T253","span":{"begin":150,"end":163},"obj":"http://id.nlm.nih.gov/mesh/D005966"},{"id":"T254","span":{"begin":164,"end":168},"obj":"http://purl.obolibrary.org/obo/SO_0000704"},{"id":"T255","span":{"begin":198,"end":206},"obj":"http://id.nlm.nih.gov/mesh/C000624173"},{"id":"T256","span":{"begin":207,"end":210},"obj":"http://purl.obolibrary.org/obo/PR_P49258"},{"id":"T257","span":{"begin":207,"end":210},"obj":"http://www.ncbi.nlm.nih.gov/taxonomy/1481724"},{"id":"T258","span":{"begin":223,"end":228},"obj":"http://purl.obolibrary.org/obo/UBERON_0022303"},{"id":"T259","span":{"begin":223,"end":228},"obj":"http://purl.obolibrary.org/obo/UBERON_0000119"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
pqqtest_sentence
{"project":"pqqtest_sentence","denotations":[{"id":"T9916","span":{"begin":236,"end":256},"obj":"xzyao:27494"},{"id":"T2468","span":{"begin":211,"end":228},"obj":"xzyao:34119"},{"id":"M_23","span":{"begin":247,"end":256},"obj":"PO:0009089, funRiceGene:253"},{"id":"M_42","span":{"begin":9,"end":15},"obj":"hunflair:NA:Gene"},{"id":"M_48","span":{"begin":60,"end":78},"obj":"hunflair:NA:Gene"},{"id":"M_49","span":{"begin":145,"end":163},"obj":"hunflair:NA:Gene"},{"id":"M_53","span":{"begin":135,"end":139},"obj":"hunflair:NA:Species"},{"id":"M_63","span":{"begin":135,"end":139},"obj":"pubtator:4530:Species"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
21k_plant_trait_mention
{"project":"21k_plant_trait_mention","denotations":[{"id":"M_16","span":{"begin":9,"end":15},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":135,"end":139},"obj":"hunflair:NA:Species"},{"id":"M_22","span":{"begin":60,"end":78},"obj":"hunflair:NA:Gene"},{"id":"M_23","span":{"begin":145,"end":163},"obj":"hunflair:NA:Gene"},{"id":"M_45","span":{"begin":135,"end":139},"obj":"pubtator:4530:Species"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
OryzaGP_2021
{"project":"OryzaGP_2021","denotations":[{"id":"T6","span":{"begin":9,"end":15},"obj":"http://identifiers.org/oryzabase.gene/7467"},{"id":"T87069","span":{"begin":9,"end":15},"obj":"http://identifiers.org/ricegap/LOC_Os07g08420"},{"id":"T10758","span":{"begin":9,"end":15},"obj":"http://identifiers.org/rapdb.locus/Os07g0182000"},{"id":"T66961","span":{"begin":9,"end":15},"obj":"http://identifiers.org/uniprot/Q9AR01"},{"id":"M_0","span":{"begin":60,"end":78},"obj":"hunflair:NA:Gene"},{"id":"M_1","span":{"begin":145,"end":163},"obj":"hunflair:NA:Gene"},{"id":"M_12","span":{"begin":135,"end":139},"obj":"hunflair:NA:Species"},{"id":"M_18","span":{"begin":9,"end":15},"obj":"hunflair:NA:Gene"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
sentences
{"project":"sentences","denotations":[{"id":"T10","span":{"begin":0,"end":257},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
Glycosmos6-MAT
{"project":"Glycosmos6-MAT","denotations":[{"id":"T3","span":{"begin":247,"end":256},"obj":"http://purl.obolibrary.org/obo/MAT_0000227"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
OryzaGP_2021_v2
{"project":"OryzaGP_2021_v2","denotations":[{"id":"T6","span":{"begin":9,"end":15},"obj":"http://identifiers.org/oryzabase.gene/7467"},{"id":"T51281","span":{"begin":9,"end":15},"obj":"http://identifiers.org/rapdb.locus/Os07g0182000"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
OryzaGP_2021_FLAIR
{"project":"OryzaGP_2021_FLAIR","denotations":[{"id":"M_0","span":{"begin":60,"end":78},"obj":"hunflair:NA:Gene"},{"id":"M_1","span":{"begin":145,"end":163},"obj":"hunflair:NA:Gene"},{"id":"M_12","span":{"begin":135,"end":139},"obj":"hunflair:NA:Species"},{"id":"M_18","span":{"begin":9,"end":15},"obj":"hunflair:NA:Gene"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
OryzaGP
{"project":"OryzaGP","denotations":[{"id":"T4","span":{"begin":9,"end":15},"obj":"gene"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
NCBITAXON
{"project":"NCBITAXON","denotations":[{"id":"T4","span":{"begin":135,"end":139},"obj":"OrganismTaxon"}],"attributes":[{"id":"A4","pred":"db_id","subj":"T4","obj":"4530"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
Anatomy-UBERON
{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":223,"end":228},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0000119"},{"id":"A2","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0022303"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}
Anatomy-MAT
{"project":"Anatomy-MAT","denotations":[{"id":"T3","span":{"begin":247,"end":256},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"mat_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MAT_0000227"}],"text":"When the RISBZ1 promoter was transcriptionally fused to the beta-glucuronidase reporter gene and the chimeric gene was introduced into rice, the beta-glucuronidase gene is specifically expressed in aleurone and subaleurone layer of the developing endosperm."}