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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 97-105 https://glytoucan.org/Structures/Glycans/G00057MO denotes lacdiNAc
T2 97-105 https://glytoucan.org/Structures/Glycans/G31736BK denotes lacdiNAc
T3 469-476 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 97-105 Glycan_Motif denotes lacdiNAc https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G31736BK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00057MO
T3 469-476 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-117 Sentence denotes Phosphorylcholine-containing N-glycans of Trichinella spiralis: identification of multiantennary lacdiNAc structures.
TextSentencer_T2 118-274 Sentence denotes Although the presence of phosphorylcholine (PC) in Trichinella spiralis is well established, the precise structure of the PC-bearing molecules is not known.
TextSentencer_T3 275-411 Sentence denotes In this paper, we report structural studies of N-glycans released from T.spiralis affinity-purified antigens by peptide N-glycosidase F.
TextSentencer_T4 412-728 Sentence denotes Three classes of N-glycan structures were observed: high mannose type structures; those which had been fully trimmed to the trimannosyl core and were sub-stoichiometrically fucosylated; and those with a trimannosyl core, with and without core fucosylation, carrying between one and eight N-acetylhexosamine residues.
TextSentencer_T5 729-848 Sentence denotes Of the three classes of glycans, only the last was found to be substituted with detectable levels of phosphorylcholine.
T1 0-117 Sentence denotes Phosphorylcholine-containing N-glycans of Trichinella spiralis: identification of multiantennary lacdiNAc structures.
T2 118-274 Sentence denotes Although the presence of phosphorylcholine (PC) in Trichinella spiralis is well established, the precise structure of the PC-bearing molecules is not known.
T3 275-728 Sentence denotes In this paper, we report structural studies of N-glycans released from T.spiralis affinity-purified antigens by peptide N-glycosidase F. Three classes of N-glycan structures were observed: high mannose type structures; those which had been fully trimmed to the trimannosyl core and were sub-stoichiometrically fucosylated; and those with a trimannosyl core, with and without core fucosylation, carrying between one and eight N-acetylhexosamine residues.
T4 729-848 Sentence denotes Of the three classes of glycans, only the last was found to be substituted with detectable levels of phosphorylcholine.
T1 0-117 Sentence denotes Phosphorylcholine-containing N-glycans of Trichinella spiralis: identification of multiantennary lacdiNAc structures.
T2 118-274 Sentence denotes Although the presence of phosphorylcholine (PC) in Trichinella spiralis is well established, the precise structure of the PC-bearing molecules is not known.
T3 275-411 Sentence denotes In this paper, we report structural studies of N-glycans released from T.spiralis affinity-purified antigens by peptide N-glycosidase F.
T4 412-728 Sentence denotes Three classes of N-glycan structures were observed: high mannose type structures; those which had been fully trimmed to the trimannosyl core and were sub-stoichiometrically fucosylated; and those with a trimannosyl core, with and without core fucosylation, carrying between one and eight N-acetylhexosamine residues.
T5 729-848 Sentence denotes Of the three classes of glycans, only the last was found to be substituted with detectable levels of phosphorylcholine.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 97-105 https://glytoucan.org/Structures/Glycans/G00057MO denotes lacdiNAc
T2 97-105 https://glytoucan.org/Structures/Glycans/G31736BK denotes lacdiNAc
T3 469-476 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 0-17 FMAID:199788 denotes Phosphorylcholine
_T2 0-17 FMAID:85434 denotes Phosphorylcholine
_T3 143-160 FMAID:199788 denotes phosphorylcholine
_T4 143-160 FMAID:85434 denotes phosphorylcholine
_T5 469-476 FMAID:82801 denotes mannose
_T6 469-476 FMAID:196796 denotes mannose
_T7 830-847 FMAID:199788 denotes phosphorylcholine
_T8 830-847 FMAID:85434 denotes phosphorylcholine

uniprot-human

Id Subject Object Predicate Lexical cue
T1 162-164 http://www.uniprot.org/uniprot/P11498 denotes PC
T2 240-242 http://www.uniprot.org/uniprot/P11498 denotes PC
T3 162-164 http://www.uniprot.org/uniprot/O00592 denotes PC
T4 240-242 http://www.uniprot.org/uniprot/O00592 denotes PC

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 162-164 http://www.uniprot.org/uniprot/Q9R0M4 denotes PC
T2 240-242 http://www.uniprot.org/uniprot/Q9R0M4 denotes PC

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 42-53 http://purl.bioontology.org/ontology/NCBITAXON/6333 denotes Trichinella
T2 42-53 http://purl.bioontology.org/ontology/NCBITAXON/6332 denotes Trichinella
T3 42-53 http://purl.bioontology.org/ontology/NCBITAXON/197903 denotes Trichinella
T4 42-62 http://purl.bioontology.org/ontology/NCBITAXON/6337 denotes Trichinella spiralis
T5 42-62 http://purl.bioontology.org/ontology/NCBITAXON/6334 denotes Trichinella spiralis
T6 169-180 http://purl.bioontology.org/ontology/NCBITAXON/6332 denotes Trichinella
T7 169-180 http://purl.bioontology.org/ontology/NCBITAXON/6333 denotes Trichinella
T8 169-180 http://purl.bioontology.org/ontology/NCBITAXON/197903 denotes Trichinella
T9 169-189 http://purl.bioontology.org/ontology/NCBITAXON/6337 denotes Trichinella spiralis
T10 169-189 http://purl.bioontology.org/ontology/NCBITAXON/6334 denotes Trichinella spiralis

GO-BP

Id Subject Object Predicate Lexical cue
T1 585-596 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T2 655-667 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation

GO-CC

Id Subject Object Predicate Lexical cue
T1 548-552 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T2 627-631 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T3 650-654 http://purl.obolibrary.org/obo/GO_0019013 denotes core

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 251-260 http://edamontology.org/topic_2839 denotes molecules
T2 311-318 http://edamontology.org/topic_3678 denotes studies
T3 375-383 http://edamontology.org/topic_2830 denotes antigens
T4 387-394 http://edamontology.org/topic_0154 denotes peptide

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 106-116 http://edamontology.org/data_0883 denotes structures
T2 223-232 http://edamontology.org/data_0883 denotes structure
T3 293-299 http://edamontology.org/data_2048 denotes report
T4 300-310 http://edamontology.org/data_0883 denotes structural
T5 387-394 http://edamontology.org/data_2906 denotes peptide
T6 438-448 http://edamontology.org/data_0883 denotes structures
T7 482-492 http://edamontology.org/data_0883 denotes structures
T8 521-528 http://edamontology.org/operation_3192 denotes trimmed
T9 719-727 http://edamontology.org/data_1756 denotes residues
T10 809-819 http://edamontology.org/operation_2423 denotes detectable

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 29-38 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 322-331 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T3 429-437 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan
T4 97-105 http://rdf.glycoinfo.org/glycan/G00057MO denotes lacdiNAc
T5 464-476 http://rdf.glycoinfo.org/glycan/G00028MO denotes high mannose

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 42-62 OrganismTaxon denotes Trichinella spiralis 6334
T2 169-189 OrganismTaxon denotes Trichinella spiralis 6334