PubMed:10929002
Annnotations
Glycan-Motif
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1282-1289 | https://glytoucan.org/Structures/Glycans/G00048MO | denotes | Lewis b |
T2 | 1282-1289 | https://glytoucan.org/Structures/Glycans/G39211DH | denotes | Lewis b |
GlyCosmos6-Glycan-Motif-Image
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 1282-1289 | Glycan_Motif | denotes | Lewis b | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G39211DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00048MO |
Glycosmos6-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1282-1289 | http://www.glycoepitope.jp/epitopes/EP0010 | denotes | Lewis b |
Glycosmos6-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 18-27 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colonizer |
T2 | 285-292 | http://purl.obolibrary.org/obo/MAT_0000051 | denotes | stomach |
T3 | 309-318 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colonizes |
T4 | 1703-1715 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | Colonization |
T5 | 1751-1758 | http://purl.obolibrary.org/obo/MAT_0000051 | denotes | stomach |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
TextSentencer_T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
TextSentencer_T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
TextSentencer_T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
TextSentencer_T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
TextSentencer_T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
TextSentencer_T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
TextSentencer_T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
TextSentencer_T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
TextSentencer_T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
TextSentencer_T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
TextSentencer_T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
TextSentencer_T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
TextSentencer_T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
TextSentencer_T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
TextSentencer_T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
GlyCosmos6-Glycan-Motif-Structure
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1282-1289 | https://glytoucan.org/Structures/Glycans/G00048MO | denotes | Lewis b |
T2 | 1282-1289 | https://glytoucan.org/Structures/Glycans/G39211DH | denotes | Lewis b |
Inflammaging
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
PubmedHPO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 474-499 | HP_0002592 | denotes | gastric or duodenal ulcer |
T2 | 485-499 | HP_0002588 | denotes | duodenal ulcer |
T3 | 514-523 | HP_0005263 | denotes | gastritis |
T4 | 552-566 | HP_0012126 | denotes | gastric cancer |
T5 | 560-566 | HP_0002664 | denotes | cancer |
GlycoBiology-PACDB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
_T1 | 28-47 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC049,LEC063,LEC070,LEC078,LEC107,LEC336,LEC343,LEC409,LEC419,LEC446,LEC582 | denotes | Helicobacter pylori |
_T2 | 28-47 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC444 | denotes | Helicobacter pylori |
_T3 | 28-47 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC362 | denotes | Helicobacter pylori |
_T4 | 28-47 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC121 | denotes | Helicobacter pylori |
_T5 | 121-140 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC362 | denotes | Helicobacter pylori |
_T6 | 121-140 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC121 | denotes | Helicobacter pylori |
_T7 | 121-140 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC049,LEC063,LEC070,LEC078,LEC107,LEC336,LEC343,LEC409,LEC419,LEC446,LEC582 | denotes | Helicobacter pylori |
_T8 | 121-140 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC444 | denotes | Helicobacter pylori |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 431-445 | http://purl.bioontology.org/ontology/ICD10/K29.9 | denotes | gastroduodenal |
T2 | 485-493 | http://purl.bioontology.org/ontology/ICD10/K29.8 | denotes | duodenal |
T3 | 485-499 | http://purl.bioontology.org/ontology/ICD10/K26 | denotes | duodenal ulcer |
T4 | 514-523 | http://purl.bioontology.org/ontology/ICD10/K29.7 | denotes | gastritis |
GlycoBiology-FMA
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
_T1 | 10-17 | FMAID:167337 | denotes | gastric |
_T2 | 18-27 | FMAID:104231 | denotes | colonizer |
_T3 | 18-27 | FMAID:14543 | denotes | colonizer |
_T4 | 285-292 | FMAID:93576 | denotes | stomach |
_T5 | 285-292 | FMAID:7148 | denotes | stomach |
_T6 | 309-318 | FMAID:14543 | denotes | colonizes |
_T7 | 309-318 | FMAID:104231 | denotes | colonizes |
_T8 | 474-481 | FMAID:167337 | denotes | gastric |
_T9 | 552-559 | FMAID:167337 | denotes | gastric |
_T10 | 739-745 | FMAID:198062 | denotes | genome |
_T11 | 739-745 | FMAID:84116 | denotes | genome |
_T12 | 859-864 | FMAID:68646 | denotes | cells |
_T13 | 859-864 | FMAID:169002 | denotes | cells |
_T14 | 932-939 | FMAID:50594 | denotes | surface |
_T15 | 932-939 | FMAID:146300 | denotes | surface |
_T16 | 940-959 | FMAID:196779 | denotes | lipopolysaccharides |
_T17 | 940-959 | FMAID:196735 | denotes | lipopolysaccharides |
_T18 | 940-959 | FMAID:82785 | denotes | lipopolysaccharides |
_T19 | 940-959 | FMAID:82746 | denotes | lipopolysaccharides |
_T20 | 1079-1096 | FMAID:89997 | denotes | membrane proteins |
_T21 | 1079-1096 | FMAID:198528 | denotes | membrane proteins |
_T22 | 1079-1105 | FMAID:85554 | denotes | membrane proteins probably |
_T23 | 1079-1105 | FMAID:199979 | denotes | membrane proteins probably |
_T24 | 1088-1096 | FMAID:165447 | denotes | proteins |
_T25 | 1088-1096 | FMAID:67257 | denotes | proteins |
_T26 | 1191-1203 | FMAID:197276 | denotes | carbohydrate |
_T27 | 1191-1203 | FMAID:82737 | denotes | carbohydrate |
_T28 | 1251-1258 | FMAID:146300 | denotes | surface |
_T29 | 1251-1258 | FMAID:50594 | denotes | surface |
_T30 | 1259-1267 | FMAID:67257 | denotes | proteins |
_T31 | 1259-1267 | FMAID:165447 | denotes | proteins |
_T32 | 1410-1416 | FMAID:261267 | denotes | mucosa |
_T33 | 1410-1416 | FMAID:85355 | denotes | mucosa |
_T34 | 1703-1715 | FMAID:104231 | denotes | Colonization |
_T35 | 1703-1715 | FMAID:14543 | denotes | Colonization |
_T36 | 1751-1758 | FMAID:7148 | denotes | stomach |
_T37 | 1751-1758 | FMAID:93576 | denotes | stomach |
GlycoBiology-NCBITAXON
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 28-40 | http://purl.bioontology.org/ontology/NCBITAXON/209 | denotes | Helicobacter |
T2 | 70-78 | http://purl.bioontology.org/ontology/NCBITAXON/600794 | denotes | parasite |
T3 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/1368069 | denotes | bacterium |
T4 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538104 | denotes | bacterium |
T5 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538107 | denotes | bacterium |
T6 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538101 | denotes | bacterium |
T7 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538108 | denotes | bacterium |
T8 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538099 | denotes | bacterium |
T9 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538113 | denotes | bacterium |
T10 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538097 | denotes | bacterium |
T11 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538117 | denotes | bacterium |
T12 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/336400 | denotes | bacterium |
T13 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538091 | denotes | bacterium |
T14 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538085 | denotes | bacterium |
T15 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538084 | denotes | bacterium |
T16 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538076 | denotes | bacterium |
T17 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538075 | denotes | bacterium |
T18 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/1730 | denotes | bacterium |
T19 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/400048 | denotes | bacterium |
T20 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/674166 | denotes | bacterium |
T21 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/336405 | denotes | bacterium |
T22 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/1144558 | denotes | bacterium |
T23 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/336404 | denotes | bacterium |
T24 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/336403 | denotes | bacterium |
T25 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/138290 | denotes | bacterium |
T26 | 111-120 | http://purl.bioontology.org/ontology/NCBITAXON/538072 | denotes | bacterium |
T27 | 111-133 | http://purl.bioontology.org/ontology/NCBITAXON/1054170 | denotes | bacterium Helicobacter |
T28 | 121-133 | http://purl.bioontology.org/ontology/NCBITAXON/209 | denotes | Helicobacter |
T29 | 560-566 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
T30 | 611-615 | http://purl.bioontology.org/ontology/NCBITAXON/9605 | denotes | homo |
T31 | 611-623 | http://purl.bioontology.org/ontology/NCBITAXON/9606 | denotes | homo sapiens |
T32 | 859-864 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
T33 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538107 | denotes | bacterium |
T34 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538084 | denotes | bacterium |
T35 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538085 | denotes | bacterium |
T36 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538091 | denotes | bacterium |
T37 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538097 | denotes | bacterium |
T38 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538099 | denotes | bacterium |
T39 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538101 | denotes | bacterium |
T40 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538104 | denotes | bacterium |
T41 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/1368069 | denotes | bacterium |
T42 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538076 | denotes | bacterium |
T43 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538108 | denotes | bacterium |
T44 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538113 | denotes | bacterium |
T45 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/1730 | denotes | bacterium |
T46 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538075 | denotes | bacterium |
T47 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538072 | denotes | bacterium |
T48 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/400048 | denotes | bacterium |
T49 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/674166 | denotes | bacterium |
T50 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/336405 | denotes | bacterium |
T51 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/1144558 | denotes | bacterium |
T52 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/336404 | denotes | bacterium |
T53 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/336403 | denotes | bacterium |
T54 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/538117 | denotes | bacterium |
T55 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/138290 | denotes | bacterium |
T56 | 1533-1542 | http://purl.bioontology.org/ontology/NCBITAXON/336400 | denotes | bacterium |
T57 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1468265 | denotes | bacterium actively |
T58 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166659 | denotes | bacterium actively |
T59 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1436245 | denotes | bacterium actively |
T60 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166658 | denotes | bacterium actively |
T61 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1436243 | denotes | bacterium actively |
T62 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/700064 | denotes | bacterium actively |
T63 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/261174 | denotes | bacterium actively |
T64 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1076610 | denotes | bacterium actively |
T65 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166657 | denotes | bacterium actively |
T66 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/700066 | denotes | bacterium actively |
T67 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166656 | denotes | bacterium actively |
T68 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/31975 | denotes | bacterium actively |
T69 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166648 | denotes | bacterium actively |
T70 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/159443 | denotes | bacterium actively |
T71 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/160663 | denotes | bacterium actively |
T72 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1054153 | denotes | bacterium actively |
T73 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166655 | denotes | bacterium actively |
T74 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1201234 | denotes | bacterium actively |
T75 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/493873 | denotes | bacterium actively |
T76 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/493872 | denotes | bacterium actively |
T77 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/913254 | denotes | bacterium actively |
T78 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1055837 | denotes | bacterium actively |
T79 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166654 | denotes | bacterium actively |
T80 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/39138 | denotes | bacterium actively |
T81 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1468266 | denotes | bacterium actively |
T82 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/700065 | denotes | bacterium actively |
T83 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1468264 | denotes | bacterium actively |
T84 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1055836 | denotes | bacterium actively |
T85 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1471284 | denotes | bacterium actively |
T86 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/913264 | denotes | bacterium actively |
T87 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/410689 | denotes | bacterium actively |
T88 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166653 | denotes | bacterium actively |
T89 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/913263 | denotes | bacterium actively |
T90 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/198277 | denotes | bacterium actively |
T91 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166652 | denotes | bacterium actively |
T92 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/1342843 | denotes | bacterium actively |
T93 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166666 | denotes | bacterium actively |
T94 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166650 | denotes | bacterium actively |
T95 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166665 | denotes | bacterium actively |
T96 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166664 | denotes | bacterium actively |
T97 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166663 | denotes | bacterium actively |
T98 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166662 | denotes | bacterium actively |
T99 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166661 | denotes | bacterium actively |
T100 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166649 | denotes | bacterium actively |
T101 | 1533-1551 | http://purl.bioontology.org/ontology/NCBITAXON/166660 | denotes | bacterium actively |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 70-78 | http://purl.obolibrary.org/obo/GO_0072519 | denotes | parasite |
T2 | 388-393 | http://purl.obolibrary.org/obo/GO_0051179 | denotes | local |
T3 | 394-406 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
T4 | 454-462 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | develops |
T5 | 1902-1911 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | developed |
T6 | 820-833 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
T7 | 1417-1430 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
T8 | 1350-1368 | http://purl.obolibrary.org/obo/GO_0051099 | denotes | binding activities |
T9 | 1572-1593 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammatory response |
T10 | 1813-1823 | http://purl.obolibrary.org/obo/GO_0030433 | denotes | eradicates |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1191-1211 | http://purl.obolibrary.org/obo/GO_0030246 | denotes | carbohydrate-binding |
T2 | 1204-1211 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
T3 | 1290-1297 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
T4 | 1350-1357 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
T5 | 1204-1211 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
T6 | 1290-1297 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
T7 | 1350-1357 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
T8 | 1204-1211 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
T9 | 1290-1297 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
T10 | 1350-1357 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
T11 | 1204-1211 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T12 | 1290-1297 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T13 | 1350-1357 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 65-69 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T2 | 854-858 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T3 | 995-999 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T4 | 1154-1158 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T5 | 1405-1409 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T6 | 1523-1527 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T7 | 1567-1571 | http://purl.obolibrary.org/obo/GO_0018995 | denotes | host |
T8 | 854-864 | http://purl.obolibrary.org/obo/GO_0043657 | denotes | host cells |
T9 | 859-864 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T10 | 1073-1087 | http://purl.obolibrary.org/obo/GO_0019867 | denotes | outer membrane |
T11 | 1079-1087 | http://purl.obolibrary.org/obo/GO_0016020 | denotes | membrane |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 18-27 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colonizer |
T2 | 309-318 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colonizes |
T3 | 285-292 | http://purl.obolibrary.org/obo/UBERON_0000945 | denotes | stomach |
T4 | 1751-1758 | http://purl.obolibrary.org/obo/UBERON_0000945 | denotes | stomach |
T5 | 1410-1416 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
EDAM-topics
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 4-9 | http://edamontology.org/topic_2815 | denotes | human |
T2 | 233-239 | http://edamontology.org/topic_0003 | denotes | topics |
T3 | 279-284 | http://edamontology.org/topic_2815 | denotes | human |
T4 | 446-453 | http://edamontology.org/topic_0634 | denotes | disease |
T5 | 560-566 | http://edamontology.org/topic_2640 | denotes | cancer |
T6 | 570-578 | http://edamontology.org/topic_2269 | denotes | probable |
T7 | 739-745 | http://edamontology.org/topic_0622 | denotes | genome |
T8 | 746-755 | http://edamontology.org/topic_0080 | denotes | sequences |
T9 | 746-755 | http://edamontology.org/topic_3168 | denotes | sequences |
T10 | 1079-1096 | http://edamontology.org/topic_0820 | denotes | membrane proteins |
T11 | 1088-1096 | http://edamontology.org/topic_0078 | denotes | proteins |
T12 | 1097-1105 | http://edamontology.org/topic_2269 | denotes | probably |
T13 | 1191-1203 | http://edamontology.org/topic_0152 | denotes | carbohydrate |
T14 | 1259-1267 | http://edamontology.org/topic_0078 | denotes | proteins |
T15 | 1774-1782 | http://edamontology.org/topic_0634 | denotes | diseases |
T16 | 1852-1859 | http://edamontology.org/topic_0634 | denotes | disease |
T17 | 1949-1956 | http://edamontology.org/topic_0634 | denotes | disease |
EDAM-DFO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 661-670 | http://edamontology.org/operation_3429 | denotes | generated |
T2 | 746-755 | http://edamontology.org/data_2044 | denotes | sequences |
T3 | 746-755 | http://edamontology.org/operation_3218 | denotes | sequences |
T4 | 1024-1029 | http://edamontology.org/data_2336 | denotes | phase |
T5 | 1024-1029 | http://edamontology.org/operation_3454 | denotes | phase |
T6 | 1088-1096 | http://edamontology.org/format_1208 | denotes | proteins |
T7 | 1088-1096 | http://edamontology.org/data_1467 | denotes | proteins |
T8 | 1259-1267 | http://edamontology.org/format_1208 | denotes | proteins |
T9 | 1259-1267 | http://edamontology.org/data_1467 | denotes | proteins |
T10 | 1384-1389 | http://edamontology.org/data_2336 | denotes | phase |
T11 | 1384-1389 | http://edamontology.org/operation_3454 | denotes | phase |
GlycoBiology-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 18-27 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colonizer |
T2 | 111-120 | http://purl.obolibrary.org/obo/MAT_0000191 | denotes | bacterium |
T3 | 285-292 | http://purl.obolibrary.org/obo/MAT_0000051 | denotes | stomach |
T4 | 309-318 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colonizes |
T5 | 1533-1542 | http://purl.obolibrary.org/obo/MAT_0000191 | denotes | bacterium |
T6 | 1703-1715 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | Colonization |
T7 | 1751-1758 | http://purl.obolibrary.org/obo/MAT_0000051 | denotes | stomach |
GlycoBiology-Motifs
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1282-1287 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
T2 | 1282-1289 | http://rdf.glycoinfo.org/glycan/G00048MO | denotes | Lewis b |
GlycoBiology-Epitope
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PD-GlycoEpitope-B_T1 | 1282-1289 | http://www.glycoepitope.jp/epitopes/EP0010 | denotes | Lewis b |
performance-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PD-UBERON-AE-B_T1 | 285-292 | http://purl.obolibrary.org/obo/UBERON_0000945 | denotes | stomach |
PD-UBERON-AE-B_T2 | 1751-1758 | http://purl.obolibrary.org/obo/UBERON_0000945 | denotes | stomach |
PD-UBERON-AE-B_T3 | 18-27 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colonizer |
PD-UBERON-AE-B_T4 | 309-318 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colonizes |
PD-UBERON-AE-B_T5 | 1703-1715 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | Colonization |
PD-UBERON-AE-B_T6 | 1410-1416 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 18-27 | Body_part | denotes | colonizer | http://purl.obolibrary.org/obo/MAT_0000526 |
T2 | 285-292 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/MAT_0000051 |
T3 | 309-318 | Body_part | denotes | colonizes | http://purl.obolibrary.org/obo/MAT_0000526 |
T4 | 1703-1715 | Body_part | denotes | Colonization | http://purl.obolibrary.org/obo/MAT_0000526 |
T5 | 1751-1758 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/MAT_0000051 |
HP-phenotype
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 485-499 | Phenotype | denotes | duodenal ulcer | HP:0002588 |
T2 | 505-523 | Phenotype | denotes | atrophic gastritis | HP:0002582 |
T3 | 552-566 | Phenotype | denotes | gastric cancer | HP:0012126 |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 394-406 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
T2 | 485-499 | Disease | denotes | duodenal ulcer | http://purl.obolibrary.org/obo/MONDO_0005412 |
T3 | 505-523 | Disease | denotes | atrophic gastritis | http://purl.obolibrary.org/obo/MONDO_0006665 |
T4 | 552-566 | Disease | denotes | gastric cancer | http://purl.obolibrary.org/obo/MONDO_0001056 |
T5 | 1763-1782 | Disease | denotes | esophageal diseases | http://purl.obolibrary.org/obo/MONDO_0003749 |
T6 | 1846-1859 | Disease | denotes | ulcer disease | http://purl.obolibrary.org/obo/MONDO_0043839 |
Glycan-GlyCosmos
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 1282-1289 | Glycan | denotes | Lewis b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00048MO |
GlyCosmos-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 1282-1289 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | Lewis b | http://www.glycoepitope.jp/epitopes/EP0010 |
GlyCosmos15-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 485-499 | Phenotype | denotes | duodenal ulcer | HP:0002588 |
T2 | 505-523 | Phenotype | denotes | atrophic gastritis | HP:0002582 |
T3 | 552-566 | Phenotype | denotes | gastric cancer | HP:0012126 |
GlyCosmos15-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 394-406 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
T2 | 485-499 | Disease | denotes | duodenal ulcer | http://purl.obolibrary.org/obo/MONDO_0005412 |
T3 | 505-523 | Disease | denotes | atrophic gastritis | http://purl.obolibrary.org/obo/MONDO_0006665 |
T4 | 552-566 | Disease | denotes | gastric cancer | http://purl.obolibrary.org/obo/MONDO_0001056 |
T5 | 1763-1782 | Disease | denotes | esophageal diseases | http://purl.obolibrary.org/obo/MONDO_0003749 |
T6 | 1846-1859 | Disease | denotes | ulcer disease | http://purl.obolibrary.org/obo/MONDO_0043839 |
GlyCosmos15-NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 4-9 | OrganismTaxon | denotes | human | 9606 |
T2 | 28-47 | OrganismTaxon | denotes | Helicobacter pylori | 210 |
T3 | 121-140 | OrganismTaxon | denotes | Helicobacter pylori | 210 |
T4 | 279-284 | OrganismTaxon | denotes | human | 9606 |
T5 | 611-623 | OrganismTaxon | denotes | homo sapiens | 9606 |
GlyCosmos15-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 285-292 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/UBERON_0000945 |
T2 | 1073-1087 | Body_part | denotes | outer membrane | http://purl.obolibrary.org/obo/GO_0019867 |
T3 | 1410-1416 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
T4 | 1751-1758 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/UBERON_0000945 |
GlyCosmos15-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 18-27 | Body_part | denotes | colonizer | http://purl.obolibrary.org/obo/MAT_0000526 |
T2 | 285-292 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/MAT_0000051 |
T3 | 309-318 | Body_part | denotes | colonizes | http://purl.obolibrary.org/obo/MAT_0000526 |
T4 | 1703-1715 | Body_part | denotes | Colonization | http://purl.obolibrary.org/obo/MAT_0000526 |
T5 | 1751-1758 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/MAT_0000051 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
TextSentencer_T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
TextSentencer_T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
TextSentencer_T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
TextSentencer_T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
TextSentencer_T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
TextSentencer_T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
TextSentencer_T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
TextSentencer_T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
TextSentencer_T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
TextSentencer_T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
TextSentencer_T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
TextSentencer_T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
TextSentencer_T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
TextSentencer_T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
TextSentencer_T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
GlyCosmos15-Sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-92 | Sentence | denotes | The human gastric colonizer Helicobacter pylori: a challenge for host-parasite glycobiology. |
T2 | 93-255 | Sentence | denotes | The Gram-negative bacterium Helicobacter pylori was first described in 1983 and currently represents one of the most active single research topics in biomedicine. |
T3 | 256-407 | Sentence | denotes | It is specific for the human stomach and chronically colonizes a majority of the global population, which results in a symptom-free local inflammation. |
T4 | 408-567 | Sentence | denotes | In 10-20% of carriers, gastroduodenal disease develops, including gastric or duodenal ulcer, and atrophic gastritis, which is a precondition to gastric cancer. |
T5 | 568-709 | Sentence | denotes | A probable long coevolution of microbe and homo sapiens in a restricted niche has apparently generated a complex and sophisticated interplay. |
T6 | 710-809 | Sentence | denotes | Access to complete bacterial genome sequences assists in a comparative functional characterization. |
T7 | 810-899 | Sentence | denotes | A dynamic glycosylation of both microbe and host cells is of growing interest to analyze. |
T8 | 900-1040 | Sentence | denotes | Several glycoforms of bacterial surface lipopolysaccharides show advanced molecular mimicry of host epitopes and a distinct phase variation. |
T9 | 1041-1159 | Sentence | denotes | An unusually large family of 32 outer membrane proteins probably reflects the complex interrelationship with the host. |
T10 | 1160-1400 | Sentence | denotes | The unique diversity found for carbohydrate-binding specificities may be mediated by these surface proteins, of which the Lewis b-binding adhesin is the only known example so far, and these binding activities are subject to phase variation. |
T11 | 1401-1528 | Sentence | denotes | The host mucosa glycosylation may also vary with different conditions, allowing a modulated crosstalk between microbe and host. |
T12 | 1529-1702 | Sentence | denotes | The bacterium actively stimulates the host inflammatory response, apparently for nutritional purposes, and there is no evidence for a spontaneous elimination of the microbe. |
T13 | 1703-1783 | Sentence | denotes | Colonization appears to be preventive for upper stomach and esophageal diseases. |
T14 | 1784-1860 | Sentence | denotes | Current antibiotic treatment eradicates the microbe and cures ulcer disease. |
T15 | 1861-1957 | Sentence | denotes | Alternative approaches must, however, be developed for a potential global prevention of disease. |
GlyCosmos15-Glycan
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 1282-1289 | Glycan | denotes | Lewis b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00048MO |
GlyCosmos15-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 1282-1289 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | Lewis b | http://www.glycoepitope.jp/epitopes/EP0010 |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 4-9 | OrganismTaxon | denotes | human | 9606 |
T2 | 28-47 | OrganismTaxon | denotes | Helicobacter pylori | 210 |
T3 | 121-140 | OrganismTaxon | denotes | Helicobacter pylori | 210 |
T4 | 279-284 | OrganismTaxon | denotes | human | 9606 |
T5 | 611-623 | OrganismTaxon | denotes | homo sapiens | 9606 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 285-292 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/UBERON_0000945 |
T2 | 1073-1087 | Body_part | denotes | outer membrane | http://purl.obolibrary.org/obo/GO_0019867 |
T3 | 1410-1416 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
T4 | 1751-1758 | Body_part | denotes | stomach | http://purl.obolibrary.org/obo/UBERON_0000945 |