PubMed:10702226
Annnotations
GGDB-2020
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 81-93 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T2 | 229-241 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T3 | 338-350 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T4 | 618-631 | https://acgg.asia/db/ggdb/info/gg058 | denotes | ST6GalNAc III |
| T5 | 802-814 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
ggdb-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 81-93 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T2 | 229-241 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T3 | 338-350 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| T4 | 618-631 | https://acgg.asia/db/ggdb/info/gg058 | denotes | ST6GalNAc III |
| T5 | 802-814 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 51-60 | Glycan_Motif | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G02149VR |
| T2 | 61-70 | Glycan_Motif | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54733XO |
| T3 | 896-900 | Glycan_Motif | denotes | GM1b | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G03277YI |
| T4 | 902-906 | Glycan_Motif | denotes | GT1b | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G40183QN|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G05952XV |
| T6 | 912-916 | Glycan_Motif | denotes | GD1a | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE |
| T8 | 1030-1039 | Glycan_Motif | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54733XO |
| T9 | 1045-1054 | Glycan_Motif | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G02149VR |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-100 | Sentence | denotes | Molecular cloning and expression of mouse GD1alpha/GT1aalpha/GQ1balpha synthase (ST6GalNAc VI) gene. |
| T2 | 101-303 | Sentence | denotes | A novel member of the mouse CMP-NeuAc:beta-N-acetylgalactosaminide alpha2,6-sialyltransferase (ST6GalNAc) subfamily, designated ST6GalNAc VI, was identified by BLAST analysis of expressed sequence tags. |
| T3 | 304-542 | Sentence | denotes | The sequence of the cDNA clone of ST6GalNAc VI encoded a type II membrane protein with 43 amino acids composing the cytoplasmic domain, 21 amino acids composing the transmembrane region, and 269 amino acids composing the catalytic domain. |
| T4 | 543-726 | Sentence | denotes | The predicted amino acid sequence showed homology to the previously cloned ST6GalNAc III, IV, and V, with common amino acid sequences in sialyl motif L and S among these four enzymes. |
| T5 | 727-946 | Sentence | denotes | A fusion protein with protein A and extracts from L cells transfected with ST6GalNAc VI in an expression vector showed enzyme activity of alpha2,6-sialyltransferase for GM1b, GT1b, and GD1a but not toward glycoproteins. |
| T6 | 947-1055 | Sentence | denotes | Thin layer chromatography-immunostaining revealed that the products were GD1alpha, GQ1balpha, and GT1aalpha. |
| T7 | 1056-1192 | Sentence | denotes | Northern blotting revealed that this gene was expressed in a wide range of mouse tissues such as colon, liver, heart, spleen, and brain. |
| T8 | 1193-1356 | Sentence | denotes | It is concluded that this enzyme is a novel sialyltransferase involved in the synthesis of alpha-series gangliosides in the nervous tissues and many other tissues. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 51-60 | https://glytoucan.org/Structures/Glycans/G02149VR | denotes | GT1aalpha |
| T2 | 61-70 | https://glytoucan.org/Structures/Glycans/G54733XO | denotes | GQ1balpha |
| T3 | 896-900 | https://glytoucan.org/Structures/Glycans/G03277YI | denotes | GM1b |
| T4 | 902-906 | https://glytoucan.org/Structures/Glycans/G05952XV | denotes | GT1b |
| T5 | 902-906 | https://glytoucan.org/Structures/Glycans/G40183QN | denotes | GT1b |
| T6 | 912-916 | https://glytoucan.org/Structures/Glycans/G46677TE | denotes | GD1a |
| T7 | 912-916 | https://glytoucan.org/Structures/Glycans/G69277LC | denotes | GD1a |
| T8 | 1030-1039 | https://glytoucan.org/Structures/Glycans/G54733XO | denotes | GQ1balpha |
| T9 | 1045-1054 | https://glytoucan.org/Structures/Glycans/G02149VR | denotes | GT1aalpha |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1153-1158 | http://purl.obolibrary.org/obo/MAT_0000526 | denotes | colon |
| T2 | 1160-1165 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T3 | 1167-1172 | http://purl.obolibrary.org/obo/MAT_0000036 | denotes | heart |
| T4 | 1174-1180 | http://purl.obolibrary.org/obo/MAT_0000085 | denotes | spleen |
| T5 | 1186-1191 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 51-60 | http://www.glycoepitope.jp/epitopes/EP0111 | denotes | GT1aalpha |
| T2 | 61-70 | http://www.glycoepitope.jp/epitopes/EP0112 | denotes | GQ1balpha |
| T3 | 896-900 | http://www.glycoepitope.jp/epitopes/EP0048 | denotes | GM1b |
| T4 | 902-906 | http://www.glycoepitope.jp/epitopes/EP0067 | denotes | GT1b |
| T5 | 912-916 | http://www.glycoepitope.jp/epitopes/EP0056 | denotes | GD1a |
| T6 | 1030-1039 | http://www.glycoepitope.jp/epitopes/EP0112 | denotes | GQ1balpha |
| T7 | 1045-1054 | http://www.glycoepitope.jp/epitopes/EP0111 | denotes | GT1aalpha |
glycogenes
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoGenes20190927-B_T1 | 81-93 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| PD-GlycoGenes20190927-B_T2 | 218-228 | url | denotes | designated |
| PD-GlycoGenes20190927-B_T3 | 229-241 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| PD-GlycoGenes20190927-B_T4 | 338-350 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
| PD-GlycoGenes20190927-B_T5 | 366-368 | https://acgg.asia/db/ggdb/info/gg111 | denotes | II |
| PD-GlycoGenes20190927-B_T6 | 618-631 | https://acgg.asia/db/ggdb/info/gg058 | denotes | ST6GalNAc III |
| PD-GlycoGenes20190927-B_T7 | 802-814 | https://acgg.asia/db/ggdb/info/gg061 | denotes | ST6GalNAc VI |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1153-1158 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
| T2 | 1160-1165 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T3 | 1167-1172 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/MAT_0000036 |
| T4 | 1174-1180 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/MAT_0000085 |
| T5 | 1186-1191 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 42-50 | Glycan | denotes | GD1alpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G07394RV |
| T2 | 51-60 | Glycan | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02149VR |
| T3 | 61-70 | Glycan | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54733XO |
| T4 | 896-900 | Glycan | denotes | GM1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI |
| T5 | 902-906 | Glycan | denotes | GT1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN |
| T6 | 912-916 | Glycan | denotes | GD1a | https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE |
| T7 | 1020-1028 | Glycan | denotes | GD1alpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G07394RV |
| T8 | 1030-1039 | Glycan | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54733XO |
| T9 | 1045-1054 | Glycan | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02149VR |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 36-41 | OrganismTaxon | denotes | mouse | 10088|10090 |
| T3 | 123-128 | OrganismTaxon | denotes | mouse | 10088|10090 |
| T5 | 1131-1136 | OrganismTaxon | denotes | mouse | 10088|10090 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 369-377 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 420-431 | Body_part | denotes | cytoplasmic | http://purl.obolibrary.org/obo/GO_0005737 |
| T5 | 469-482 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
| T6 | 952-957 | Body_part | denotes | layer | http://purl.obolibrary.org/obo/UBERON_0000119|http://purl.obolibrary.org/obo/UBERON_0022303 |
| T8 | 1153-1158 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T9 | 1160-1165 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T10 | 1167-1172 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948|http://purl.obolibrary.org/obo/UBERON_0007100|http://purl.obolibrary.org/obo/UBERON_0015228|http://purl.obolibrary.org/obo/UBERON_0015230 |
| T14 | 1174-1180 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
| T15 | 1186-1191 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T17 | 1317-1332 | Body_part | denotes | nervous tissues | http://purl.obolibrary.org/obo/UBERON_0003714 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 1153-1158 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/MAT_0000526 |
| T2 | 1160-1165 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T3 | 1167-1172 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/MAT_0000036 |
| T4 | 1174-1180 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/MAT_0000085 |
| T5 | 1186-1191 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-100 | Sentence | denotes | Molecular cloning and expression of mouse GD1alpha/GT1aalpha/GQ1balpha synthase (ST6GalNAc VI) gene. |
| T2 | 101-303 | Sentence | denotes | A novel member of the mouse CMP-NeuAc:beta-N-acetylgalactosaminide alpha2,6-sialyltransferase (ST6GalNAc) subfamily, designated ST6GalNAc VI, was identified by BLAST analysis of expressed sequence tags. |
| T3 | 304-542 | Sentence | denotes | The sequence of the cDNA clone of ST6GalNAc VI encoded a type II membrane protein with 43 amino acids composing the cytoplasmic domain, 21 amino acids composing the transmembrane region, and 269 amino acids composing the catalytic domain. |
| T4 | 543-726 | Sentence | denotes | The predicted amino acid sequence showed homology to the previously cloned ST6GalNAc III, IV, and V, with common amino acid sequences in sialyl motif L and S among these four enzymes. |
| T5 | 727-946 | Sentence | denotes | A fusion protein with protein A and extracts from L cells transfected with ST6GalNAc VI in an expression vector showed enzyme activity of alpha2,6-sialyltransferase for GM1b, GT1b, and GD1a but not toward glycoproteins. |
| T6 | 947-1055 | Sentence | denotes | Thin layer chromatography-immunostaining revealed that the products were GD1alpha, GQ1balpha, and GT1aalpha. |
| T7 | 1056-1192 | Sentence | denotes | Northern blotting revealed that this gene was expressed in a wide range of mouse tissues such as colon, liver, heart, spleen, and brain. |
| T8 | 1193-1356 | Sentence | denotes | It is concluded that this enzyme is a novel sialyltransferase involved in the synthesis of alpha-series gangliosides in the nervous tissues and many other tissues. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-100 | Sentence | denotes | Molecular cloning and expression of mouse GD1alpha/GT1aalpha/GQ1balpha synthase (ST6GalNAc VI) gene. |
| T2 | 101-303 | Sentence | denotes | A novel member of the mouse CMP-NeuAc:beta-N-acetylgalactosaminide alpha2,6-sialyltransferase (ST6GalNAc) subfamily, designated ST6GalNAc VI, was identified by BLAST analysis of expressed sequence tags. |
| T3 | 304-542 | Sentence | denotes | The sequence of the cDNA clone of ST6GalNAc VI encoded a type II membrane protein with 43 amino acids composing the cytoplasmic domain, 21 amino acids composing the transmembrane region, and 269 amino acids composing the catalytic domain. |
| T4 | 543-726 | Sentence | denotes | The predicted amino acid sequence showed homology to the previously cloned ST6GalNAc III, IV, and V, with common amino acid sequences in sialyl motif L and S among these four enzymes. |
| T5 | 727-946 | Sentence | denotes | A fusion protein with protein A and extracts from L cells transfected with ST6GalNAc VI in an expression vector showed enzyme activity of alpha2,6-sialyltransferase for GM1b, GT1b, and GD1a but not toward glycoproteins. |
| T6 | 947-1055 | Sentence | denotes | Thin layer chromatography-immunostaining revealed that the products were GD1alpha, GQ1balpha, and GT1aalpha. |
| T7 | 1056-1192 | Sentence | denotes | Northern blotting revealed that this gene was expressed in a wide range of mouse tissues such as colon, liver, heart, spleen, and brain. |
| T8 | 1193-1356 | Sentence | denotes | It is concluded that this enzyme is a novel sialyltransferase involved in the synthesis of alpha-series gangliosides in the nervous tissues and many other tissues. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 42-50 | Glycan | denotes | GD1alpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G07394RV |
| T2 | 51-60 | Glycan | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02149VR |
| T3 | 61-70 | Glycan | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54733XO |
| T4 | 896-900 | Glycan | denotes | GM1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI |
| T5 | 902-906 | Glycan | denotes | GT1b | https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN |
| T6 | 912-916 | Glycan | denotes | GD1a | https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE |
| T7 | 1020-1028 | Glycan | denotes | GD1alpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G07394RV |
| T8 | 1030-1039 | Glycan | denotes | GQ1balpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G54733XO |
| T9 | 1045-1054 | Glycan | denotes | GT1aalpha | https://api.glycosmos.org/wurcs2image/latest/png/binary/G02149VR |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 51-60 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1aalpha | http://www.glycoepitope.jp/epitopes/EP0111 |
| T2 | 61-70 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GQ1balpha | http://www.glycoepitope.jp/epitopes/EP0112 |
| T3 | 896-900 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1b | http://www.glycoepitope.jp/epitopes/EP0048 |
| T4 | 902-906 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1b | http://www.glycoepitope.jp/epitopes/EP0067 |
| T5 | 912-916 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1a | http://www.glycoepitope.jp/epitopes/EP0056 |
| T6 | 1030-1039 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GQ1balpha | http://www.glycoepitope.jp/epitopes/EP0112 |
| T7 | 1045-1054 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1aalpha | http://www.glycoepitope.jp/epitopes/EP0111 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 36-41 | OrganismTaxon | denotes | mouse | 10088|10090 |
| T3 | 123-128 | OrganismTaxon | denotes | mouse | 10088|10090 |
| T5 | 1131-1136 | OrganismTaxon | denotes | mouse | 10088|10090 |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 51-60 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1aalpha | http://www.glycoepitope.jp/epitopes/EP0111 |
| T2 | 61-70 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GQ1balpha | http://www.glycoepitope.jp/epitopes/EP0112 |
| T3 | 896-900 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1b | http://www.glycoepitope.jp/epitopes/EP0048 |
| T4 | 902-906 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1b | http://www.glycoepitope.jp/epitopes/EP0067 |
| T5 | 912-916 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GD1a | http://www.glycoepitope.jp/epitopes/EP0056 |
| T6 | 1030-1039 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GQ1balpha | http://www.glycoepitope.jp/epitopes/EP0112 |
| T7 | 1045-1054 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GT1aalpha | http://www.glycoepitope.jp/epitopes/EP0111 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 369-377 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 420-431 | Body_part | denotes | cytoplasmic | http://purl.obolibrary.org/obo/GO_0005737 |
| T5 | 469-482 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |
| T6 | 952-957 | Body_part | denotes | layer | http://purl.obolibrary.org/obo/UBERON_0000119|http://purl.obolibrary.org/obo/UBERON_0022303 |
| T8 | 1153-1158 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
| T9 | 1160-1165 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T10 | 1167-1172 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948|http://purl.obolibrary.org/obo/UBERON_0007100|http://purl.obolibrary.org/obo/UBERON_0015228|http://purl.obolibrary.org/obo/UBERON_0015230 |
| T14 | 1174-1180 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
| T15 | 1186-1191 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
| T17 | 1317-1332 | Body_part | denotes | nervous tissues | http://purl.obolibrary.org/obo/UBERON_0003714 |