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PubMed:10570220 JSONTXT

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GlyCosmos15-Species

Id Subject Object Predicate Lexical cue db_id
68 1458-1466 Species denotes HIV-1LAI
73 1661-1666 Species denotes HIV-1 11676

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 411-418 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T2 411-418 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T3 422-433 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T4 759-766 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T5 759-766 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T6 771-782 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T7 1035-1042 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T8 1035-1042 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T9 1046-1057 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T10 1103-1110 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T11 1236-1243 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T12 1236-1243 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T13 1256-1263 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T14 1367-1374 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T15 1367-1374 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T16 1376-1387 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T17 1588-1595 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T18 1588-1595 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 411-418 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T3 422-433 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T4 759-766 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T6 771-782 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T7 1035-1042 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T9 1046-1057 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T10 1103-1110 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T11 1236-1243 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T13 1256-1263 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T14 1367-1374 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T16 1376-1387 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T17 1588-1595 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 411-418 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T2 411-418 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T3 422-433 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T4 759-766 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T5 759-766 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T6 771-782 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T7 1035-1042 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T8 1035-1042 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T9 1046-1057 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T10 1103-1110 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T11 1236-1243 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T12 1236-1243 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T13 1256-1263 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T14 1367-1374 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T15 1367-1374 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin
T16 1376-1387 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T17 1588-1595 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T18 1588-1595 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 422-433 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T2 771-782 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T3 1046-1057 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T4 1376-1387 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 11-28 FMAID:63011 denotes glycosaminoglycan
_T2 11-28 FMAID:167395 denotes glycosaminoglycan
_T3 51-63 FMAID:83624 denotes stromal cell
_T4 51-63 FMAID:197708 denotes stromal cell
_T5 111-123 FMAID:200942 denotes cell surface
_T6 111-123 FMAID:212684 denotes cell surface
_T7 116-123 FMAID:50594 denotes surface
_T8 116-123 FMAID:146300 denotes surface
_T9 124-142 FMAID:63011 denotes glycosaminoglycans
_T10 124-142 FMAID:167395 denotes glycosaminoglycans
_T11 144-148 FMAID:167404 denotes GAGs
_T12 181-193 FMAID:197708 denotes stromal cell
_T13 181-193 FMAID:83624 denotes stromal cell
_T14 231-243 FMAID:198000 denotes lymphoid CEM
_T15 231-243 FMAID:84065 denotes lymphoid CEM
_T16 247-256 FMAID:62864 denotes monocytic
_T17 247-256 FMAID:167164 denotes monocytic
_T18 262-267 FMAID:169002 denotes cells
_T19 262-267 FMAID:68646 denotes cells
_T20 297-302 FMAID:169002 denotes cells
_T21 297-302 FMAID:68646 denotes cells
_T22 411-418 FMAID:167420 denotes heparin
_T23 411-418 FMAID:82839 denotes heparin
_T24 422-441 FMAID:82837 denotes chondroitin sulfate
_T25 422-441 FMAID:196838 denotes chondroitin sulfate
_T26 505-510 FMAID:68646 denotes cells
_T27 505-510 FMAID:169002 denotes cells
_T28 639-643 FMAID:167404 denotes GAGs
_T29 676-681 FMAID:169002 denotes cells
_T30 676-681 FMAID:68646 denotes cells
_T31 759-766 FMAID:167420 denotes heparin
_T32 759-766 FMAID:82839 denotes heparin
_T33 771-790 FMAID:82837 denotes chondroitin sulfate
_T34 771-790 FMAID:196838 denotes chondroitin sulfate
_T35 858-863 FMAID:169002 denotes cells
_T36 858-863 FMAID:68646 denotes cells
_T37 882-886 FMAID:167404 denotes GAGs
_T38 975-980 FMAID:169002 denotes cells
_T39 975-980 FMAID:68646 denotes cells
_T40 1035-1042 FMAID:167420 denotes heparin
_T41 1035-1042 FMAID:82839 denotes heparin
_T42 1046-1065 FMAID:196838 denotes chondroitin sulfate
_T43 1046-1065 FMAID:82837 denotes chondroitin sulfate
_T44 1097-1101 FMAID:167404 denotes GAGs
_T45 1103-1110 FMAID:196796 denotes mannose
_T46 1103-1110 FMAID:82801 denotes mannose
_T47 1183-1188 FMAID:68646 denotes cells
_T48 1183-1188 FMAID:169002 denotes cells
_T49 1236-1243 FMAID:82839 denotes heparin
_T50 1236-1243 FMAID:167420 denotes heparin
_T51 1256-1263 FMAID:196796 denotes mannose
_T52 1256-1263 FMAID:82801 denotes mannose
_T53 1367-1374 FMAID:167420 denotes heparin
_T54 1367-1374 FMAID:82839 denotes heparin
_T55 1376-1395 FMAID:196838 denotes chondroitin sulfate
_T56 1376-1395 FMAID:82837 denotes chondroitin sulfate
_T57 1485-1497 FMAID:197276 denotes carbohydrate
_T58 1485-1497 FMAID:82737 denotes carbohydrate
_T59 1573-1577 FMAID:167404 denotes GAGs
_T60 1588-1595 FMAID:167420 denotes heparin
_T61 1588-1595 FMAID:82839 denotes heparin
_T62 1701-1705 FMAID:167404 denotes GAGs
_T63 1725-1737 FMAID:200942 denotes cell surface
_T64 1725-1737 FMAID:212684 denotes cell surface
_T65 1730-1737 FMAID:146300 denotes surface
_T66 1730-1737 FMAID:50594 denotes surface

uniprot-human

Id Subject Object Predicate Lexical cue
T1 225-228 http://www.uniprot.org/uniprot/P01730 denotes CD4
T2 324-338 http://www.uniprot.org/uniprot/P34059 denotes chondroitinase
T3 724-738 http://www.uniprot.org/uniprot/P34059 denotes chondroitinase
T4 1439-1444 http://www.uniprot.org/uniprot/Q14624 denotes gp120

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 225-228 http://www.uniprot.org/uniprot/P06332 denotes CD4
T2 324-338 http://www.uniprot.org/uniprot/Q571E4 denotes chondroitinase
T3 724-738 http://www.uniprot.org/uniprot/Q571E4 denotes chondroitinase
T4 1667-1670 http://www.uniprot.org/uniprot/P11370 denotes Env

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 262-267 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T2 297-302 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 505-510 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T4 676-681 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T5 858-863 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T6 975-980 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T7 1183-1188 http://purl.bioontology.org/ontology/STY/T025 denotes cells

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-92 Sentence denotes Glycan and glycosaminoglycan binding properties of stromal cell-derived factor (SDF)-1alpha.
TextSentencer_T2 93-402 Sentence denotes We show here that cell surface glycosaminoglycans (GAGs) are involved in the binding of stromal cell-derived factor (SDF)-1alpha to CD4(+)lymphoid CEM or monocytic U937 cells, inasmuch as pretreating the cells with heparitinase or chondroitinase inhibits SDF-1alpha binding by 40-41% and 31-35%, respectively.
TextSentencer_T3 403-587 Sentence denotes Soluble heparin or chondroitin sulfate partially but significantly inhibits SDF-1alpha binding to the cells by 45-52% and 42-56%, respectively, while dextran has no significant effect.
TextSentencer_T4 588-682 Sentence denotes Taken together, these results indicate the role of GAGs in SDF-1alpha attachment to the cells.
TextSentencer_T5 683-919 Sentence denotes However, the effects of heparitinase and chondroitinase as well as those of heparin and chondroitin sulfate are not additive, which suggests that SDF-1alpha may attach to the cells through different GAGs, and also through other ligands.
TextSentencer_T6 920-991 Sentence denotes Soluble mannan also inhibits SDF-1alpha binding to the cells by 30-33%.
TextSentencer_T7 992-1078 Sentence denotes Additivity between this effect and that of heparin or chondroitin sulfate is observed.
TextSentencer_T8 1079-1189 Sentence denotes Therefore, beside GAGs, mannose-containing species may also be involved in SDF-1alpha attachment to the cells.
TextSentencer_T9 1190-1408 Sentence denotes Accordingly, SDF-1alpha specifically binds to heparin-agarose and mannose-divinylsulfone agarose affinity matrices, and these interactions are inhibited respectively by soluble heparin, chondroitin sulfate, and mannan.
TextSentencer_T10 1409-1596 Sentence denotes We have previously shown that gp120 of X4 strain HIV-1LAI presents specific carbohydrate-binding properties for mannosylated derivatives, including mannan, and for GAGs including heparin.
TextSentencer_T11 1597-1738 Sentence denotes The present data therefore indicate that, in the same manner as HIV-1 Env, SDF-1alpha can interact with GAGs and glycans at the cell surface.
T1 0-92 Sentence denotes Glycan and glycosaminoglycan binding properties of stromal cell-derived factor (SDF)-1alpha.
T2 93-402 Sentence denotes We show here that cell surface glycosaminoglycans (GAGs) are involved in the binding of stromal cell-derived factor (SDF)-1alpha to CD4(+)lymphoid CEM or monocytic U937 cells, inasmuch as pretreating the cells with heparitinase or chondroitinase inhibits SDF-1alpha binding by 40-41% and 31-35%, respectively.
T3 403-587 Sentence denotes Soluble heparin or chondroitin sulfate partially but significantly inhibits SDF-1alpha binding to the cells by 45-52% and 42-56%, respectively, while dextran has no significant effect.
T4 588-682 Sentence denotes Taken together, these results indicate the role of GAGs in SDF-1alpha attachment to the cells.
T5 683-919 Sentence denotes However, the effects of heparitinase and chondroitinase as well as those of heparin and chondroitin sulfate are not additive, which suggests that SDF-1alpha may attach to the cells through different GAGs, and also through other ligands.
T6 920-991 Sentence denotes Soluble mannan also inhibits SDF-1alpha binding to the cells by 30-33%.
T7 992-1078 Sentence denotes Additivity between this effect and that of heparin or chondroitin sulfate is observed.
T8 1079-1189 Sentence denotes Therefore, beside GAGs, mannose-containing species may also be involved in SDF-1alpha attachment to the cells.
T9 1190-1408 Sentence denotes Accordingly, SDF-1alpha specifically binds to heparin-agarose and mannose-divinylsulfone agarose affinity matrices, and these interactions are inhibited respectively by soluble heparin, chondroitin sulfate, and mannan.
T10 1409-1596 Sentence denotes We have previously shown that gp120 of X4 strain HIV-1LAI presents specific carbohydrate-binding properties for mannosylated derivatives, including mannan, and for GAGs including heparin.
T11 1597-1738 Sentence denotes The present data therefore indicate that, in the same manner as HIV-1 Env, SDF-1alpha can interact with GAGs and glycans at the cell surface.
T1 0-92 Sentence denotes Glycan and glycosaminoglycan binding properties of stromal cell-derived factor (SDF)-1alpha.
T2 93-402 Sentence denotes We show here that cell surface glycosaminoglycans (GAGs) are involved in the binding of stromal cell-derived factor (SDF)-1alpha to CD4(+)lymphoid CEM or monocytic U937 cells, inasmuch as pretreating the cells with heparitinase or chondroitinase inhibits SDF-1alpha binding by 40-41% and 31-35%, respectively.
T3 403-587 Sentence denotes Soluble heparin or chondroitin sulfate partially but significantly inhibits SDF-1alpha binding to the cells by 45-52% and 42-56%, respectively, while dextran has no significant effect.
T4 588-682 Sentence denotes Taken together, these results indicate the role of GAGs in SDF-1alpha attachment to the cells.
T5 683-919 Sentence denotes However, the effects of heparitinase and chondroitinase as well as those of heparin and chondroitin sulfate are not additive, which suggests that SDF-1alpha may attach to the cells through different GAGs, and also through other ligands.
T6 920-991 Sentence denotes Soluble mannan also inhibits SDF-1alpha binding to the cells by 30-33%.
T7 992-1078 Sentence denotes Additivity between this effect and that of heparin or chondroitin sulfate is observed.
T8 1079-1189 Sentence denotes Therefore, beside GAGs, mannose-containing species may also be involved in SDF-1alpha attachment to the cells.
T9 1190-1408 Sentence denotes Accordingly, SDF-1alpha specifically binds to heparin-agarose and mannose-divinylsulfone agarose affinity matrices, and these interactions are inhibited respectively by soluble heparin, chondroitin sulfate, and mannan.
T10 1409-1596 Sentence denotes We have previously shown that gp120 of X4 strain HIV-1LAI presents specific carbohydrate-binding properties for mannosylated derivatives, including mannan, and for GAGs including heparin.
T11 1597-1738 Sentence denotes The present data therefore indicate that, in the same manner as HIV-1 Env, SDF-1alpha can interact with GAGs and glycans at the cell surface.

GO-BP

Id Subject Object Predicate Lexical cue
T1 324-338 http://purl.obolibrary.org/obo/GO_0043890 denotes chondroitinase
T2 724-738 http://purl.obolibrary.org/obo/GO_0043890 denotes chondroitinase
T3 434-441 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfate
T4 783-790 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfate
T5 1058-1065 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfate
T6 1388-1395 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfate
T7 1521-1533 http://purl.obolibrary.org/obo/GO_0097502 denotes mannosylated

GO-MF

Id Subject Object Predicate Lexical cue
T1 11-36 http://purl.obolibrary.org/obo/GO_0005539 denotes glycosaminoglycan binding
T2 29-36 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 170-177 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 359-366 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T5 490-497 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T6 960-967 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T7 1227-1232 http://purl.obolibrary.org/obo/GO_0070026 denotes binds
T8 29-36 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T9 170-177 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T10 359-366 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T11 490-497 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T12 960-967 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T13 1227-1232 http://purl.obolibrary.org/obo/GO_0003680 denotes binds
T14 29-36 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T15 170-177 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T16 359-366 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T17 490-497 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T18 960-967 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T19 1227-1232 http://purl.obolibrary.org/obo/GO_0017091 denotes binds
T20 29-36 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T21 170-177 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T22 359-366 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T23 490-497 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T24 960-967 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T25 1227-1232 http://purl.obolibrary.org/obo/GO_0005488 denotes binds
T26 911-918 http://purl.obolibrary.org/obo/GO_0005488 denotes ligands
T27 1227-1243 http://purl.obolibrary.org/obo/GO_0008201 denotes binds to heparin
T28 1485-1505 http://purl.obolibrary.org/obo/GO_0030246 denotes carbohydrate-binding

GO-CC

Id Subject Object Predicate Lexical cue
T1 59-63 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 111-115 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 189-193 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4 262-267 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 297-302 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6 505-510 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7 676-681 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8 858-863 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T9 975-980 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T10 1183-1188 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T11 111-123 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface
T12 1725-1737 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 411-418 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T2 759-766 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T3 1035-1042 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T4 1236-1243 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T5 1367-1374 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T6 1588-1595 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin
T7 422-433 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin
T8 771-782 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin
T9 1046-1057 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin
T10 1376-1387 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin
T11 422-441 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin sulfate
T12 771-790 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin sulfate
T13 1046-1065 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin sulfate
T14 1376-1395 http://rdf.glycoinfo.org/glycan/G00018MO denotes chondroitin sulfate

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 422-433 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
PD-GlycoEpitope-B_T2 771-782 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
PD-GlycoEpitope-B_T3 1046-1057 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
PD-GlycoEpitope-B_T4 1376-1387 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
PD-GlycoEpitope-B_T5 517-519 http://www.glycoepitope.jp/epitopes/AN0785 denotes 52

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 422-433 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 771-782 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 1046-1057 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 1376-1387 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 422-433 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 771-782 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 1046-1057 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 1376-1387 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 422-433 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 771-782 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 1046-1057 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 1376-1387 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 51-63 Cell denotes stromal cell http://purl.obolibrary.org/obo/CL:0000499
T2 181-193 Cell denotes stromal cell http://purl.obolibrary.org/obo/CL:0000499
T3 247-256 Cell denotes monocytic http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T5 658-681 Cell denotes attachment to the cells http://purl.obolibrary.org/obo/CL:0000386
T6 1165-1188 Cell denotes attachment to the cells http://purl.obolibrary.org/obo/CL:0000386

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 51-63 Body_part denotes stromal cell http://purl.obolibrary.org/obo/CL_0000499
T2 181-193 Body_part denotes stromal cell http://purl.obolibrary.org/obo/CL_0000499

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 422-433 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 771-782 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 1046-1057 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 1376-1387 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-92 Sentence denotes Glycan and glycosaminoglycan binding properties of stromal cell-derived factor (SDF)-1alpha.
T2 93-402 Sentence denotes We show here that cell surface glycosaminoglycans (GAGs) are involved in the binding of stromal cell-derived factor (SDF)-1alpha to CD4(+)lymphoid CEM or monocytic U937 cells, inasmuch as pretreating the cells with heparitinase or chondroitinase inhibits SDF-1alpha binding by 40-41% and 31-35%, respectively.
T3 403-587 Sentence denotes Soluble heparin or chondroitin sulfate partially but significantly inhibits SDF-1alpha binding to the cells by 45-52% and 42-56%, respectively, while dextran has no significant effect.
T4 588-682 Sentence denotes Taken together, these results indicate the role of GAGs in SDF-1alpha attachment to the cells.
T5 683-919 Sentence denotes However, the effects of heparitinase and chondroitinase as well as those of heparin and chondroitin sulfate are not additive, which suggests that SDF-1alpha may attach to the cells through different GAGs, and also through other ligands.
T6 920-991 Sentence denotes Soluble mannan also inhibits SDF-1alpha binding to the cells by 30-33%.
T7 992-1078 Sentence denotes Additivity between this effect and that of heparin or chondroitin sulfate is observed.
T8 1079-1189 Sentence denotes Therefore, beside GAGs, mannose-containing species may also be involved in SDF-1alpha attachment to the cells.
T9 1190-1408 Sentence denotes Accordingly, SDF-1alpha specifically binds to heparin-agarose and mannose-divinylsulfone agarose affinity matrices, and these interactions are inhibited respectively by soluble heparin, chondroitin sulfate, and mannan.
T10 1409-1596 Sentence denotes We have previously shown that gp120 of X4 strain HIV-1LAI presents specific carbohydrate-binding properties for mannosylated derivatives, including mannan, and for GAGs including heparin.
T11 1597-1738 Sentence denotes The present data therefore indicate that, in the same manner as HIV-1 Env, SDF-1alpha can interact with GAGs and glycans at the cell surface.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 111-123 Body_part denotes cell surface FMA:67653
T2 247-256 Body_part denotes monocytic FMA:62864
T3 1458-1461 Body_part denotes HIV FMA:278683
T4 1661-1664 Body_part denotes HIV FMA:278683
T5 1725-1737 Body_part denotes cell surface FMA:67653

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 51-63 Body_part denotes stromal cell http://purl.obolibrary.org/obo/CL_0000499
T2 181-193 Body_part denotes stromal cell http://purl.obolibrary.org/obo/CL_0000499

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 51-63 Cell denotes stromal cell http://purl.obolibrary.org/obo/CL:0000499
T2 181-193 Cell denotes stromal cell http://purl.obolibrary.org/obo/CL:0000499
T3 247-256 Cell denotes monocytic http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T5 658-681 Cell denotes attachment to the cells http://purl.obolibrary.org/obo/CL:0000386
T6 1165-1188 Cell denotes attachment to the cells http://purl.obolibrary.org/obo/CL:0000386