> top > docs > PubMed:10536037 > annotations

PubMed:10536037 JSONTXT

Annnotations TAB JSON ListView MergeView

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 51-72 https://glytoucan.org/Structures/Glycans/G27025MB denotes N-acetylgalactosamine
T2 162-180 https://glytoucan.org/Structures/Glycans/G08371CD denotes sialyl-Tn antigens
T3 162-180 https://glytoucan.org/Structures/Glycans/G36123IU denotes sialyl-Tn antigens
T4 370-392 https://glytoucan.org/Structures/Glycans/G27025MB denotes N -acetylgalactosamine

GGDB-2020

Id Subject Object Predicate Lexical cue
T1 101-112 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T2 1221-1232 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T3 1338-1349 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T4 1481-1492 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T5 1562-1573 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T6 1820-1831 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I

ggdb-test

Id Subject Object Predicate Lexical cue
T1 101-112 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T2 1221-1232 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T3 1338-1349 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T4 1481-1492 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T5 1562-1573 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
T6 1820-1831 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 51-72 Glycan_Motif denotes N-acetylgalactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB
T2 162-180 Glycan_Motif denotes sialyl-Tn antigens https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G36123IU|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G08371CD
T4 370-392 Glycan_Motif denotes N -acetylgalactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G27025MB

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 51-72 https://glytoucan.org/Structures/Glycans/G27025MB denotes N-acetylgalactosamine
T2 162-180 https://glytoucan.org/Structures/Glycans/G08371CD denotes sialyl-Tn antigens
T3 162-180 https://glytoucan.org/Structures/Glycans/G36123IU denotes sialyl-Tn antigens
T4 370-392 https://glytoucan.org/Structures/Glycans/G27025MB denotes N -acetylgalactosamine

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 648-658 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T2 1434-1438 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T3 1732-1742 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T4 1755-1761 http://purl.obolibrary.org/obo/MAT_0000021 denotes glands

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 226-232 HP_0002664 denotes cancer
T2 308-314 HP_0002664 denotes cancer
T3 1062-1068 HP_0002664 denotes cancer
T4 1691-1705 HP_0012126 denotes gastric cancer
T5 1699-1705 HP_0002664 denotes cancer

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 34-38 FMAID:198663 denotes gene
_T2 51-72 FMAID:82786 denotes N-acetylgalactosamine
_T27 1716-1728 FMAID:102374 denotes Goblet cells
_T3 51-72 FMAID:196780 denotes N-acetylgalactosamine
_T4 353-357 FMAID:198663 denotes gene
_T5 370-392 FMAID:82786 denotes N -acetylgalactosamine
_T6 370-392 FMAID:196780 denotes N -acetylgalactosamine
_T7 594-598 FMAID:200291 denotes DNAs
_T8 613-617 FMAID:165177 denotes RNAs
_T9 627-634 FMAID:216363 denotes pyloric
_T10 635-642 FMAID:261267 denotes mucosae
_T11 635-642 FMAID:85355 denotes mucosae
_T12 635-658 FMAID:105935 denotes mucosae with intestinal
_T13 648-658 FMAID:7199 denotes intestinal
_T14 648-658 FMAID:226991 denotes intestinal
_T15 648-658 FMAID:93674 denotes intestinal
_T16 943-953 FMAID:196728 denotes amino acid
_T17 943-953 FMAID:82739 denotes amino acid
_T18 968-974 FMAID:171168 denotes latter
_T19 968-974 FMAID:30332 denotes latter
_T20 1069-1074 FMAID:169002 denotes cells
_T21 1069-1074 FMAID:68646 denotes cells
_T22 1277-1287 FMAID:196728 denotes amino acid
_T23 1277-1287 FMAID:82739 denotes amino acid
_T24 1691-1698 FMAID:167337 denotes gastric
_T25 1706-1711 FMAID:169002 denotes cells
_T26 1706-1711 FMAID:68646 denotes cells
_T28 1716-1728 FMAID:13148 denotes Goblet cells
_T29 1716-1742 FMAID:201942 denotes Goblet cells in intestinal
_T30 1716-1742 FMAID:201943 denotes Goblet cells in intestinal
_T31 1716-1742 FMAID:86929 denotes Goblet cells in intestinal
_T32 1723-1728 FMAID:68646 denotes cells
_T33 1723-1728 FMAID:169002 denotes cells
_T34 1732-1742 FMAID:7199 denotes intestinal
_T35 1732-1742 FMAID:226991 denotes intestinal
_T36 1732-1742 FMAID:93674 denotes intestinal
_T37 1755-1761 FMAID:200677 denotes glands
_T38 1755-1761 FMAID:172512 denotes glands
_T39 1755-1761 FMAID:86294 denotes glands
_T40 1832-1836 FMAID:198663 denotes gene

uniprot-human

Id Subject Object Predicate Lexical cue
T1 101-112 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T2 1221-1232 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T3 1338-1349 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T4 1481-1492 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T5 1562-1573 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T6 1820-1831 http://www.uniprot.org/uniprot/Q9NSC7 denotes ST6GalNAc I
T7 1374-1396 http://www.uniprot.org/uniprot/Q96JF0 denotes sialyltransferases, (2

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 101-112 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T2 1221-1232 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T3 1338-1349 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T4 1481-1492 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T5 1562-1573 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T6 1820-1831 http://www.uniprot.org/uniprot/Q9QZ39 denotes ST6GalNAc I
T7 1374-1396 http://www.uniprot.org/uniprot/Q76K27 denotes sialyltransferases, (2

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 144-150 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T2 226-232 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T3 280-287 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T4 308-314 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T5 659-669 http://purl.bioontology.org/ontology/NCBITAXON/112376 denotes metaplasia
T6 943-962 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequence
T7 1062-1068 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T8 1069-1074 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T9 1277-1296 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequence
T10 1699-1705 http://purl.bioontology.org/ontology/NCBITAXON/6754 denotes cancer
T11 1706-1711 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T12 1723-1728 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T13 1743-1754 http://purl.bioontology.org/ontology/NCBITAXON/473649 denotes metaplastic

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-181 Sentence denotes Cloning and expression of a human gene encoding an N-acetylgalactosamine-alpha2,6-sialyltransferase (ST6GalNAc I): a candidate for synthesis of cancer-associated sialyl-Tn antigens.
TextSentencer_T2 182-324 Sentence denotes The sialyl-Tn (sTn) antigen is a well known cancer-associated antigen, the expression of which is related to the prognosis of cancer patients.
TextSentencer_T3 325-482 Sentence denotes We aimed to isolate a human gene encoding an N -acetylgalactosamine alpha2,6-sialyltransferase which synthesizes sTn antigen, and to characterize the enzyme.
TextSentencer_T4 483-798 Sentence denotes Degenerate primers encoding sialyl motifs were used for the polymerase chain reaction to amplify complementary DNAs prepared from RNAs of human pyloric mucosae with intestinal metaplasia, which abundantly expressed sTn antigen, followed by screening of full-length cDNAs using the amplified DNA fragment as a probe.
TextSentencer_T5 799-885 Sentence denotes We isolated two human cDNA clones, long-form (2.46 kb) and short-form (2.23 kb) cDNAs.
TextSentencer_T6 886-963 Sentence denotes The former encodes an active enzyme with a predicted 600 amino acid sequence.
TextSentencer_T7 964-1038 Sentence denotes The latter, a splice-variant of the long-form, encodes an inactive enzyme.
TextSentencer_T8 1039-1149 Sentence denotes HCT15 human colorectal cancer cells stably expressing the long-form cDNA expressed sTn epitopes on O -glycans.
TextSentencer_T9 1150-1574 Sentence denotes The long form cDNA was considered to encode a human homologue of chick ST6GalNAc I for the following reasons: (1) the putative amino acid sequence showed greater homology to that of chick ST6GalNAc I (55%) compared to other sialyltransferases, (2) it encodes the extraordinarily long stem region that is a typical feature of chick ST6GalNAc I, and (3) the substrate specificity was very similar to that of chick ST6GalNAc I.
TextSentencer_T10 1575-1762 Sentence denotes In situ hybridization demonstrated that the localization of transcripts correlated well with that of sTn antigen in gastric cancer cells and Goblet cells in intestinal metaplastic glands.
TextSentencer_T11 1763-1898 Sentence denotes Thus, we determined that the long-form cDNA of the human ST6GalNAc I gene encodes the probable candidate for the human sTn synthase(s).
T1 0-181 Sentence denotes Cloning and expression of a human gene encoding an N-acetylgalactosamine-alpha2,6-sialyltransferase (ST6GalNAc I): a candidate for synthesis of cancer-associated sialyl-Tn antigens.
T2 182-324 Sentence denotes The sialyl-Tn (sTn) antigen is a well known cancer-associated antigen, the expression of which is related to the prognosis of cancer patients.
T3 325-482 Sentence denotes We aimed to isolate a human gene encoding an N -acetylgalactosamine alpha2,6-sialyltransferase which synthesizes sTn antigen, and to characterize the enzyme.
T4 483-798 Sentence denotes Degenerate primers encoding sialyl motifs were used for the polymerase chain reaction to amplify complementary DNAs prepared from RNAs of human pyloric mucosae with intestinal metaplasia, which abundantly expressed sTn antigen, followed by screening of full-length cDNAs using the amplified DNA fragment as a probe.
T5 799-885 Sentence denotes We isolated two human cDNA clones, long-form (2.46 kb) and short-form (2.23 kb) cDNAs.
T6 886-963 Sentence denotes The former encodes an active enzyme with a predicted 600 amino acid sequence.
T7 964-1038 Sentence denotes The latter, a splice-variant of the long-form, encodes an inactive enzyme.
T8 1039-1149 Sentence denotes HCT15 human colorectal cancer cells stably expressing the long-form cDNA expressed sTn epitopes on O -glycans.
T9 1150-1762 Sentence denotes The long form cDNA was considered to encode a human homologue of chick ST6GalNAc I for the following reasons: (1) the putative amino acid sequence showed greater homology to that of chick ST6GalNAc I (55%) compared to other sialyltransferases, (2) it encodes the extraordinarily long stem region that is a typical feature of chick ST6GalNAc I, and (3) the substrate specificity was very similar to that of chick ST6GalNAc I. In situ hybridization demonstrated that the localization of transcripts correlated well with that of sTn antigen in gastric cancer cells and Goblet cells in intestinal metaplastic glands.
T10 1763-1898 Sentence denotes Thus, we determined that the long-form cDNA of the human ST6GalNAc I gene encodes the probable candidate for the human sTn synthase(s).
T1 0-181 Sentence denotes Cloning and expression of a human gene encoding an N-acetylgalactosamine-alpha2,6-sialyltransferase (ST6GalNAc I): a candidate for synthesis of cancer-associated sialyl-Tn antigens.
T2 182-324 Sentence denotes The sialyl-Tn (sTn) antigen is a well known cancer-associated antigen, the expression of which is related to the prognosis of cancer patients.
T3 325-482 Sentence denotes We aimed to isolate a human gene encoding an N -acetylgalactosamine alpha2,6-sialyltransferase which synthesizes sTn antigen, and to characterize the enzyme.
T4 483-798 Sentence denotes Degenerate primers encoding sialyl motifs were used for the polymerase chain reaction to amplify complementary DNAs prepared from RNAs of human pyloric mucosae with intestinal metaplasia, which abundantly expressed sTn antigen, followed by screening of full-length cDNAs using the amplified DNA fragment as a probe.
T5 799-885 Sentence denotes We isolated two human cDNA clones, long-form (2.46 kb) and short-form (2.23 kb) cDNAs.
T6 886-963 Sentence denotes The former encodes an active enzyme with a predicted 600 amino acid sequence.
T7 964-1038 Sentence denotes The latter, a splice-variant of the long-form, encodes an inactive enzyme.
T8 1039-1149 Sentence denotes HCT15 human colorectal cancer cells stably expressing the long-form cDNA expressed sTn epitopes on O -glycans.
T9 1150-1574 Sentence denotes The long form cDNA was considered to encode a human homologue of chick ST6GalNAc I for the following reasons: (1) the putative amino acid sequence showed greater homology to that of chick ST6GalNAc I (55%) compared to other sialyltransferases, (2) it encodes the extraordinarily long stem region that is a typical feature of chick ST6GalNAc I, and (3) the substrate specificity was very similar to that of chick ST6GalNAc I.
T10 1575-1762 Sentence denotes In situ hybridization demonstrated that the localization of transcripts correlated well with that of sTn antigen in gastric cancer cells and Goblet cells in intestinal metaplastic glands.
T11 1763-1898 Sentence denotes Thus, we determined that the long-form cDNA of the human ST6GalNAc I gene encodes the probable candidate for the human sTn synthase(s).

GO-BP

Id Subject Object Predicate Lexical cue
T1 131-140 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T2 162-168 http://purl.obolibrary.org/obo/GO_0097503 denotes sialyl
T3 186-192 http://purl.obolibrary.org/obo/GO_0097503 denotes sialyl
T4 511-517 http://purl.obolibrary.org/obo/GO_0097503 denotes sialyl
T5 659-669 http://purl.obolibrary.org/obo/GO_0036074 denotes metaplasia
T6 774-786 http://purl.obolibrary.org/obo/GO_0006309 denotes DNA fragment
T7 908-921 http://purl.obolibrary.org/obo/GO_0003824 denotes active enzyme
T8 978-984 http://purl.obolibrary.org/obo/GO_0045292 denotes splice
T9 1619-1631 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T10 1635-1646 http://purl.obolibrary.org/obo/GO_0006351 denotes transcripts

GO-CC

Id Subject Object Predicate Lexical cue
T1 1069-1074 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T2 1706-1711 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T3 1723-1728 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 635-642 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosae
T2 648-658 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
T3 1732-1742 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
T4 1755-1761 http://purl.obolibrary.org/obo/UBERON_0002530 denotes glands

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 28-33 http://edamontology.org/topic_2815 denotes human
T2 28-38 http://edamontology.org/topic_3574 denotes human gene
T3 144-150 http://edamontology.org/topic_2640 denotes cancer
T4 172-180 http://edamontology.org/topic_2830 denotes antigens
T5 202-209 http://edamontology.org/topic_2830 denotes antigen
T6 226-232 http://edamontology.org/topic_2640 denotes cancer
T7 244-251 http://edamontology.org/topic_2830 denotes antigen
T8 308-314 http://edamontology.org/topic_2640 denotes cancer
T9 347-352 http://edamontology.org/topic_2815 denotes human
T10 347-357 http://edamontology.org/topic_3574 denotes human gene
T11 442-449 http://edamontology.org/topic_2830 denotes antigen
T12 494-501 http://edamontology.org/topic_0922 denotes primers
T13 494-501 http://edamontology.org/topic_0632 denotes primers
T14 518-524 http://edamontology.org/topic_0158 denotes motifs
T15 543-568 http://edamontology.org/topic_0195 denotes polymerase chain reaction
T16 594-598 http://edamontology.org/topic_0654 denotes DNAs
T17 613-617 http://edamontology.org/topic_0099 denotes RNAs
T18 621-626 http://edamontology.org/topic_2815 denotes human
T19 702-709 http://edamontology.org/topic_2830 denotes antigen
T20 748-753 http://edamontology.org/topic_3512 denotes cDNAs
T21 792-797 http://edamontology.org/topic_0632 denotes probe
T22 815-820 http://edamontology.org/topic_2815 denotes human
T23 821-825 http://edamontology.org/topic_3512 denotes cDNA
T24 879-884 http://edamontology.org/topic_3512 denotes cDNAs
T25 943-953 http://edamontology.org/topic_0154 denotes amino acid
T26 954-962 http://edamontology.org/topic_3168 denotes sequence
T27 954-962 http://edamontology.org/topic_0080 denotes sequence
T28 1045-1050 http://edamontology.org/topic_2815 denotes human
T29 1062-1068 http://edamontology.org/topic_2640 denotes cancer
T30 1107-1111 http://edamontology.org/topic_3512 denotes cDNA
T31 1164-1168 http://edamontology.org/topic_3512 denotes cDNA
T32 1196-1201 http://edamontology.org/topic_2815 denotes human
T33 1277-1287 http://edamontology.org/topic_0154 denotes amino acid
T34 1288-1296 http://edamontology.org/topic_3168 denotes sequence
T35 1288-1296 http://edamontology.org/topic_0080 denotes sequence
T36 1635-1646 http://edamontology.org/topic_0110 denotes transcripts
T37 1635-1646 http://edamontology.org/topic_3512 denotes transcripts
T38 1635-1646 http://edamontology.org/topic_3308 denotes transcripts
T39 1635-1646 http://edamontology.org/topic_0203 denotes transcripts
T40 1680-1687 http://edamontology.org/topic_2830 denotes antigen
T41 1699-1705 http://edamontology.org/topic_2640 denotes cancer
T42 1802-1806 http://edamontology.org/topic_3512 denotes cDNA
T43 1814-1819 http://edamontology.org/topic_2815 denotes human
T44 1849-1857 http://edamontology.org/topic_2269 denotes probable
T45 1876-1881 http://edamontology.org/topic_2815 denotes human

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 594-598 http://edamontology.org/format_1212 denotes DNAs
T2 613-617 http://edamontology.org/format_1213 denotes RNAs
T3 929-938 http://edamontology.org/operation_2423 denotes predicted
T4 954-962 http://edamontology.org/data_2044 denotes sequence
T5 954-962 http://edamontology.org/operation_3218 denotes sequence
T6 1288-1296 http://edamontology.org/data_2044 denotes sequence
T7 1288-1296 http://edamontology.org/operation_3218 denotes sequence
T8 1464-1471 http://edamontology.org/data_1255 denotes feature
T9 1597-1609 http://edamontology.org/operation_2246 denotes demonstrated
T10 1647-1657 http://edamontology.org/operation_3465 denotes correlated

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 101-112 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
PD-GlycoGenes20190927-B_T2 1221-1232 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
PD-GlycoGenes20190927-B_T3 1338-1349 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
PD-GlycoGenes20190927-B_T4 1481-1492 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
PD-GlycoGenes20190927-B_T5 1562-1573 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I
PD-GlycoGenes20190927-B_T6 1820-1831 https://acgg.asia/db/ggdb/info/gg056 denotes ST6GalNAc I

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 648-658 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T2 968-974 http://purl.obolibrary.org/obo/MAT_0000488 denotes latter
T3 1434-1438 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T4 1732-1742 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T5 1755-1761 http://purl.obolibrary.org/obo/MAT_0000021 denotes glands

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 635-642 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosae
PD-UBERON-AE-B_T2 648-658 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
PD-UBERON-AE-B_T3 1732-1742 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
PD-UBERON-AE-B_T4 1755-1761 http://purl.obolibrary.org/obo/UBERON_0002530 denotes glands

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 169-171 https://acgg.asia/db/lfdb/LfDB0021 denotes Tn
Lectin_T2 193-195 https://acgg.asia/db/lfdb/LfDB0021 denotes Tn

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 169-180 http://www.glycoepitope.jp/epitopes/EP0021 denotes Tn antigens
PD-GlycoEpitope-B_T2 162-180 http://www.glycoepitope.jp/epitopes/EP0022 denotes sialyl-Tn antigens

DisGeNET

Id Subject Object Predicate Lexical cue
T0 101-112 gene:55808 denotes ST6GalNAc I
T1 144-150 disease:C0006826 denotes cancer
T2 101-112 gene:55808 denotes ST6GalNAc I
T3 144-150 disease:C1306459 denotes cancer
R1 T0 T1 associated_with ST6GalNAc I,cancer
R2 T2 T3 associated_with ST6GalNAc I,cancer

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 648-658 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043
T2 1434-1438 Body_part denotes stem http://purl.obolibrary.org/obo/MAT_0000239
T3 1732-1742 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043
T4 1755-1761 Body_part denotes glands http://purl.obolibrary.org/obo/MAT_0000021

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 144-150 Phenotype denotes cancer HP:0002664
T2 226-232 Phenotype denotes cancer HP:0002664
T3 308-314 Phenotype denotes cancer HP:0002664
T4 1051-1068 Phenotype denotes colorectal cancer HP:0003003
T5 1691-1705 Phenotype denotes gastric cancer HP:0012126

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 144-150 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T2 226-232 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T3 308-314 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T4 1051-1068 Disease denotes colorectal cancer http://purl.obolibrary.org/obo/MONDO_0005575
T5 1691-1705 Disease denotes gastric cancer http://purl.obolibrary.org/obo/MONDO_0001056

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 28-33 OrganismTaxon denotes human 9606
T2 347-352 OrganismTaxon denotes human 9606
T3 621-626 OrganismTaxon denotes human 9606
T4 815-820 OrganismTaxon denotes human 9606
T5 1045-1050 OrganismTaxon denotes human 9606
T6 1196-1201 OrganismTaxon denotes human 9606
T7 1814-1819 OrganismTaxon denotes human 9606
T8 1876-1881 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1716-1728 Body_part denotes Goblet cells http://purl.obolibrary.org/obo/CL_0000160

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 1062-1074 Cell denotes cancer cells http://purl.obolibrary.org/obo/CL:0001064
T2 1699-1711 Cell denotes cancer cells http://purl.obolibrary.org/obo/CL:0001064
T3 1716-1728 Cell denotes Goblet cells http://purl.obolibrary.org/obo/CL:0000160