PubMed:10438731 JSONTXT

Annnotations TAB JSON ListView MergeView

    jnlpba-st-training

    {"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":9},"obj":"protein"},{"id":"T2","span":{"begin":14,"end":20},"obj":"protein"},{"id":"T3","span":{"begin":62,"end":109},"obj":"DNA"},{"id":"T4","span":{"begin":127,"end":136},"obj":"protein"},{"id":"T5","span":{"begin":177,"end":215},"obj":"protein"},{"id":"T6","span":{"begin":217,"end":220},"obj":"protein"},{"id":"T7","span":{"begin":250,"end":261},"obj":"cell_type"},{"id":"T8","span":{"begin":266,"end":275},"obj":"cell_type"},{"id":"T9","span":{"begin":279,"end":298},"obj":"cell_type"},{"id":"T10","span":{"begin":376,"end":382},"obj":"protein"},{"id":"T11","span":{"begin":418,"end":424},"obj":"protein"},{"id":"T12","span":{"begin":428,"end":431},"obj":"protein"},{"id":"T13","span":{"begin":476,"end":495},"obj":"DNA"},{"id":"T14","span":{"begin":509,"end":570},"obj":"DNA"},{"id":"T15","span":{"begin":603,"end":620},"obj":"DNA"},{"id":"T16","span":{"begin":628,"end":636},"obj":"DNA"},{"id":"T17","span":{"begin":645,"end":660},"obj":"cell_line"},{"id":"T18","span":{"begin":715,"end":725},"obj":"cell_type"},{"id":"T19","span":{"begin":785,"end":800},"obj":"RNA"},{"id":"T20","span":{"begin":908,"end":917},"obj":"protein"},{"id":"T21","span":{"begin":1023,"end":1032},"obj":"protein"},{"id":"T22","span":{"begin":1069,"end":1087},"obj":"DNA"},{"id":"T23","span":{"begin":1089,"end":1102},"obj":"DNA"},{"id":"T24","span":{"begin":1111,"end":1114},"obj":"protein"},{"id":"T25","span":{"begin":1169,"end":1178},"obj":"protein"},{"id":"T26","span":{"begin":1183,"end":1189},"obj":"protein"},{"id":"T27","span":{"begin":1232,"end":1250},"obj":"DNA"},{"id":"T28","span":{"begin":1258,"end":1270},"obj":"DNA"},{"id":"T29","span":{"begin":1315,"end":1344},"obj":"DNA"},{"id":"T30","span":{"begin":1366,"end":1375},"obj":"protein"},{"id":"T31","span":{"begin":1380,"end":1386},"obj":"protein"},{"id":"T32","span":{"begin":1405,"end":1417},"obj":"DNA"},{"id":"T33","span":{"begin":1425,"end":1473},"obj":"cell_line"},{"id":"T34","span":{"begin":1495,"end":1534},"obj":"DNA"},{"id":"T35","span":{"begin":1600,"end":1609},"obj":"protein"},{"id":"T36","span":{"begin":1613,"end":1638},"obj":"DNA"},{"id":"T37","span":{"begin":1666,"end":1669},"obj":"protein"},{"id":"T38","span":{"begin":1742,"end":1748},"obj":"protein"},{"id":"T39","span":{"begin":1753,"end":1762},"obj":"protein"},{"id":"T40","span":{"begin":1778,"end":1781},"obj":"protein"},{"id":"T41","span":{"begin":1783,"end":1792},"obj":"protein"},{"id":"T42","span":{"begin":1810,"end":1816},"obj":"protein"},{"id":"T43","span":{"begin":1844,"end":1865},"obj":"protein"},{"id":"T44","span":{"begin":1905,"end":1911},"obj":"protein"},{"id":"T45","span":{"begin":1920,"end":1932},"obj":"DNA"},{"id":"T46","span":{"begin":2010,"end":2016},"obj":"protein"},{"id":"T47","span":{"begin":2021,"end":2030},"obj":"protein"},{"id":"T48","span":{"begin":2065,"end":2073},"obj":"DNA"},{"id":"T49","span":{"begin":2080,"end":2120},"obj":"DNA"},{"id":"T50","span":{"begin":2130,"end":2133},"obj":"protein"},{"id":"T51","span":{"begin":2173,"end":2191},"obj":"cell_type"},{"id":"T52","span":{"begin":2243,"end":2279},"obj":"cell_type"}],"text":"C/EBPbeta and GATA-1 synergistically regulate activity of the eosinophil granule major basic protein promoter: implication for C/EBPbeta activity in eosinophil gene expression.\nEosinophil granule major basic protein (MBP) is expressed exclusively in eosinophils and basophils in hematopoietic cells. In our previous study, we demonstrated a major positive regulatory role for GATA-1 and a negative regulatory role for GATA-2 in MBP gene transcription. Further analysis of the MBP promoter region identified a C/EBP (CCAAT/enhancer-binding protein) consensus binding site 6 bp upstream of the functional GATA-binding site in the MBP gene. In the cell line HT93A, which is capable of differentiating towards both the eosinophil and neutrophil lineages in response to retinoic acid (RA), C/EBPalpha mRNA expression decreased significantly concomitant with eosinophilic and neutrophilic differentiation, whereas C/EBPbeta expression was markedly increased. Electrophoretic mobility shift assays (EMSAs) showed that recombinant C/EBPbeta protein could bind to the potential C/EBP-binding site (bp -90 to -82) in the MBP promoter. Furthermore, we have demonstrated that both C/EBPbeta and GATA-1 can bind simultaneously to the C/EBP- and GATA-binding sites in the MBP promoter. To determine the functionality of both the C/EBP- and GATA-binding sites, we analyzed whether C/EBPbeta and GATA-1 can stimulate the MBP promoter in the C/EBPbeta and GATA-1 negative Jurkat T-cell line. Cotransfection with C/EBPbeta and GATA-1 expression vectors produced a 5-fold increase compared with cotransfection with the C/EBPbeta or GATA-1 expression vectors individually. In addition, GST pull-down experiments demonstrated a physical interaction between human GATA-1 and C/EBPbeta. Expression of FOG (riend ATA), which binds to GATA-1 and acts as a cofactor for GATA-binding proteins, decreased transactivation activity of GATA-1 for the MBP promoter in a dose-dependent manner. Our results provide the first evidence that both GATA-1 and C/EBPbeta synergistically transactivate the promoter of an eosinophil-specific granule protein gene and that FOG may act as a negative cofactor for the eosinophil lineage, unlike its positively regulatory function for the erythroid and megakaryocyte lineages."}

    genia-medco-coref

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In our previous study, we demonstrated a major positive regulatory role for GATA-1 and a negative regulatory role for GATA-2 in MBP gene transcription. Further analysis of the MBP promoter region identified a C/EBP (CCAAT/enhancer-binding protein) consensus binding site 6 bp upstream of the functional GATA-binding site in the MBP gene. In the cell line HT93A, which is capable of differentiating towards both the eosinophil and neutrophil lineages in response to retinoic acid (RA), C/EBPalpha mRNA expression decreased significantly concomitant with eosinophilic and neutrophilic differentiation, whereas C/EBPbeta expression was markedly increased. Electrophoretic mobility shift assays (EMSAs) showed that recombinant C/EBPbeta protein could bind to the potential C/EBP-binding site (bp -90 to -82) in the MBP promoter. Furthermore, we have demonstrated that both C/EBPbeta and GATA-1 can bind simultaneously to the C/EBP- and GATA-binding sites in the MBP promoter. To determine the functionality of both the C/EBP- and GATA-binding sites, we analyzed whether C/EBPbeta and GATA-1 can stimulate the MBP promoter in the C/EBPbeta and GATA-1 negative Jurkat T-cell line. Cotransfection with C/EBPbeta and GATA-1 expression vectors produced a 5-fold increase compared with cotransfection with the C/EBPbeta or GATA-1 expression vectors individually. In addition, GST pull-down experiments demonstrated a physical interaction between human GATA-1 and C/EBPbeta. Expression of FOG (riend ATA), which binds to GATA-1 and acts as a cofactor for GATA-binding proteins, decreased transactivation activity of GATA-1 for the MBP promoter in a dose-dependent manner. Our results provide the first evidence that both GATA-1 and C/EBPbeta synergistically transactivate the promoter of an eosinophil-specific granule protein gene and that FOG may act as a negative cofactor for the eosinophil lineage, unlike its positively regulatory function for the erythroid and megakaryocyte lineages."}

    semrep-sample

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and GATA-1 synergistically regulate activity of the eosinophil granule major basic protein promoter: implication for C/EBPbeta activity in eosinophil gene expression.\nEosinophil granule major basic protein (MBP) is expressed exclusively in eosinophils and basophils in hematopoietic cells. In our previous study, we demonstrated a major positive regulatory role for GATA-1 and a negative regulatory role for GATA-2 in MBP gene transcription. Further analysis of the MBP promoter region identified a C/EBP (CCAAT/enhancer-binding protein) consensus binding site 6 bp upstream of the functional GATA-binding site in the MBP gene. In the cell line HT93A, which is capable of differentiating towards both the eosinophil and neutrophil lineages in response to retinoic acid (RA), C/EBPalpha mRNA expression decreased significantly concomitant with eosinophilic and neutrophilic differentiation, whereas C/EBPbeta expression was markedly increased. Electrophoretic mobility shift assays (EMSAs) showed that recombinant C/EBPbeta protein could bind to the potential C/EBP-binding site (bp -90 to -82) in the MBP promoter. Furthermore, we have demonstrated that both C/EBPbeta and GATA-1 can bind simultaneously to the C/EBP- and GATA-binding sites in the MBP promoter. To determine the functionality of both the C/EBP- and GATA-binding sites, we analyzed whether C/EBPbeta and GATA-1 can stimulate the MBP promoter in the C/EBPbeta and GATA-1 negative Jurkat T-cell line. Cotransfection with C/EBPbeta and GATA-1 expression vectors produced a 5-fold increase compared with cotransfection with the C/EBPbeta or GATA-1 expression vectors individually. In addition, GST pull-down experiments demonstrated a physical interaction between human GATA-1 and C/EBPbeta. Expression of FOG (riend ATA), which binds to GATA-1 and acts as a cofactor for GATA-binding proteins, decreased transactivation activity of GATA-1 for the MBP promoter in a dose-dependent manner. Our results provide the first evidence that both GATA-1 and C/EBPbeta synergistically transactivate the promoter of an eosinophil-specific granule protein gene and that FOG may act as a negative cofactor for the eosinophil lineage, unlike its positively regulatory function for the erythroid and megakaryocyte lineages."}

    pubmed-sentences-benchmark

    {"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"S2","span":{"begin":177,"end":299},"obj":"Sentence"},{"id":"S3","span":{"begin":300,"end":451},"obj":"Sentence"},{"id":"S4","span":{"begin":452,"end":637},"obj":"Sentence"},{"id":"S5","span":{"begin":638,"end":952},"obj":"Sentence"},{"id":"S6","span":{"begin":953,"end":1124},"obj":"Sentence"},{"id":"S7","span":{"begin":1125,"end":1271},"obj":"Sentence"},{"id":"S8","span":{"begin":1272,"end":1474},"obj":"Sentence"},{"id":"S9","span":{"begin":1475,"end":1652},"obj":"Sentence"},{"id":"S10","span":{"begin":1653,"end":1763},"obj":"Sentence"},{"id":"S11","span":{"begin":1764,"end":1960},"obj":"Sentence"},{"id":"S12","span":{"begin":1961,"end":2280},"obj":"Sentence"}],"text":"C/EBPbeta and GATA-1 synergistically regulate activity of the eosinophil granule major basic protein promoter: implication for C/EBPbeta activity in eosinophil gene expression.\nEosinophil granule major basic protein (MBP) is expressed exclusively in eosinophils and basophils in hematopoietic cells. In our previous study, we demonstrated a major positive regulatory role for GATA-1 and a negative regulatory role for GATA-2 in MBP gene transcription. Further analysis of the MBP promoter region identified a C/EBP (CCAAT/enhancer-binding protein) consensus binding site 6 bp upstream of the functional GATA-binding site in the MBP gene. In the cell line HT93A, which is capable of differentiating towards both the eosinophil and neutrophil lineages in response to retinoic acid (RA), C/EBPalpha mRNA expression decreased significantly concomitant with eosinophilic and neutrophilic differentiation, whereas C/EBPbeta expression was markedly increased. Electrophoretic mobility shift assays (EMSAs) showed that recombinant C/EBPbeta protein could bind to the potential C/EBP-binding site (bp -90 to -82) in the MBP promoter. Furthermore, we have demonstrated that both C/EBPbeta and GATA-1 can bind simultaneously to the C/EBP- and GATA-binding sites in the MBP promoter. To determine the functionality of both the C/EBP- and GATA-binding sites, we analyzed whether C/EBPbeta and GATA-1 can stimulate the MBP promoter in the C/EBPbeta and GATA-1 negative Jurkat T-cell line. Cotransfection with C/EBPbeta and GATA-1 expression vectors produced a 5-fold increase compared with cotransfection with the C/EBPbeta or GATA-1 expression vectors individually. In addition, GST pull-down experiments demonstrated a physical interaction between human GATA-1 and C/EBPbeta. Expression of FOG (riend ATA), which binds to GATA-1 and acts as a cofactor for GATA-binding proteins, decreased transactivation activity of GATA-1 for the MBP promoter in a dose-dependent manner. Our results provide the first evidence that both GATA-1 and C/EBPbeta synergistically transactivate the promoter of an eosinophil-specific granule protein gene and that FOG may act as a negative cofactor for the eosinophil lineage, unlike its positively regulatory function for the erythroid and megakaryocyte lineages."}

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