PubMed:10430908
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/10430908","sourcedb":"PubMed","sourceid":"10430908","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/10430908","text":"NF-kappaB-mediated up-regulation of Bcl-x and Bfl-1/A1 is required for CD40 survival signaling in B lymphocytes.\nActivation of CD40 is essential for thymus-dependent humoral immune responses and rescuing B cells from apoptosis. Many of the effects of CD40 are believed to be achieved through altered gene expression. In addition to Bcl-x, a known CD40-regulated antiapoptotic molecule, we identified a related antiapoptotic molecule, A1/Bfl-1, as a CD40-inducible gene. Inhibition of the NF-kappaB pathway by overexpression of a dominant-active inhibitor of NF-kappaB abolished CD40-induced up-regulation of both the Bfl-1 and Bcl-x genes and also eliminated the ability of CD40 to rescue Fas-induced cell death. Within the upstream promoter region of Bcl-x, a potential NF-kappaB-binding sequence was found to support NF-kappaB-dependent transcriptional activation. Furthermore, expression of physiological levels of Bcl-x protected B cells from Fas-mediated apoptosis in the absence of NF-kappaB signaling. Thus, our results suggest that CD40-mediated cell survival proceeds through NF-kappaB-dependent up-regulation of Bcl-2 family members.","tracks":[{"project":"genia-medco-coref","denotations":[{"id":"C20","span":{"begin":918,"end":923},"obj":"NP"},{"id":"C21","span":{"begin":934,"end":941},"obj":"NP"},{"id":"C23","span":{"begin":947,"end":951},"obj":"NP"},{"id":"C13","span":{"begin":0,"end":10},"obj":"NP"},{"id":"C9","span":{"begin":36,"end":41},"obj":"NP"},{"id":"C11","span":{"begin":46,"end":54},"obj":"NP"},{"id":"C1","span":{"begin":98,"end":111},"obj":"NP"},{"id":"C3","span":{"begin":127,"end":131},"obj":"NP"},{"id":"C2","span":{"begin":204,"end":211},"obj":"NP"},{"id":"C4","span":{"begin":251,"end":255},"obj":"NP"},{"id":"C10","span":{"begin":332,"end":337},"obj":"NP"},{"id":"C5","span":{"begin":347,"end":352},"obj":"NP"},{"id":"C7","span":{"begin":400,"end":432},"obj":"NP"},{"id":"C8","span":{"begin":434,"end":442},"obj":"NP"},{"id":"C6","span":{"begin":449,"end":454},"obj":"NP"},{"id":"C12","span":{"begin":558,"end":567},"obj":"NP"},{"id":"C14","span":{"begin":578,"end":583},"obj":"NP"},{"id":"C16","span":{"begin":674,"end":678},"obj":"NP"},{"id":"C22","span":{"begin":689,"end":693},"obj":"NP"},{"id":"C17","span":{"begin":752,"end":757},"obj":"NP"},{"id":"C18","span":{"begin":771,"end":781},"obj":"NP"},{"id":"C19","span":{"begin":819,"end":829},"obj":"NP"},{"id":"C24","span":{"begin":1040,"end":1045},"obj":"NP"},{"id":"C25","span":{"begin":1085,"end":1095},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-ident","subj":"C2","obj":"C1"},{"id":"R2","pred":"coref-ident","subj":"C4","obj":"C3"},{"id":"R3","pred":"coref-ident","subj":"C10","obj":"C9"},{"id":"R4","pred":"coref-ident","subj":"C5","obj":"C4"},{"id":"R5","pred":"coref-ident","subj":"C7","obj":"C11"},{"id":"R6","pred":"coref-appos","subj":"C8","obj":"C7"},{"id":"R7","pred":"coref-ident","subj":"C6","obj":"C5"},{"id":"R8","pred":"coref-ident","subj":"C12","obj":"C13"},{"id":"R9","pred":"coref-ident","subj":"C14","obj":"C6"},{"id":"R10","pred":"coref-ident","subj":"C16","obj":"C14"},{"id":"R11","pred":"coref-ident","subj":"C17","obj":"C10"},{"id":"R12","pred":"coref-ident","subj":"C18","obj":"C12"},{"id":"R13","pred":"coref-ident","subj":"C19","obj":"C18"},{"id":"R14","pred":"coref-ident","subj":"C20","obj":"C17"},{"id":"R15","pred":"coref-ident","subj":"C21","obj":"C2"},{"id":"R16","pred":"coref-ident","subj":"C23","obj":"C22"},{"id":"R17","pred":"coref-ident","subj":"C24","obj":"C16"},{"id":"R18","pred":"coref-ident","subj":"C25","obj":"C19"}],"attributes":[{"subj":"C20","pred":"source","obj":"genia-medco-coref"},{"subj":"C21","pred":"source","obj":"genia-medco-coref"},{"subj":"C23","pred":"source","obj":"genia-medco-coref"},{"subj":"C13","pred":"source","obj":"genia-medco-coref"},{"subj":"C9","pred":"source","obj":"genia-medco-coref"},{"subj":"C11","pred":"source","obj":"genia-medco-coref"},{"subj":"C1","pred":"source","obj":"genia-medco-coref"},{"subj":"C3","pred":"source","obj":"genia-medco-coref"},{"subj":"C2","pred":"source","obj":"genia-medco-coref"},{"subj":"C4","pred":"source","obj":"genia-medco-coref"},{"subj":"C10","pred":"source","obj":"genia-medco-coref"},{"subj":"C5","pred":"source","obj":"genia-medco-coref"},{"subj":"C7","pred":"source","obj":"genia-medco-coref"},{"subj":"C8","pred":"source","obj":"genia-medco-coref"},{"subj":"C6","pred":"source","obj":"genia-medco-coref"},{"subj":"C12","pred":"source","obj":"genia-medco-coref"},{"subj":"C14","pred":"source","obj":"genia-medco-coref"},{"subj":"C16","pred":"source","obj":"genia-medco-coref"},{"subj":"C22","pred":"source","obj":"genia-medco-coref"},{"subj":"C17","pred":"source","obj":"genia-medco-coref"},{"subj":"C18","pred":"source","obj":"genia-medco-coref"},{"subj":"C19","pred":"source","obj":"genia-medco-coref"},{"subj":"C24","pred":"source","obj":"genia-medco-coref"},{"subj":"C25","pred":"source","obj":"genia-medco-coref"}]},{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":0,"end":32},"obj":"cell_type"},{"id":"T2","span":{"begin":36,"end":41},"obj":"protein"},{"id":"T3","span":{"begin":46,"end":54},"obj":"protein"},{"id":"T4","span":{"begin":71,"end":75},"obj":"protein"},{"id":"T5","span":{"begin":98,"end":111},"obj":"cell_type"},{"id":"T6","span":{"begin":127,"end":131},"obj":"protein"},{"id":"T7","span":{"begin":204,"end":211},"obj":"cell_type"},{"id":"T8","span":{"begin":251,"end":255},"obj":"protein"},{"id":"T9","span":{"begin":332,"end":337},"obj":"protein"},{"id":"T10","span":{"begin":347,"end":384},"obj":"protein"},{"id":"T11","span":{"begin":410,"end":432},"obj":"protein"},{"id":"T12","span":{"begin":434,"end":442},"obj":"protein"},{"id":"T13","span":{"begin":449,"end":468},"obj":"DNA"},{"id":"T14","span":{"begin":488,"end":497},"obj":"protein"},{"id":"T15","span":{"begin":558,"end":567},"obj":"protein"},{"id":"T16","span":{"begin":578,"end":582},"obj":"protein"},{"id":"T17","span":{"begin":617,"end":622},"obj":"protein"},{"id":"T18","span":{"begin":627,"end":632},"obj":"protein"},{"id":"T19","span":{"begin":674,"end":678},"obj":"protein"},{"id":"T20","span":{"begin":689,"end":692},"obj":"protein"},{"id":"T21","span":{"begin":724,"end":748},"obj":"DNA"},{"id":"T22","span":{"begin":752,"end":757},"obj":"protein"},{"id":"T23","span":{"begin":771,"end":797},"obj":"DNA"},{"id":"T24","span":{"begin":819,"end":828},"obj":"protein"},{"id":"T25","span":{"begin":918,"end":941},"obj":"cell_type"},{"id":"T26","span":{"begin":988,"end":997},"obj":"protein"},{"id":"T27","span":{"begin":1040,"end":1044},"obj":"protein"},{"id":"T28","span":{"begin":1085,"end":1094},"obj":"protein"},{"id":"T29","span":{"begin":1122,"end":1142},"obj":"protein"}],"attributes":[{"subj":"T1","pred":"source","obj":"jnlpba-st-training"},{"subj":"T2","pred":"source","obj":"jnlpba-st-training"},{"subj":"T3","pred":"source","obj":"jnlpba-st-training"},{"subj":"T4","pred":"source","obj":"jnlpba-st-training"},{"subj":"T5","pred":"source","obj":"jnlpba-st-training"},{"subj":"T6","pred":"source","obj":"jnlpba-st-training"},{"subj":"T7","pred":"source","obj":"jnlpba-st-training"},{"subj":"T8","pred":"source","obj":"jnlpba-st-training"},{"subj":"T9","pred":"source","obj":"jnlpba-st-training"},{"subj":"T10","pred":"source","obj":"jnlpba-st-training"},{"subj":"T11","pred":"source","obj":"jnlpba-st-training"},{"subj":"T12","pred":"source","obj":"jnlpba-st-training"},{"subj":"T13","pred":"source","obj":"jnlpba-st-training"},{"subj":"T14","pred":"source","obj":"jnlpba-st-training"},{"subj":"T15","pred":"source","obj":"jnlpba-st-training"},{"subj":"T16","pred":"source","obj":"jnlpba-st-training"},{"subj":"T17","pred":"source","obj":"jnlpba-st-training"},{"subj":"T18","pred":"source","obj":"jnlpba-st-training"},{"subj":"T19","pred":"source","obj":"jnlpba-st-training"},{"subj":"T20","pred":"source","obj":"jnlpba-st-training"},{"subj":"T21","pred":"source","obj":"jnlpba-st-training"},{"subj":"T22","pred":"source","obj":"jnlpba-st-training"},{"subj":"T23","pred":"source","obj":"jnlpba-st-training"},{"subj":"T24","pred":"source","obj":"jnlpba-st-training"},{"subj":"T25","pred":"source","obj":"jnlpba-st-training"},{"subj":"T26","pred":"source","obj":"jnlpba-st-training"},{"subj":"T27","pred":"source","obj":"jnlpba-st-training"},{"subj":"T28","pred":"source","obj":"jnlpba-st-training"},{"subj":"T29","pred":"source","obj":"jnlpba-st-training"}]},{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":112},"obj":"Sentence"},{"id":"S2","span":{"begin":113,"end":227},"obj":"Sentence"},{"id":"S3","span":{"begin":228,"end":316},"obj":"Sentence"},{"id":"S4","span":{"begin":317,"end":469},"obj":"Sentence"},{"id":"S5","span":{"begin":470,"end":712},"obj":"Sentence"},{"id":"S6","span":{"begin":713,"end":866},"obj":"Sentence"},{"id":"S7","span":{"begin":867,"end":1008},"obj":"Sentence"},{"id":"S8","span":{"begin":1009,"end":1143},"obj":"Sentence"}],"attributes":[{"subj":"S1","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S2","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S3","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S4","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S5","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S6","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S7","pred":"source","obj":"pubmed-sentences-benchmark"},{"subj":"S8","pred":"source","obj":"pubmed-sentences-benchmark"}]},{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":0,"end":9},"obj":"protein_complex"},{"id":"T2","span":{"begin":36,"end":41},"obj":"protein_molecule"},{"id":"T3","span":{"begin":46,"end":54},"obj":"protein_molecule"},{"id":"T4","span":{"begin":71,"end":75},"obj":"protein_molecule"},{"id":"T5","span":{"begin":98,"end":111},"obj":"cell_type"},{"id":"T6","span":{"begin":127,"end":131},"obj":"protein_molecule"},{"id":"T7","span":{"begin":149,"end":190},"obj":"other_name"},{"id":"T8","span":{"begin":204,"end":211},"obj":"cell_type"},{"id":"T9","span":{"begin":217,"end":226},"obj":"other_name"},{"id":"T10","span":{"begin":251,"end":255},"obj":"protein_molecule"},{"id":"T11","span":{"begin":300,"end":315},"obj":"other_name"},{"id":"T12","span":{"begin":332,"end":337},"obj":"protein_molecule"},{"id":"T13","span":{"begin":347,"end":351},"obj":"protein_molecule"},{"id":"T14","span":{"begin":410,"end":432},"obj":"protein_family_or_group"},{"id":"T15","span":{"begin":434,"end":442},"obj":"protein_molecule"},{"id":"T16","span":{"begin":449,"end":453},"obj":"protein_molecule"},{"id":"T17","span":{"begin":488,"end":497},"obj":"protein_complex"},{"id":"T18","span":{"begin":558,"end":567},"obj":"protein_complex"},{"id":"T19","span":{"begin":578,"end":582},"obj":"protein_molecule"},{"id":"T20","span":{"begin":617,"end":622},"obj":"protein_molecule"},{"id":"T21","span":{"begin":627,"end":632},"obj":"protein_molecule"},{"id":"T22","span":{"begin":674,"end":678},"obj":"protein_molecule"},{"id":"T23","span":{"begin":689,"end":692},"obj":"protein_molecule"},{"id":"T24","span":{"begin":724,"end":748},"obj":"DNA_domain_or_region"},{"id":"T25","span":{"begin":752,"end":757},"obj":"protein_molecule"},{"id":"T26","span":{"begin":771,"end":780},"obj":"protein_complex"},{"id":"T27","span":{"begin":819,"end":828},"obj":"protein_complex"},{"id":"T28","span":{"begin":918,"end":923},"obj":"protein_molecule"},{"id":"T29","span":{"begin":934,"end":941},"obj":"cell_type"},{"id":"T30","span":{"begin":960,"end":969},"obj":"other_name"},{"id":"T31","span":{"begin":988,"end":997},"obj":"protein_complex"},{"id":"T32","span":{"begin":1040,"end":1044},"obj":"protein_molecule"},{"id":"T33","span":{"begin":1085,"end":1094},"obj":"protein_complex"},{"id":"T34","span":{"begin":1122,"end":1142},"obj":"protein_family_or_group"}],"attributes":[{"subj":"T1","pred":"source","obj":"GENIAcorpus"},{"subj":"T2","pred":"source","obj":"GENIAcorpus"},{"subj":"T3","pred":"source","obj":"GENIAcorpus"},{"subj":"T4","pred":"source","obj":"GENIAcorpus"},{"subj":"T5","pred":"source","obj":"GENIAcorpus"},{"subj":"T6","pred":"source","obj":"GENIAcorpus"},{"subj":"T7","pred":"source","obj":"GENIAcorpus"},{"subj":"T8","pred":"source","obj":"GENIAcorpus"},{"subj":"T9","pred":"source","obj":"GENIAcorpus"},{"subj":"T10","pred":"source","obj":"GENIAcorpus"},{"subj":"T11","pred":"source","obj":"GENIAcorpus"},{"subj":"T12","pred":"source","obj":"GENIAcorpus"},{"subj":"T13","pred":"source","obj":"GENIAcorpus"},{"subj":"T14","pred":"source","obj":"GENIAcorpus"},{"subj":"T15","pred":"source","obj":"GENIAcorpus"},{"subj":"T16","pred":"source","obj":"GENIAcorpus"},{"subj":"T17","pred":"source","obj":"GENIAcorpus"},{"subj":"T18","pred":"source","obj":"GENIAcorpus"},{"subj":"T19","pred":"source","obj":"GENIAcorpus"},{"subj":"T20","pred":"source","obj":"GENIAcorpus"},{"subj":"T21","pred":"source","obj":"GENIAcorpus"},{"subj":"T22","pred":"source","obj":"GENIAcorpus"},{"subj":"T23","pred":"source","obj":"GENIAcorpus"},{"subj":"T24","pred":"source","obj":"GENIAcorpus"},{"subj":"T25","pred":"source","obj":"GENIAcorpus"},{"subj":"T26","pred":"source","obj":"GENIAcorpus"},{"subj":"T27","pred":"source","obj":"GENIAcorpus"},{"subj":"T28","pred":"source","obj":"GENIAcorpus"},{"subj":"T29","pred":"source","obj":"GENIAcorpus"},{"subj":"T30","pred":"source","obj":"GENIAcorpus"},{"subj":"T31","pred":"source","obj":"GENIAcorpus"},{"subj":"T32","pred":"source","obj":"GENIAcorpus"},{"subj":"T33","pred":"source","obj":"GENIAcorpus"},{"subj":"T34","pred":"source","obj":"GENIAcorpus"}]},{"project":"PMID_GLOBAL","denotations":[{"id":"T1","span":{"begin":0,"end":112},"obj":"Sentence"},{"id":"T2","span":{"begin":113,"end":227},"obj":"Sentence"},{"id":"T3","span":{"begin":228,"end":316},"obj":"Sentence"},{"id":"T4","span":{"begin":317,"end":469},"obj":"Sentence"},{"id":"T5","span":{"begin":470,"end":712},"obj":"Sentence"},{"id":"T6","span":{"begin":713,"end":866},"obj":"Sentence"},{"id":"T7","span":{"begin":867,"end":1008},"obj":"Sentence"},{"id":"T8","span":{"begin":1009,"end":1143},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T2","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T3","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T4","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T5","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T6","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T7","pred":"source","obj":"PMID_GLOBAL"},{"subj":"T8","pred":"source","obj":"PMID_GLOBAL"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"genia-medco-coref","color":"#e593ec","default":true},{"id":"jnlpba-st-training","color":"#93eccb"},{"id":"pubmed-sentences-benchmark","color":"#ecb193"},{"id":"GENIAcorpus","color":"#9793ec"},{"id":"PMID_GLOBAL","color":"#a9ec93"}]}]}}