PubMed:10381655
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-9 | protein | denotes | NF-kappaB |
| T2 | 30-78 | protein | denotes | proapoptotic and antiapoptotic regulatory factor |
| T3 | 115-124 | protein | denotes | NF-kappaB |
| T4 | 198-215 | cell_line | denotes | T cell hybridomas |
| T5 | 308-317 | protein | denotes | NF-kappaB |
| T6 | 336-366 | protein | denotes | dominant negative IkappaBalpha |
| T7 | 492-502 | protein | denotes | Fas Ligand |
| T8 | 504-508 | protein | denotes | FasL |
| T9 | 552-561 | protein | denotes | NF-kappaB |
| T10 | 610-619 | RNA | denotes | FasL mRNA |
| T11 | 694-703 | protein | denotes | NF-kappaB |
| T12 | 709-728 | protein | denotes | proapoptotic factor |
| T13 | 772-781 | protein | denotes | NF-kappaB |
| T14 | 865-874 | protein | denotes | NF-kappaB |
| T15 | 935-944 | protein | denotes | NF-kappaB |
| T16 | 1012-1021 | protein | denotes | NF-kappaB |
| T17 | 1065-1075 | cell_type | denotes | thymocytes |
| T18 | 1122-1147 | cell_type | denotes | mature peripheral T cells |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 0-9 | NP | denotes | NF-kappaB |
| C2 | 115-124 | NP | denotes | NF-kappaB |
| C3 | 217-259 | NP | denotes | both T cell activators and glucocorticoids |
| C4 | 267-276 | NP | denotes | apoptosis |
| C5 | 308-326 | NP | denotes | NF-kappaB activity |
| C6 | 392-419 | NP | denotes | these two apoptotic signals |
| C7 | 527-536 | NP | denotes | apoptosis |
| C8 | 552-570 | NP | denotes | NF-kappaB activity |
| C9 | 647-656 | NP | denotes | apoptosis |
| C10 | 694-703 | NP | denotes | NF-kappaB |
| C11 | 707-728 | NP | denotes | a proapoptotic factor |
| C12 | 772-781 | NP | denotes | NF-kappaB |
| C13 | 865-874 | NP | denotes | NF-kappaB |
| C14 | 893-916 | NP | denotes | an antiapoptotic factor |
| C15 | 935-944 | NP | denotes | NF-kappaB |
| C16 | 1012-1021 | NP | denotes | NF-kappaB |
| C17 | 1038-1061 | NP | denotes | an antiapoptotic factor |
| C18 | 1097-1118 | NP | denotes | a proapoptotic factor |
| R1 | C2 | C1 | coref-ident | NF-kappaB,NF-kappaB |
| R2 | C6 | C3 | coref-ident | these two apoptotic signals,both T cell activators and glucocorticoids |
| R3 | C7 | C4 | coref-ident | apoptosis,apoptosis |
| R4 | C8 | C5 | coref-ident | NF-kappaB activity,NF-kappaB activity |
| R5 | C9 | C7 | coref-ident | apoptosis,apoptosis |
| R6 | C10 | C2 | coref-ident | NF-kappaB,NF-kappaB |
| R7 | C12 | C10 | coref-ident | NF-kappaB,NF-kappaB |
| R8 | C13 | C12 | coref-ident | NF-kappaB,NF-kappaB |
| R9 | C15 | C13 | coref-ident | NF-kappaB,NF-kappaB |
| R10 | C16 | C15 | coref-ident | NF-kappaB,NF-kappaB |
| R11 | C17 | C14 | coref-ident | an antiapoptotic factor,an antiapoptotic factor |
| R12 | C18 | C11 | coref-ident | a proapoptotic factor,a proapoptotic factor |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-105 | Sentence | denotes | NF-kappaB functions as both a proapoptotic and antiapoptotic regulatory factor within a single cell type. |
| S2 | 106-194 | Sentence | denotes | Recently NF-kappaB has been shown to have both proapoptotic and antiapoptotic functions. |
| S3 | 195-277 | Sentence | denotes | In T cell hybridomas, both T cell activators and glucocorticoids induce apoptosis. |
| S4 | 278-420 | Sentence | denotes | Here we show that blockade of NF-kappaB activity, using a dominant negative IkappaBalpha, has opposite effects on these two apoptotic signals. |
| S5 | 421-537 | Sentence | denotes | Treatment with PMA plus ionomycin (P/I) results in the upregulation of Fas Ligand (FasL) and induction of apoptosis. |
| S6 | 538-745 | Sentence | denotes | Inhibition of NF-kappaB activity inhibits the P/I mediated induction of FasL mRNA and decreases the level of apoptosis in these cultures, thus establishing NF-kappaB as a proapoptotic factor in this context. |
| S7 | 746-917 | Sentence | denotes | Conversely, inhibition of NF-kappaB confers a tenfold increase in glucocorticoid mediated apoptosis, establishing that NF-kappaB also functions as an antiapoptotic factor. |
| S8 | 918-988 | Sentence | denotes | We conclude that NF-kappaB is a context-dependent apoptosis regulator. |
| S9 | 989-1148 | Sentence | denotes | Our data suggests that NF-kappaB may function as an antiapoptotic factor in thymocytes while functioning as a proapoptotic factor in mature peripheral T cells. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-9 | protein_complex | denotes | NF-kappaB |
| T2 | 115-124 | protein_complex | denotes | NF-kappaB |
| T3 | 198-215 | cell_line | denotes | T cell hybridomas |
| T4 | 222-239 | other_name | denotes | T cell activators |
| T5 | 244-259 | lipid | denotes | glucocorticoids |
| T6 | 267-276 | other_name | denotes | apoptosis |
| T7 | 308-317 | protein_molecule | denotes | NF-kappaB |
| T8 | 336-366 | protein_molecule | denotes | dominant negative IkappaBalpha |
| T9 | 402-419 | other_name | denotes | apoptotic signals |
| T10 | 436-439 | other_organic_compound | denotes | PMA |
| T11 | 445-454 | other_organic_compound | denotes | ionomycin |
| T12 | 456-459 | other_organic_compound | denotes | P/I |
| T13 | 492-502 | protein_molecule | denotes | Fas Ligand |
| T14 | 504-508 | protein_molecule | denotes | FasL |
| T15 | 527-536 | other_name | denotes | apoptosis |
| T16 | 552-561 | protein_complex | denotes | NF-kappaB |
| T17 | 584-587 | other_organic_compound | denotes | P/I |
| T18 | 610-614 | protein_molecule | denotes | FasL |
| T19 | 647-656 | other_name | denotes | apoptosis |
| T20 | 694-703 | protein_complex | denotes | NF-kappaB |
| T21 | 709-728 | protein_molecule | denotes | proapoptotic factor |
| T22 | 772-781 | protein_molecule | denotes | NF-kappaB |
| T23 | 836-845 | other_name | denotes | apoptosis |
| T24 | 865-874 | protein_complex | denotes | NF-kappaB |
| T25 | 896-916 | other_name | denotes | antiapoptotic factor |
| T26 | 935-944 | protein_complex | denotes | NF-kappaB |
| T27 | 950-967 | other_name | denotes | context-dependent |
| T28 | 968-977 | other_name | denotes | apoptosis |
| T29 | 1012-1021 | protein_complex | denotes | NF-kappaB |
| T30 | 1065-1075 | cell_type | denotes | thymocytes |
| T31 | 1122-1147 | cell_type | denotes | mature peripheral T cells |