PubMed:10318773 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/10318773","sourcedb":"PubMed","sourceid":"10318773","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/10318773","text":"A newly identified member of tumor necrosis factor receptor superfamily (TR6) suppresses LIGHT-mediated apoptosis.\nTR6 (decoy receptor 3 (DcR3)) is a new member of the tumor necrosis factor receptor (TNFR) family. TR6 mRNA is expressed in lung tissues and colon adenocarcinoma, SW480. In addition, the expression of TR6 mRNA was shown in the endothelial cell line and induced by phorbol 12-myristate 13-acetate/ionomycin in Jurkat T leukemia cells. The open reading frame of TR6 encodes 300 amino acids with a 29-residue signal sequence but no transmembrane region. Using histidine-tagged recombinant TR6, we screened soluble forms of TNF-ligand proteins with immunoprecipitation. Here, we demonstrate that TR6 specifically binds two cellular ligands, LIGHT (herpes virus entry mediator (HVEM)-L) and Fas ligand (FasL/CD95L). These bindings were confirmed with HEK 293 EBNA cells transfected with LIGHT cDNA by flow cytometry. TR6 inhibited LIGHT-induced cytotoxicity in HT29 cells. It has been shown that LIGHT triggers apoptosis of various tumor cells including HT29 cells that express both lymphotoxin beta receptor (LTbetaR) and HVEM/TR2 receptors. Our data suggest that TR6 inhibits the interactions of LIGHT with HVEM/TR2 and LTbetaR, thereby suppressing LIGHT- mediated HT29 cell death. Thus, TR6 may play a regulatory role for suppressing in FasL- and LIGHT-mediated cell death.","tracks":[{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":168,"end":173},"obj":"HP_0002664"},{"id":"T2","span":{"begin":239,"end":276},"obj":"HP_0030078"},{"id":"T3","span":{"begin":433,"end":441},"obj":"HP_0001909"},{"id":"T4","span":{"begin":1042,"end":1047},"obj":"HP_0002664"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"}]},{"project":"AIMed","denotations":[{"id":"T1","span":{"begin":73,"end":76},"obj":"protein"},{"id":"T2","span":{"begin":89,"end":94},"obj":"protein"},{"id":"T3","span":{"begin":115,"end":118},"obj":"protein"},{"id":"T4","span":{"begin":120,"end":136},"obj":"protein"},{"id":"T5","span":{"begin":138,"end":142},"obj":"protein"},{"id":"T6","span":{"begin":214,"end":217},"obj":"protein"},{"id":"T7","span":{"begin":316,"end":319},"obj":"protein"},{"id":"T8","span":{"begin":475,"end":478},"obj":"protein"},{"id":"T9","span":{"begin":601,"end":604},"obj":"protein"},{"id":"T10","span":{"begin":707,"end":710},"obj":"protein"},{"id":"T11","span":{"begin":752,"end":757},"obj":"protein"},{"id":"T12","span":{"begin":759,"end":795},"obj":"protein"},{"id":"T13","span":{"begin":801,"end":811},"obj":"protein"},{"id":"T14","span":{"begin":813,"end":817},"obj":"protein"},{"id":"T15","span":{"begin":818,"end":823},"obj":"protein"},{"id":"T16","span":{"begin":897,"end":902},"obj":"protein"},{"id":"T17","span":{"begin":927,"end":930},"obj":"protein"},{"id":"T18","span":{"begin":941,"end":946},"obj":"protein"},{"id":"T19","span":{"begin":1006,"end":1011},"obj":"protein"},{"id":"T20","span":{"begin":1093,"end":1118},"obj":"protein"},{"id":"T21","span":{"begin":1120,"end":1127},"obj":"protein"},{"id":"T22","span":{"begin":1133,"end":1137},"obj":"protein"},{"id":"T23","span":{"begin":1138,"end":1141},"obj":"protein"},{"id":"T24","span":{"begin":1175,"end":1178},"obj":"protein"},{"id":"T25","span":{"begin":1208,"end":1213},"obj":"protein"},{"id":"T26","span":{"begin":1219,"end":1223},"obj":"protein"},{"id":"T27","span":{"begin":1224,"end":1227},"obj":"protein"},{"id":"T28","span":{"begin":1232,"end":1239},"obj":"protein"},{"id":"T29","span":{"begin":1261,"end":1266},"obj":"protein"},{"id":"T30","span":{"begin":1300,"end":1303},"obj":"protein"},{"id":"T31","span":{"begin":1350,"end":1354},"obj":"protein"},{"id":"T32","span":{"begin":1360,"end":1365},"obj":"protein"}],"attributes":[{"subj":"T1","pred":"source","obj":"AIMed"},{"subj":"T2","pred":"source","obj":"AIMed"},{"subj":"T3","pred":"source","obj":"AIMed"},{"subj":"T4","pred":"source","obj":"AIMed"},{"subj":"T5","pred":"source","obj":"AIMed"},{"subj":"T6","pred":"source","obj":"AIMed"},{"subj":"T7","pred":"source","obj":"AIMed"},{"subj":"T8","pred":"source","obj":"AIMed"},{"subj":"T9","pred":"source","obj":"AIMed"},{"subj":"T10","pred":"source","obj":"AIMed"},{"subj":"T11","pred":"source","obj":"AIMed"},{"subj":"T12","pred":"source","obj":"AIMed"},{"subj":"T13","pred":"source","obj":"AIMed"},{"subj":"T14","pred":"source","obj":"AIMed"},{"subj":"T15","pred":"source","obj":"AIMed"},{"subj":"T16","pred":"source","obj":"AIMed"},{"subj":"T17","pred":"source","obj":"AIMed"},{"subj":"T18","pred":"source","obj":"AIMed"},{"subj":"T19","pred":"source","obj":"AIMed"},{"subj":"T20","pred":"source","obj":"AIMed"},{"subj":"T21","pred":"source","obj":"AIMed"},{"subj":"T22","pred":"source","obj":"AIMed"},{"subj":"T23","pred":"source","obj":"AIMed"},{"subj":"T24","pred":"source","obj":"AIMed"},{"subj":"T25","pred":"source","obj":"AIMed"},{"subj":"T26","pred":"source","obj":"AIMed"},{"subj":"T27","pred":"source","obj":"AIMed"},{"subj":"T28","pred":"source","obj":"AIMed"},{"subj":"T29","pred":"source","obj":"AIMed"},{"subj":"T30","pred":"source","obj":"AIMed"},{"subj":"T31","pred":"source","obj":"AIMed"},{"subj":"T32","pred":"source","obj":"AIMed"}]},{"project":"FSU-PRGE","denotations":[{"id":"T1","span":{"begin":29,"end":71},"obj":"protein"},{"id":"T2","span":{"begin":73,"end":76},"obj":"protein"},{"id":"T3","span":{"begin":89,"end":94},"obj":"protein"},{"id":"T4","span":{"begin":115,"end":118},"obj":"protein"},{"id":"T5","span":{"begin":120,"end":136},"obj":"protein"},{"id":"T6","span":{"begin":138,"end":142},"obj":"protein"},{"id":"T7","span":{"begin":168,"end":212},"obj":"protein"},{"id":"T8","span":{"begin":214,"end":217},"obj":"protein"},{"id":"T9","span":{"begin":316,"end":319},"obj":"protein"},{"id":"T10","span":{"begin":475,"end":478},"obj":"protein"},{"id":"T11","span":{"begin":601,"end":604},"obj":"protein"},{"id":"T12","span":{"begin":635,"end":638},"obj":"protein"},{"id":"T13","span":{"begin":707,"end":710},"obj":"protein"},{"id":"T14","span":{"begin":752,"end":757},"obj":"protein"},{"id":"T15","span":{"begin":759,"end":795},"obj":"protein"},{"id":"T16","span":{"begin":801,"end":811},"obj":"protein"},{"id":"T17","span":{"begin":813,"end":817},"obj":"protein"},{"id":"T18","span":{"begin":818,"end":823},"obj":"protein"},{"id":"T19","span":{"begin":897,"end":902},"obj":"protein"},{"id":"T20","span":{"begin":927,"end":930},"obj":"protein"},{"id":"T21","span":{"begin":941,"end":946},"obj":"protein"},{"id":"T22","span":{"begin":1006,"end":1011},"obj":"protein"},{"id":"T23","span":{"begin":1093,"end":1118},"obj":"protein"},{"id":"T24","span":{"begin":1120,"end":1127},"obj":"protein"},{"id":"T25","span":{"begin":1133,"end":1137},"obj":"protein"},{"id":"T26","span":{"begin":1138,"end":1141},"obj":"protein"},{"id":"T27","span":{"begin":1175,"end":1178},"obj":"protein"},{"id":"T28","span":{"begin":1208,"end":1213},"obj":"protein"},{"id":"T29","span":{"begin":1219,"end":1223},"obj":"protein"},{"id":"T30","span":{"begin":1224,"end":1227},"obj":"protein"},{"id":"T31","span":{"begin":1232,"end":1239},"obj":"protein"},{"id":"T32","span":{"begin":1261,"end":1266},"obj":"protein"},{"id":"T33","span":{"begin":1300,"end":1303},"obj":"protein"},{"id":"T34","span":{"begin":1350,"end":1354},"obj":"protein"},{"id":"T35","span":{"begin":1360,"end":1365},"obj":"protein"}],"attributes":[{"subj":"T1","pred":"source","obj":"FSU-PRGE"},{"subj":"T2","pred":"source","obj":"FSU-PRGE"},{"subj":"T3","pred":"source","obj":"FSU-PRGE"},{"subj":"T4","pred":"source","obj":"FSU-PRGE"},{"subj":"T5","pred":"source","obj":"FSU-PRGE"},{"subj":"T6","pred":"source","obj":"FSU-PRGE"},{"subj":"T7","pred":"source","obj":"FSU-PRGE"},{"subj":"T8","pred":"source","obj":"FSU-PRGE"},{"subj":"T9","pred":"source","obj":"FSU-PRGE"},{"subj":"T10","pred":"source","obj":"FSU-PRGE"},{"subj":"T11","pred":"source","obj":"FSU-PRGE"},{"subj":"T12","pred":"source","obj":"FSU-PRGE"},{"subj":"T13","pred":"source","obj":"FSU-PRGE"},{"subj":"T14","pred":"source","obj":"FSU-PRGE"},{"subj":"T15","pred":"source","obj":"FSU-PRGE"},{"subj":"T16","pred":"source","obj":"FSU-PRGE"},{"subj":"T17","pred":"source","obj":"FSU-PRGE"},{"subj":"T18","pred":"source","obj":"FSU-PRGE"},{"subj":"T19","pred":"source","obj":"FSU-PRGE"},{"subj":"T20","pred":"source","obj":"FSU-PRGE"},{"subj":"T21","pred":"source","obj":"FSU-PRGE"},{"subj":"T22","pred":"source","obj":"FSU-PRGE"},{"subj":"T23","pred":"source","obj":"FSU-PRGE"},{"subj":"T24","pred":"source","obj":"FSU-PRGE"},{"subj":"T25","pred":"source","obj":"FSU-PRGE"},{"subj":"T26","pred":"source","obj":"FSU-PRGE"},{"subj":"T27","pred":"source","obj":"FSU-PRGE"},{"subj":"T28","pred":"source","obj":"FSU-PRGE"},{"subj":"T29","pred":"source","obj":"FSU-PRGE"},{"subj":"T30","pred":"source","obj":"FSU-PRGE"},{"subj":"T31","pred":"source","obj":"FSU-PRGE"},{"subj":"T32","pred":"source","obj":"FSU-PRGE"},{"subj":"T33","pred":"source","obj":"FSU-PRGE"},{"subj":"T34","pred":"source","obj":"FSU-PRGE"},{"subj":"T35","pred":"source","obj":"FSU-PRGE"}]},{"project":"sentences","denotations":[{"id":"T1","span":{"begin":0,"end":114},"obj":"Sentence"},{"id":"T2","span":{"begin":115,"end":213},"obj":"Sentence"},{"id":"T3","span":{"begin":214,"end":284},"obj":"Sentence"},{"id":"T4","span":{"begin":285,"end":448},"obj":"Sentence"},{"id":"T5","span":{"begin":449,"end":565},"obj":"Sentence"},{"id":"T6","span":{"begin":566,"end":680},"obj":"Sentence"},{"id":"T7","span":{"begin":681,"end":825},"obj":"Sentence"},{"id":"T8","span":{"begin":826,"end":926},"obj":"Sentence"},{"id":"T9","span":{"begin":927,"end":982},"obj":"Sentence"},{"id":"T10","span":{"begin":983,"end":1152},"obj":"Sentence"},{"id":"T11","span":{"begin":1153,"end":1293},"obj":"Sentence"},{"id":"T12","span":{"begin":1294,"end":1386},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T8","pred":"source","obj":"sentences"},{"subj":"T9","pred":"source","obj":"sentences"},{"subj":"T10","pred":"source","obj":"sentences"},{"subj":"T11","pred":"source","obj":"sentences"},{"subj":"T12","pred":"source","obj":"sentences"}]},{"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":29,"end":34},"obj":"Disease"},{"id":"T2","span":{"begin":168,"end":173},"obj":"Disease"},{"id":"T3","span":{"begin":256,"end":276},"obj":"Disease"},{"id":"T4","span":{"begin":433,"end":441},"obj":"Disease"},{"id":"T5","span":{"begin":1042,"end":1047},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005070"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005070"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0002271"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0005059"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005070"},{"subj":"T1","pred":"source","obj":"mondo_disease"},{"subj":"T2","pred":"source","obj":"mondo_disease"},{"subj":"T3","pred":"source","obj":"mondo_disease"},{"subj":"T4","pred":"source","obj":"mondo_disease"},{"subj":"T5","pred":"source","obj":"mondo_disease"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":239,"end":243},"obj":"http://purl.obolibrary.org/obo/MAT_0000135"},{"id":"T2","span":{"begin":256,"end":261},"obj":"http://purl.obolibrary.org/obo/MAT_0000526"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"},{"subj":"T2","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":239,"end":243},"obj":"Body_part"},{"id":"T2","span":{"begin":256,"end":261},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000135"},{"id":"A2","pred":"mat_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MAT_0000526"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"},{"subj":"T2","pred":"source","obj":"Anatomy-MAT"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":239,"end":243},"obj":"Body_part"},{"id":"T2","span":{"begin":256,"end":261},"obj":"Body_part"},{"id":"T3","span":{"begin":342,"end":358},"obj":"Body_part"},{"id":"T4","span":{"begin":544,"end":557},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CL_0000115"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/GO_0016020"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T2","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T3","pred":"source","obj":"Anatomy-UBERON"},{"subj":"T4","pred":"source","obj":"Anatomy-UBERON"}]},{"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":29,"end":34},"obj":"Phenotype"},{"id":"T2","span":{"begin":168,"end":173},"obj":"Phenotype"},{"id":"T3","span":{"begin":433,"end":441},"obj":"Phenotype"},{"id":"T4","span":{"begin":1042,"end":1047},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0002664"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0002664"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0001909"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0002664"},{"subj":"T1","pred":"source","obj":"HP-phenotype"},{"subj":"T2","pred":"source","obj":"HP-phenotype"},{"subj":"T3","pred":"source","obj":"HP-phenotype"},{"subj":"T4","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]},{"project":"CL-cell","denotations":[{"id":"T1","span":{"begin":342,"end":358},"obj":"Cell"},{"id":"T2","span":{"begin":1042,"end":1053},"obj":"Cell"}],"attributes":[{"id":"A1","pred":"cl_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/CL:0000115"},{"id":"A2","pred":"cl_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CL:0001063"},{"subj":"T1","pred":"source","obj":"CL-cell"},{"subj":"T2","pred":"source","obj":"CL-cell"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"PubmedHPO","color":"#ecce93","default":true},{"id":"AIMed","color":"#b493ec"},{"id":"FSU-PRGE","color":"#93ec9a"},{"id":"sentences","color":"#ec93a5"},{"id":"mondo_disease","color":"#93bfec"},{"id":"Glycosmos6-MAT","color":"#d9ec93"},{"id":"Anatomy-MAT","color":"#e493ec"},{"id":"Anatomy-UBERON","color":"#93ecca"},{"id":"HP-phenotype","color":"#ecb093"},{"id":"CL-cell","color":"#9693ec"}]}]}}