PubMed:10233882
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 22-31 | protein | denotes | NF-kappaB |
| T2 | 35-65 | cell_type | denotes | human CD34(+) bone marrow cell |
| T3 | 80-100 | protein | denotes | transcription factor |
| T4 | 102-111 | protein | denotes | NF-kappaB |
| T5 | 340-349 | protein | denotes | NF-kappaB |
| T6 | 353-384 | cell_type | denotes | human CD34(+) bone marrow cells |
| T7 | 453-484 | cell_type | denotes | human CD34(+) bone marrow cells |
| T8 | 493-502 | protein | denotes | NF-kappaB |
| T9 | 589-598 | protein | denotes | cytokines |
| T10 | 604-631 | protein | denotes | tumor necrosis factor alpha |
| T11 | 633-646 | protein | denotes | interleukin-3 |
| T12 | 652-700 | protein | denotes | granulocyte-macrophage colony-stimulating factor |
| T13 | 735-744 | protein | denotes | NF-kappaB |
| T14 | 771-795 | cell_type | denotes | CD34(+) bone marrow cell |
| T15 | 878-887 | protein | denotes | NF-kappaB |
| T16 | 928-967 | cell_type | denotes | hematopoietic stem and progenitor cells |
| T17 | 1029-1038 | protein | denotes | NF-kappaB |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-75 | Sentence | denotes | An essential role for NF-kappaB in human CD34(+) bone marrow cell survival. |
| S2 | 76-319 | Sentence | denotes | The transcription factor, NF-kappaB, is important for T-cell activation, B-cell maturation, and human immunodeficiency virus transcription and plays a role in alternatively mediating and protecting against apoptosis in a variety of cell types. |
| S3 | 320-408 | Sentence | denotes | However, a role for NF-kappaB in human CD34(+) bone marrow cells has not been described. |
| S4 | 409-701 | Sentence | denotes | We provide evidence here that virtually all human CD34(+) bone marrow cells express NF-kappaB that can be activated by exposure to phorbol 12-myristate 13-acetate and a variety of cytokines, eg, tumor necrosis factor alpha, interleukin-3, and granulocyte-macrophage colony-stimulating factor. |
| S5 | 702-829 | Sentence | denotes | In addition, we demonstrate that NF-kappaB may be required for human CD34(+) bone marrow cell clonogenic function and survival. |
| S6 | 830-1121 | Sentence | denotes | These results offer insight into a new role for NF-kappaB in maintaining survival and function in hematopoietic stem and progenitor cells and suggest that proposed strategies involving inhibition of NF-kappaB activation as an adjunct to cancer chemotherapy should be approached with caution. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 22-31 | NP | denotes | NF-kappaB |
| C2 | 76-100 | NP | denotes | The transcription factor |
| C3 | 102-111 | NP | denotes | NF-kappaB |
| C4 | 340-349 | NP | denotes | NF-kappaB |
| C5 | 353-384 | NP | denotes | human CD34(+) bone marrow cells |
| C6 | 420-428 | NP | denotes | evidence |
| C7 | 434-438 | NP | denotes | that |
| C8 | 449-484 | NP | denotes | all human CD34(+) bone marrow cells |
| C9 | 493-502 | NP | denotes | NF-kappaB |
| C10 | 503-507 | NP | denotes | that |
| C11 | 735-744 | NP | denotes | NF-kappaB |
| C12 | 878-887 | NP | denotes | NF-kappaB |
| R1 | C2 | C1 | coref-ident | The transcription factor,NF-kappaB |
| R2 | C3 | C2 | coref-appos | NF-kappaB,The transcription factor |
| R3 | C4 | C2 | coref-ident | NF-kappaB,The transcription factor |
| R4 | C7 | C6 | coref-relat | that,evidence |
| R5 | C8 | C5 | coref-ident | all human CD34(+) bone marrow cells,human CD34(+) bone marrow cells |
| R6 | C10 | C9 | coref-relat | that,NF-kappaB |
| R7 | C11 | C4 | coref-ident | NF-kappaB,NF-kappaB |
| R8 | C12 | C11 | coref-ident | NF-kappaB,NF-kappaB |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 22-31 | protein_complex | denotes | NF-kappaB |
| T2 | 35-65 | cell_type | denotes | human CD34(+) bone marrow cell |
| T3 | 80-100 | protein_family_or_group | denotes | transcription factor |
| T4 | 102-111 | protein_complex | denotes | NF-kappaB |
| T5 | 130-147 | other_name | denotes | T-cell activation |
| T6 | 149-166 | other_name | denotes | B-cell maturation |
| T7 | 172-200 | virus | denotes | human immunodeficiency virus |
| T8 | 282-291 | other_name | denotes | apoptosis |
| T9 | 340-349 | protein_complex | denotes | NF-kappaB |
| T10 | 353-384 | cell_type | denotes | human CD34(+) bone marrow cells |
| T11 | 453-484 | cell_type | denotes | human CD34(+) bone marrow cells |
| T12 | 493-502 | protein_complex | denotes | NF-kappaB |
| T13 | 540-571 | other_organic_compound | denotes | phorbol 12-myristate 13-acetate |
| T14 | 589-598 | protein_family_or_group | denotes | cytokines |
| T15 | 604-631 | protein_molecule | denotes | tumor necrosis factor alpha |
| T16 | 633-646 | protein_molecule | denotes | interleukin-3 |
| T17 | 652-700 | protein_molecule | denotes | granulocyte-macrophage colony-stimulating factor |
| T18 | 735-744 | protein_complex | denotes | NF-kappaB |
| T19 | 771-795 | cell_type | denotes | CD34(+) bone marrow cell |
| T20 | 878-887 | protein_complex | denotes | NF-kappaB |
| T21 | 1029-1038 | protein_complex | denotes | NF-kappaB |
| T22 | 1067-1086 | other_name | denotes | cancer chemotherapy |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 178-194 | HP_0002721 | denotes | immunodeficiency |
| T2 | 604-609 | HP_0002664 | denotes | tumor |
| T3 | 1067-1073 | HP_0002664 | denotes | cancer |