PubMed:10229231
Annnotations
jnlpba-st-training
{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":14,"end":24},"obj":"protein"},{"id":"T2","span":{"begin":54,"end":77},"obj":"DNA"},{"id":"T3","span":{"begin":222,"end":235},"obj":"cell_type"},{"id":"T4","span":{"begin":255,"end":258},"obj":"protein"},{"id":"T5","span":{"begin":258,"end":269},"obj":"protein"},{"id":"T6","span":{"begin":271,"end":275},"obj":"protein"},{"id":"T7","span":{"begin":371,"end":377},"obj":"protein"},{"id":"T8","span":{"begin":381,"end":401},"obj":"protein"},{"id":"T9","span":{"begin":440,"end":444},"obj":"protein"},{"id":"T10","span":{"begin":492,"end":509},"obj":"protein"},{"id":"T11","span":{"begin":535,"end":539},"obj":"protein"},{"id":"T12","span":{"begin":598,"end":603},"obj":"protein"},{"id":"T13","span":{"begin":636,"end":640},"obj":"protein"},{"id":"T14","span":{"begin":657,"end":661},"obj":"protein"},{"id":"T15","span":{"begin":843,"end":847},"obj":"protein"}],"text":"Regulation of Fas ligand expression and cell death by apoptosis-linked gene 4.\nProgrammed cell death is a process required for the normal development of an organism. One of the best understood apoptotic pathways occurs in T lymphocytes and is mediated by Fas/Fas ligand (FasL) interaction. During studies of apoptosis induced by T cell-receptor engagement, we identified ALG-4F, a truncated transcript that prevents T cell-receptor-induced FasL upregulation and cell death. Overexpression of full-length ALG-4 induced transcription of FasL and, consequently, apoptosis. These results indicate that ALG-4 is necessary and sufficient for FasL expression. Fas/FasL interaction initiates cell death in many other systems, and its dysregulation is a mechanism by which several pathologic conditions arise. Understanding the molecular mechanisms of FasL regulation could be very useful in elucidating how these diseases develop and in identifying potential therapeutic targets."}
pubmed-sentences-benchmark
{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":78},"obj":"Sentence"},{"id":"S2","span":{"begin":79,"end":165},"obj":"Sentence"},{"id":"S3","span":{"begin":166,"end":289},"obj":"Sentence"},{"id":"S4","span":{"begin":290,"end":473},"obj":"Sentence"},{"id":"S5","span":{"begin":474,"end":569},"obj":"Sentence"},{"id":"S6","span":{"begin":570,"end":652},"obj":"Sentence"},{"id":"S7","span":{"begin":653,"end":800},"obj":"Sentence"},{"id":"S8","span":{"begin":801,"end":971},"obj":"Sentence"}],"text":"Regulation of Fas ligand expression and cell death by apoptosis-linked gene 4.\nProgrammed cell death is a process required for the normal development of an organism. One of the best understood apoptotic pathways occurs in T lymphocytes and is mediated by Fas/Fas ligand (FasL) interaction. During studies of apoptosis induced by T cell-receptor engagement, we identified ALG-4F, a truncated transcript that prevents T cell-receptor-induced FasL upregulation and cell death. Overexpression of full-length ALG-4 induced transcription of FasL and, consequently, apoptosis. These results indicate that ALG-4 is necessary and sufficient for FasL expression. Fas/FasL interaction initiates cell death in many other systems, and its dysregulation is a mechanism by which several pathologic conditions arise. Understanding the molecular mechanisms of FasL regulation could be very useful in elucidating how these diseases develop and in identifying potential therapeutic targets."}
genia-medco-coref
{"project":"genia-medco-coref","denotations":[{"id":"C2","span":{"begin":14,"end":35},"obj":"NP"},{"id":"C1","span":{"begin":0,"end":35},"obj":"NP"},{"id":"C3","span":{"begin":40,"end":50},"obj":"NP"},{"id":"C4","span":{"begin":255,"end":288},"obj":"NP"},{"id":"C5","span":{"begin":371,"end":377},"obj":"NP"},{"id":"C7","span":{"begin":379,"end":401},"obj":"NP"},{"id":"C8","span":{"begin":402,"end":406},"obj":"NP"},{"id":"C9","span":{"begin":462,"end":472},"obj":"NP"},{"id":"C6","span":{"begin":379,"end":472},"obj":"NP"},{"id":"C10","span":{"begin":598,"end":603},"obj":"NP"},{"id":"C11","span":{"begin":636,"end":651},"obj":"NP"},{"id":"C12","span":{"begin":653,"end":673},"obj":"NP"},{"id":"C13","span":{"begin":722,"end":725},"obj":"NP"},{"id":"C14","span":{"begin":743,"end":754},"obj":"NP"},{"id":"C15","span":{"begin":758,"end":763},"obj":"NP"},{"id":"C16","span":{"begin":843,"end":858},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-relat","subj":"C8","obj":"C7"},{"id":"R2","pred":"coref-ident","subj":"C9","obj":"C3"},{"id":"R3","pred":"coref-appos","subj":"C6","obj":"C5"},{"id":"R4","pred":"coref-ident","subj":"C10","obj":"C5"},{"id":"R5","pred":"coref-ident","subj":"C11","obj":"C2"},{"id":"R6","pred":"coref-ident","subj":"C12","obj":"C4"},{"id":"R7","pred":"coref-pron","subj":"C13","obj":"C12"},{"id":"R8","pred":"coref-relat","subj":"C15","obj":"C14"},{"id":"R9","pred":"coref-ident","subj":"C16","obj":"C1"}],"text":"Regulation of Fas ligand expression and cell death by apoptosis-linked gene 4.\nProgrammed cell death is a process required for the normal development of an organism. One of the best understood apoptotic pathways occurs in T lymphocytes and is mediated by Fas/Fas ligand (FasL) interaction. During studies of apoptosis induced by T cell-receptor engagement, we identified ALG-4F, a truncated transcript that prevents T cell-receptor-induced FasL upregulation and cell death. Overexpression of full-length ALG-4 induced transcription of FasL and, consequently, apoptosis. These results indicate that ALG-4 is necessary and sufficient for FasL expression. Fas/FasL interaction initiates cell death in many other systems, and its dysregulation is a mechanism by which several pathologic conditions arise. Understanding the molecular mechanisms of FasL regulation could be very useful in elucidating how these diseases develop and in identifying potential therapeutic targets."}
GENIAcorpus
{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":14,"end":24},"obj":"protein_molecule"},{"id":"T2","span":{"begin":40,"end":50},"obj":"other_name"},{"id":"T3","span":{"begin":54,"end":77},"obj":"DNA_domain_or_region"},{"id":"T4","span":{"begin":90,"end":100},"obj":"other_name"},{"id":"T5","span":{"begin":131,"end":149},"obj":"other_name"},{"id":"T6","span":{"begin":193,"end":211},"obj":"other_name"},{"id":"T7","span":{"begin":222,"end":235},"obj":"cell_type"},{"id":"T8","span":{"begin":255,"end":258},"obj":"protein_molecule"},{"id":"T9","span":{"begin":258,"end":269},"obj":"protein_molecule"},{"id":"T10","span":{"begin":271,"end":275},"obj":"protein_molecule"},{"id":"T11","span":{"begin":308,"end":317},"obj":"other_name"},{"id":"T12","span":{"begin":329,"end":355},"obj":"other_name"},{"id":"T13","span":{"begin":371,"end":377},"obj":"protein_molecule"},{"id":"T14","span":{"begin":381,"end":401},"obj":"protein_molecule"},{"id":"T15","span":{"begin":416,"end":439},"obj":"other_name"},{"id":"T16","span":{"begin":440,"end":444},"obj":"protein_molecule"},{"id":"T17","span":{"begin":462,"end":472},"obj":"other_name"},{"id":"T18","span":{"begin":492,"end":509},"obj":"protein_molecule"},{"id":"T19","span":{"begin":518,"end":531},"obj":"other_name"},{"id":"T20","span":{"begin":535,"end":539},"obj":"protein_molecule"},{"id":"T21","span":{"begin":559,"end":568},"obj":"other_name"},{"id":"T22","span":{"begin":598,"end":603},"obj":"protein_molecule"},{"id":"T23","span":{"begin":636,"end":640},"obj":"protein_molecule"},{"id":"T24","span":{"begin":653,"end":657},"obj":"other_name"},{"id":"T25","span":{"begin":657,"end":661},"obj":"protein_molecule"},{"id":"T26","span":{"begin":684,"end":694},"obj":"other_name"},{"id":"T27","span":{"begin":819,"end":839},"obj":"other_name"},{"id":"T28","span":{"begin":843,"end":847},"obj":"protein_molecule"},{"id":"T29","span":{"begin":941,"end":970},"obj":"other_name"}],"text":"Regulation of Fas ligand expression and cell death by apoptosis-linked gene 4.\nProgrammed cell death is a process required for the normal development of an organism. One of the best understood apoptotic pathways occurs in T lymphocytes and is mediated by Fas/Fas ligand (FasL) interaction. During studies of apoptosis induced by T cell-receptor engagement, we identified ALG-4F, a truncated transcript that prevents T cell-receptor-induced FasL upregulation and cell death. Overexpression of full-length ALG-4 induced transcription of FasL and, consequently, apoptosis. These results indicate that ALG-4 is necessary and sufficient for FasL expression. Fas/FasL interaction initiates cell death in many other systems, and its dysregulation is a mechanism by which several pathologic conditions arise. Understanding the molecular mechanisms of FasL regulation could be very useful in elucidating how these diseases develop and in identifying potential therapeutic targets."}