> top > docs > PubMed:10201929 > annotations

PubMed:10201929 JSONTXT

Annnotations TAB JSON ListView MergeView

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 54-58 protein denotes AP-1
T2 77-99 cell_line denotes NKL human NK cell line
T3 298-317 cell_line denotes human NKL cell line
T4 355-390 protein denotes very early activator protein (AP)-1
T5 391-417 DNA denotes transcription factor genes
T6 426-430 DNA denotes JunB
T7 432-436 DNA denotes FosB
T8 441-446 DNA denotes c-Fos
T9 487-507 protein denotes Jun-Fos heterodimers
T10 626-687 protein denotes immunoglobulin-like transcript-2/leukocyte Ig-like receptor 1
T11 691-700 cell_type denotes NKL cells
T12 705-712 protein denotes HLA-B27
T13 716-728 cell_type denotes target cells
T14 987-1012 protein denotes AP-1 transcription factor
T15 1102-1130 protein denotes NK cell inhibitory receptors
T16 1135-1156 protein denotes MHC class I molecules
T17 1194-1198 protein denotes AP-1

semrep-sample

Id Subject Object Predicate Lexical cue
E1-ti-1 0-10 cui:C0425152 denotes Engagement
E2-ti-1 14-21 cui:C0205296 denotes natural
E3-ti-1 22-34 cui:C0596402 denotes cytotoxicity
E4-ti-1 54-58 cui:C0085828 denotes AP-1
E5-ti-1 59-69 cui:C0185117 denotes expression
E6-ti-1 77-80 entrez:84662 denotes NKL
E7-ti-1 81-99 cui:C0682523 denotes human NK cell line
T1 59-69 PART_OF denotes expression
E1-ab-1 101-108 cui:C0022688 denotes NK cell
E2-ab-1 109-121 cui:C0596402 denotes cytotoxicity
E3-ab-1 127-131 cui:C0456962 denotes fast
E4-ab-1 136-145 cui:C0442799 denotes efficient
E5-ab-1 146-155 cui:C0441712 denotes mechanism
E6-ab-1 159-170 cui:C0221284 denotes target cell
E7-ab-1 171-176 cui:C1260960 denotes lysis
T2 146-155 MANIFESTATION_OF denotes mechanism
E1-ab-2 184-197 cui:C0040649 denotes transcription
E2-ab-2 198-206 cui:C0936012 denotes analysis
E3-ab-2 226-235 cui:C0169911 denotes messenger
E4-ab-2 236-242 cui:C1510438 denotes assays
E5-ab-2 262-269 cui:C0205296 denotes natural
E6-ab-2 270-282 cui:C0596402 denotes cytotoxicity
E7-ab-2 304-307 entrez:84662 denotes NKL
E8-ab-2 298-317 cui:C0682523 denotes human NKL cell line
E9-ab-2 334-338 cui:C0035696 denotes mRNA
E10-ab-2 355-359 cui:C0442824 denotes very
E11-ab-2 360-365 cui:C1279919 denotes early
E12-ab-2 366-390 cui:C0085828 denotes activator protein (AP)-1
E13-ab-2 391-417 cui:C0812327 denotes transcription factor genes
E14-ab-2 426-430 cui:C0812313 denotes JunB
E15-ab-2 432-436 cui:C1333571 denotes FosB
E16-ab-2 441-446 cui:C0085301 denotes c-Fos
T3 391-430 ISA denotes transcription factor genes such as JunB
T4 391-430 ISA denotes transcription factor genes such as JunB
T5 226-242 USES denotes messenger assays
E1-ab-3 451-459 cui:C0442796 denotes addition
E2-ab-3 461-472 cui:C1148673 denotes DNA-binding
E3-ab-3 473-483 cui:C0441655 denotes activities
E4-ab-3 487-490 cui:C0085296 denotes Jun
E5-ab-3 491-494 cui:C0085940 denotes Fos
E6-ab-3 525-562 cui:C0949632 denotes electrophoretic mobility shift assays
E7-ab-3 574-580 cui:C0750729 denotes course
E8-ab-3 584-591 cui:C0205296 denotes natural
E9-ab-3 592-604 cui:C0596402 denotes cytotoxicity
E1-ab-4 606-617 cui:C0687133 denotes Interaction
E2-ab-4 626-640 cui:C0021027 denotes immunoglobulin
E3-ab-4 646-656 cui:C1519595 denotes transcript
E4-ab-4 659-668 cui:C0023516 denotes leukocyte
E5-ab-4 677-685 cui:C0597357 denotes receptor
E6-ab-4 691-694 entrez:84662 denotes NKL
E7-ab-4 695-700 cui:C0007634 denotes cells
E8-ab-4 705-712 entrez:3106 denotes HLA-B27
E9-ab-4 716-728 cui:C0221284 denotes target cells
E10-ab-4 755-758 entrez:84662 denotes NKL
E11-ab-4 759-766 cui:C0205296 denotes natural
E12-ab-4 767-779 cui:C0596402 denotes cytotoxicity
E13-ab-4 817-821 cui:C0812313 denotes JunB
E14-ab-4 823-827 cui:C1333571 denotes FosB
E15-ab-4 833-838 cui:C0085301 denotes c-Fos
E16-ab-4 839-852 cui:C0040649 denotes transcription
E17-ab-4 885-896 cui:C1148673 denotes DNA-binding
E18-ab-4 897-905 cui:C0439167 denotes activity
T6 606-617 INTERACTS_WITH denotes Interaction
T7 606-617 INTERACTS_WITH denotes Interaction
T8 606-617 INTERACTS_WITH denotes Interaction
T9 688-690 LOCATION_OF denotes on
T10 713-715 LOCATION_OF denotes on
E1-ab-5 911-918 cui:C0008972 denotes studies
E2-ab-5 951-959 cui:C0439831 denotes rapidity
E3-ab-5 963-970 cui:C0022688 denotes NK cell
E4-ab-5 971-979 cui:C0086597 denotes mediated
E5-ab-5 980-985 cui:C1260960 denotes lysis
E6-ab-5 987-991 cui:C0085828 denotes AP-1
E7-ab-5 992-1012 cui:C0040648 denotes transcription factor
E8-ab-5 1037-1042 cui:C1279919 denotes early
E9-ab-5 1043-1048 cui:C1306673 denotes stage
E10-ab-5 1052-1059 cui:C0022688 denotes NK cell
E11-ab-5 1060-1069 cui:C1260960 denotes cytolytic
E12-ab-5 1088-1098 cui:C0425152 denotes engagement
E13-ab-5 1110-1120 cui:C0243077 denotes inhibitory
E14-ab-5 1102-1130 cui:C0382839 denotes NK cell inhibitory receptors
E15-ab-5 1135-1138 entrez:3133 denotes MHC
E16-ab-5 1139-1144 cui:C0456387 denotes class
E17-ab-5 1147-1156 cui:C0567416 denotes molecules
E18-ab-5 1169-1173 cui:C0442824 denotes very
E19-ab-5 1174-1179 cui:C1279919 denotes early
E20-ab-5 1194-1198 cui:C0085828 denotes AP-1
T11 1180-1190 STIMULATES denotes activation
R1 E4-ti-1 T1 subjectOf AP-1,expression
R2 E7-ti-1 T1 objectOf human NK cell line,expression
R3 E2-ab-1 T2 subjectOf cytotoxicity,mechanism
R4 E7-ab-1 T2 objectOf lysis,mechanism
R5 E14-ab-2 T3 subjectOf JunB,transcription factor genes such as JunB
R6 E13-ab-2 T3 objectOf transcription factor genes,transcription factor genes such as JunB
R7 E15-ab-2 T4 subjectOf FosB,transcription factor genes such as JunB
R8 E13-ab-2 T4 objectOf transcription factor genes,transcription factor genes such as JunB
R9 E4-ab-2 T5 subjectOf assays,messenger assays
R10 E3-ab-2 T5 objectOf messenger,messenger assays
R11 E14-ab-4 T6 subjectOf FosB,Interaction
R12 E2-ab-4 T6 objectOf immunoglobulin,Interaction
R13 E15-ab-4 T7 subjectOf c-Fos,Interaction
R14 E2-ab-4 T7 objectOf immunoglobulin,Interaction
R15 E13-ab-4 T8 subjectOf JunB,Interaction
R16 E2-ab-4 T8 objectOf immunoglobulin,Interaction
R17 E7-ab-4 T9 subjectOf cells,on
R18 E2-ab-4 T9 objectOf immunoglobulin,on
R19 E9-ab-4 T10 subjectOf target cells,on
R20 E8-ab-4 T10 objectOf HLA-B27,on
R21 E7-ab-5 T11 subjectOf transcription factor,activation
R22 E20-ab-5 T11 objectOf AP-1,activation

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-100 Sentence denotes Engagement of natural cytotoxicity programs regulates AP-1 expression in the NKL human NK cell line.
S2 101-177 Sentence denotes NK cell cytotoxicity is a fast and efficient mechanism of target cell lysis.
S3 178-447 Sentence denotes Using transcription analysis, such as multiplex messenger assays, we show here that natural cytotoxicity exerted by the human NKL cell line correlates with mRNA accumulation of very early activator protein (AP)-1 transcription factor genes such as JunB, FosB and c-Fos.
S4 448-605 Sentence denotes In addition, DNA-binding activities of Jun-Fos heterodimers were observed by electrophoretic mobility shift assays during the course of natural cytotoxicity.
S5 606-906 Sentence denotes Interaction between immunoglobulin-like transcript-2/leukocyte Ig-like receptor 1 on NKL cells and HLA-B27 on target cells leads to an impairment of NKL natural cytotoxicity, which correlates with an absence of JunB, FosB, and c-Fos transcription, as well as an absence of their DNA-binding activity.
S6 907-1199 Sentence denotes Our studies thus indicate that, despite the rapidity of NK cell-mediated lysis, AP-1 transcription factor is activated during the early stage of NK cell cytolytic programs and that engagement of NK cell inhibitory receptors for MHC class I molecules impairs the very early activation of AP-1.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 262-282 NP denotes natural cytotoxicity
C2 355-446 NP denotes very early activator protein (AP)-1 transcription factor genes such as JunB, FosB and c-Fos
C3 584-604 NP denotes natural cytotoxicity
C4 738-779 NP denotes an impairment of NKL natural cytotoxicity
C5 781-786 NP denotes which
C6 879-884 NP denotes their
C7 987-1012 NP denotes AP-1 transcription factor
C8 1194-1198 NP denotes AP-1
R1 C3 C1 coref-ident natural cytotoxicity,natural cytotoxicity
R2 C5 C4 coref-relat which,an impairment of NKL natural cytotoxicity
R3 C6 C2 coref-pron their,"very early activator protein (AP)-1 transcription factor genes such as JunB, FosB and c-Fos"
R4 C8 C7 coref-ident AP-1,AP-1 transcription factor

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 14-43 other_name denotes natural cytotoxicity programs
T2 54-58 protein_molecule denotes AP-1
T3 77-99 cell_line denotes NKL human NK cell line
T4 101-121 other_name denotes NK cell cytotoxicity
T5 159-176 other_name denotes target cell lysis
T6 184-206 other_name denotes transcription analysis
T7 216-242 other_name denotes multiplex messenger assays
T8 262-282 other_name denotes natural cytotoxicity
T9 298-317 cell_line denotes human NKL cell line
T10 334-351 other_name denotes mRNA accumulation
T11 355-390 protein_molecule denotes very early activator protein (AP)-1
T12 391-417 DNA_family_or_group denotes transcription factor genes
T13 426-430 DNA_domain_or_region denotes JunB
T14 432-436 DNA_domain_or_region denotes FosB
T15 441-446 DNA_domain_or_region denotes c-Fos
T16 461-483 other_name denotes DNA-binding activities
T17 487-507 protein_complex denotes Jun-Fos heterodimers
T18 525-562 other_name denotes electrophoretic mobility shift assays
T19 584-604 other_name denotes natural cytotoxicity
T20 626-687 protein_complex denotes immunoglobulin-like transcript-2/leukocyte Ig-like receptor 1
T21 691-700 cell_type denotes NKL cells
T22 705-712 protein_molecule denotes HLA-B27
T23 716-728 cell_type denotes target cells
T24 759-779 other_name denotes natural cytotoxicity
T25 963-985 other_name denotes NK cell-mediated lysis
T26 987-1012 protein_molecule denotes AP-1 transcription factor
T27 1052-1078 other_name denotes NK cell cytolytic programs
T28 1102-1130 protein_family_or_group denotes NK cell inhibitory receptors
T29 1135-1156 protein_family_or_group denotes MHC class I molecules
T30 1194-1198 protein_molecule denotes AP-1

metamap-sample

Id Subject Object Predicate Lexical cue
T1 88-90 C0022688 denotes K
T2 55-59 C0085828 denotes P-1
T3 1071-1079 C0376691 denotes rograms
T4 36-44 C0376691 denotes rograms
T5 760-767 C0205296 denotes atural
T6 585-592 C0205296 denotes atural
T7 263-270 C0205296 denotes atural
T8 15-22 C0205296 denotes atural
T9 768-780 C0596402 denotes ytotoxicity,
T10 593-605 C0596402 denotes ytotoxicity.
T11 271-283 C0596402 denotes ytotoxicity
T12 23-35 C0596402 denotes ytotoxicity
T13 1089-1099 C0425152 denotes ngagement
T14 1-11 C0425152 denotes ngagement
T15 60-70 C0185117 denotes xpression
T16 840-853 C0040649 denotes ranscription,
T17 185-198 C0040649 denotes ranscription
T18 1136-1157 C0019629 denotes HC class I molecules
T19 670-672 C0021027 denotes g-
T20 128-132 C0015663 denotes ast
T21 199-207 C1524024 denotes nalysis,
T22 526-563 C0949632 denotes lectrophoretic mobility shift assays
T23 335-338 C0035696 denotes RNA
T24 1111-1120 C3463820 denotes nhibitory
T25 660-669 C0023516 denotes eukocyte
T26 1061-1070 C1536403 denotes ytolytic
T27 981-986 C1536403 denotes ysis,
T28 172-177 C1536403 denotes ysis.
T29 993-1013 C0040648 denotes ranscription factor
T30 886-889 C0012854 denotes NA-
T31 834-839 C0087140 denotes -Fos
T32 442-447 C0087140 denotes -Fos.
T33 1017-1026 C1879547 denotes ctivated
T34 1181-1191 C1879547 denotes ctivation
T35 1175-1180 C1279919 denotes arly
T36 361-366 C1279919 denotes arly
T37 1170-1174 C0442824 denotes ery
T38 356-360 C0442824 denotes ery
T39 886-897 C1148673 denotes NA-binding
T40 462-473 C1148673 denotes NA-binding
T41 452-460 C1883712 denotes ddition,
T42 575-581 C0750729 denotes ourse
T43 102-122 C2984255 denotes K cell cytotoxicity
T44 248-252 C1547282 denotes how
T45 179-184 C1524063 denotes sing
T46 952-960 C0439831 denotes apidity
T47 696-701 C0007634 denotes ells
T48 912-919 C0947630 denotes tudies
T49 678-686 C0597357 denotes eceptor
T50 237-243 C0243073 denotes ssays,
T51 392-417 C0812327 denotes ranscription factor genes
T52 147-156 C0441712 denotes echanism
T53 514-522 C1441672 denotes bserved
T54 474-484 C0441655 denotes ctivities
T55 284-291 C0015264 denotes xerted
T56 730-735 C2348269 denotes eads
T57 742-752 C0684336 denotes mpairment
T58 607-618 C1704675 denotes nteraction
T59 227-236 C0169911 denotes essenger
T60 972-980 C0127400 denotes ediated
T61 160-171 C0221284 denotes arget cell
T62 890-906 C2266866 denotes inding activity.
T63 717-722 C1521840 denotes arget
T64 137-146 C0442799 denotes fficient
T65 898-906 C1561536 denotes ctivity.
T66 488-491 C3536909 denotes un-